RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PRELID3AQ96N28 172 aa12.84□□□□□ -0.35
CCDC9-205ENST00000600117 Q9H8V8 135 aa12.84□□□□□ -0.35
CCDC9-205ENST00000600117 PHOX2AO14813 284 aa12.83□□□□□ -0.36
CCDC9-205ENST00000600117 APCSP02743 223 aa12.83□□□□□ -0.36
CCDC9-205ENST00000600117 MT-ND6P03923 174 aa12.83□□□□□ -0.36
CCDC9-205ENST00000600117 DEFB104AQ8WTQ1 72 aa12.83□□□□□ -0.36
CCDC9-205ENST00000600117 C20orf78Q9BR46 151 aa12.83□□□□□ -0.36
CCDC9-205ENST00000600117 TRAV8-6A0A0B4J262 113 aa12.82□□□□□ -0.36
CCDC9-205ENST00000600117 TRBV27A0A0K0K1C4 114 aa12.82□□□□□ -0.36
CCDC9-205ENST00000600117 SIVA1O15304 175 aa12.82□□□□□ -0.36
CCDC9-205ENST00000600117 SCO1O75880 301 aa12.82□□□□□ -0.36
CCDC9-205ENST00000600117 RPL32P62910 135 aaKnown RBP12.82□□□□□ -0.36
CCDC9-205ENST00000600117 KIAA1644Q3SXP7 199 aa12.82□□□□□ -0.36
CCDC9-205ENST00000600117 MRPL18Q9H0U6 180 aaKnown RBP12.82□□□□□ -0.36
CCDC9-205ENST00000600117 IGLV2-18A0A075B6J9 118 aa12.81□□□□□ -0.36
CCDC9-205ENST00000600117 I3L3M4 83 aa12.81□□□□□ -0.36
CCDC9-205ENST00000600117 DNAH10OSP0CZ25 163 aa12.81□□□□□ -0.36
CCDC9-205ENST00000600117 COTL1Q14019 142 aa12.81□□□□□ -0.36
CCDC9-205ENST00000600117 IQCJQ1A5X6 159 aa12.81□□□□□ -0.36
CCDC9-205ENST00000600117 LAMTOR2Q9Y2Q5 125 aa12.81□□□□□ -0.36
CCDC9-205ENST00000600117 IGHV1-24A0A0C4DH33 117 aa12.8□□□□□ -0.36
CCDC9-205ENST00000600117 TSHBP01222 138 aa12.8□□□□□ -0.36
CCDC9-205ENST00000600117 PMCHP20382 165 aa12.8□□□□□ -0.36
CCDC9-205ENST00000600117 S100A1P23297 94 aa12.8□□□□□ -0.36
CCDC9-205ENST00000600117 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
CCDC9-205ENST00000600117 PRSS47A8MTI9 375 aa12.79□□□□□ -0.36
CCDC9-205ENST00000600117 VCYO14598 125 aa12.79□□□□□ -0.36
CCDC9-205ENST00000600117 NIT1Q86X76 327 aa12.79□□□□□ -0.36
CCDC9-205ENST00000600117 SMIM2Q9BVW6 85 aa12.79□□□□□ -0.36
CCDC9-205ENST00000600117 KRTAP1-5Q9BYS1 174 aa12.79□□□□□ -0.36
CCDC9-205ENST00000600117 TRBV25-1A0A075B6N4 114 aa12.78□□□□□ -0.36
CCDC9-205ENST00000600117 NBDYA0A0U1RRE5 68 aa12.78□□□□□ -0.36
CCDC9-205ENST00000600117 FABP9Q0Z7S8 132 aa12.78□□□□□ -0.36
CCDC9-205ENST00000600117 LINC01556Q5JQF7 62 aa12.78□□□□□ -0.36
CCDC9-205ENST00000600117 Q6ZR54 194 aa12.78□□□□□ -0.36
CCDC9-205ENST00000600117 Q8N3U1 123 aa12.78□□□□□ -0.36
CCDC9-205ENST00000600117 TRAPPC1Q9Y5R8 145 aa12.78□□□□□ -0.36
CCDC9-205ENST00000600117 COLCA2A8K830 154 aa12.77□□□□□ -0.37
CCDC9-205ENST00000600117 AMTP48728 403 aa12.77□□□□□ -0.37
CCDC9-205ENST00000600117 ALKBH7Q9BT30 221 aaPredicted RBP12.77□□□□□ -0.37
CCDC9-205ENST00000600117 LRP1BQ9NZR2 4599 aa12.77□□□□□ -0.37
CCDC9-205ENST00000600117 M0R2N4 97 aa12.76□□□□□ -0.37
CCDC9-205ENST00000600117 CHCHD5Q9BSY4 110 aa12.76□□□□□ -0.37
CCDC9-205ENST00000600117 TMEM243Q9BU79 118 aa12.76□□□□□ -0.37
CCDC9-205ENST00000600117 CHCHD7Q9BUK0 85 aa12.76□□□□□ -0.37
CCDC9-205ENST00000600117 RTL8CO15255 209 aa12.75□□□□□ -0.37
CCDC9-205ENST00000600117 ESDP10768 282 aa12.75□□□□□ -0.37
CCDC9-205ENST00000600117 MAP1LC3AQ9H492 121 aa12.75□□□□□ -0.37
CCDC9-205ENST00000600117 IGHV3-30P01768 117 aa12.74□□□□□ -0.37
CCDC9-205ENST00000600117 IGHV3-33P01772 117 aa12.74□□□□□ -0.37
CCDC9-205ENST00000600117 IGHV3-30-3P0DP02 117 aa12.74□□□□□ -0.37
CCDC9-205ENST00000600117 IGHV3-30-5P0DP03 117 aa12.74□□□□□ -0.37
CCDC9-205ENST00000600117 GAGE6Q13070 117 aa12.74□□□□□ -0.37
CCDC9-205ENST00000600117 TTC32Q5I0X7 151 aa12.74□□□□□ -0.37
CCDC9-205ENST00000600117 KIR2DL4Q99706 377 aa12.74□□□□□ -0.37
CCDC9-205ENST00000600117 LOC389332A0A1B0GUA5 103 aa12.73□□□□□ -0.37
CCDC9-205ENST00000600117 K7EP13 123 aa12.72□□□□□ -0.37
CCDC9-205ENST00000600117 FCER1GP30273 86 aa12.72□□□□□ -0.37
CCDC9-205ENST00000600117 MPV17L2Q567V2 206 aa12.72□□□□□ -0.37
CCDC9-205ENST00000600117 Q8N8P6 123 aa12.72□□□□□ -0.37
CCDC9-205ENST00000600117 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.71□□□□□ -0.37
CCDC9-205ENST00000600117 IGKV2-29A2NJV5 120 aaPredicted RBP12.71□□□□□ -0.37
CCDC9-205ENST00000600117 TCAPO15273 167 aa12.71□□□□□ -0.37
CCDC9-205ENST00000600117 RAB5AP20339 215 aa12.71□□□□□ -0.37
CCDC9-205ENST00000600117 PKIAP61925 76 aa12.71□□□□□ -0.37
CCDC9-205ENST00000600117 APOBP04114 4563 aaKnown RBP12.7□□□□□ -0.38
CCDC9-205ENST00000600117 A0A087WX48 190 aa12.7□□□□□ -0.38
CCDC9-205ENST00000600117 TMEM262E9PQX1 116 aa12.7□□□□□ -0.38
CCDC9-205ENST00000600117 RBX1P62877 108 aa12.7□□□□□ -0.38
CCDC9-205ENST00000600117 TRAV9-2A0A087WT02 112 aa12.69□□□□□ -0.38
CCDC9-205ENST00000600117 H7C423 109 aa12.69□□□□□ -0.38
CCDC9-205ENST00000600117 IFI27P40305 119 aaPredicted RBP12.69□□□□□ -0.38
CCDC9-205ENST00000600117 C10orf126Q8N4M7 172 aa12.69□□□□□ -0.38
CCDC9-205ENST00000600117 Q8N976 141 aa12.69□□□□□ -0.38
CCDC9-205ENST00000600117 NXT2Q9NPJ8 142 aaKnown RBP12.69□□□□□ -0.38
CCDC9-205ENST00000600117 A0A1B0GUV1 79 aa12.68□□□□□ -0.38
CCDC9-205ENST00000600117 IBA57-AS1B1ANH7 110 aa12.68□□□□□ -0.38
CCDC9-205ENST00000600117 UBE2L6O14933 153 aa12.68□□□□□ -0.38
CCDC9-205ENST00000600117 TRGC2P03986 189 aa12.68□□□□□ -0.38
CCDC9-205ENST00000600117 C18orf32Q8TCD1 76 aa12.68□□□□□ -0.38
CCDC9-205ENST00000600117 C20orf203Q8NBC4 194 aa12.67□□□□□ -0.38
CCDC9-205ENST00000600117 IGLV4-60A0A075B6I1 120 aa12.66□□□□□ -0.38
CCDC9-205ENST00000600117 FGF6P10767 208 aa12.66□□□□□ -0.38
CCDC9-205ENST00000600117 KLK12Q9UKR0 248 aa12.66□□□□□ -0.38
CCDC9-205ENST00000600117 LINC01546A6NGU7 62 aa12.65□□□□□ -0.38
CCDC9-205ENST00000600117 K7EMI3 77 aa12.65□□□□□ -0.38
CCDC9-205ENST00000600117 BTF3P20290 206 aaKnown RBP12.65□□□□□ -0.38
CCDC9-205ENST00000600117 LAGE3Q14657 143 aa12.65□□□□□ -0.38
CCDC9-205ENST00000600117 MRPL52Q86TS9 123 aaKnown RBP12.65□□□□□ -0.38
CCDC9-205ENST00000600117 C6orf223Q8N319 242 aa12.65□□□□□ -0.38
CCDC9-205ENST00000600117 PRSS3P2Q8NHM4 247 aa12.65□□□□□ -0.38
CCDC9-205ENST00000600117 DNAH5Q8TE73 4624 aa12.65□□□□□ -0.38
CCDC9-205ENST00000600117 DMBT1Q9UGM3 2413 aaPredicted RBP12.64□□□□□ -0.39
CCDC9-205ENST00000600117 ANGP03950 147 aaKnown RBP12.64□□□□□ -0.39
CCDC9-205ENST00000600117 ZNF25P17030 456 aaPredicted RBP12.63□□□□□ -0.39
CCDC9-205ENST00000600117 RPL39P62891 51 aaKnown RBP12.63□□□□□ -0.39
CCDC9-205ENST00000600117 C1orf134Q5TEV5 83 aa12.63□□□□□ -0.39
CCDC9-205ENST00000600117 AMMECR1LQ6DCA0 310 aa12.63□□□□□ -0.39
CCDC9-205ENST00000600117 RNASEKQ6P5S7 137 aaKnown RBP12.63□□□□□ -0.39
CCDC9-205ENST00000600117 URB1-AS1Q96HZ7 61 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms