RNA–Protein interactions for RNA: ENST00000599768.5

MAP1LC3B-209, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 5

Gene MAP1LC3B, Length 212 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-209ENST00000599768 USP17L23D6RBM5 183 aa11.33□□□□□ -0.6
MAP1LC3B-209ENST00000599768 GATCO43716 136 aaKnown RBP11.33□□□□□ -0.6
MAP1LC3B-209ENST00000599768 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
MAP1LC3B-209ENST00000599768 C20orf203Q8NBC4 194 aa11.33□□□□□ -0.6
MAP1LC3B-209ENST00000599768 TMEM243Q9BU79 118 aa11.33□□□□□ -0.6
MAP1LC3B-209ENST00000599768 TRAV26-2A0A0B4J265 109 aa11.32□□□□□ -0.6
MAP1LC3B-209ENST00000599768 A0A1B0GVG6 124 aa11.32□□□□□ -0.6
MAP1LC3B-209ENST00000599768 CEBPGP53567 150 aa11.32□□□□□ -0.6
MAP1LC3B-209ENST00000599768 IGLV4-60A0A075B6I1 120 aa11.31□□□□□ -0.6
MAP1LC3B-209ENST00000599768 A0A1B0GUV1 79 aa11.31□□□□□ -0.6
MAP1LC3B-209ENST00000599768 FOXA3P55318 350 aaPredicted RBP11.31□□□□□ -0.6
MAP1LC3B-209ENST00000599768 REG3AQ06141 175 aa11.31□□□□□ -0.6
MAP1LC3B-209ENST00000599768 SCXQ7RTU7 201 aa11.31□□□□□ -0.6
MAP1LC3B-209ENST00000599768 A8MWL6 223 aa11.3□□□□□ -0.6
MAP1LC3B-209ENST00000599768 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
MAP1LC3B-209ENST00000599768 CT83Q5H943 113 aa11.3□□□□□ -0.6
MAP1LC3B-209ENST00000599768 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
MAP1LC3B-209ENST00000599768 EIF5A2Q9GZV4 153 aaKnown RBP11.3□□□□□ -0.6
MAP1LC3B-209ENST00000599768 GFRA4Q9GZZ7 299 aa11.3□□□□□ -0.6
MAP1LC3B-209ENST00000599768 PLA2G2DQ9UNK4 145 aa11.3□□□□□ -0.6
MAP1LC3B-209ENST00000599768 PRSS1P07477 247 aa11.29□□□□□ -0.6
MAP1LC3B-209ENST00000599768 AMTP48728 403 aa11.29□□□□□ -0.6
MAP1LC3B-209ENST00000599768 COTL1Q14019 142 aa11.29□□□□□ -0.6
MAP1LC3B-209ENST00000599768 RPL39LQ96EH5 51 aaKnown RBP11.29□□□□□ -0.6
MAP1LC3B-209ENST00000599768 SMIM7Q9BQ49 75 aa11.29□□□□□ -0.6
MAP1LC3B-209ENST00000599768 IGLV10-54A0A075B6I4 117 aa11.28□□□□□ -0.6
MAP1LC3B-209ENST00000599768 SRP19P09132 144 aaKnown RBP11.28□□□□□ -0.6
MAP1LC3B-209ENST00000599768 SMIM15Q7Z3B0 74 aa11.28□□□□□ -0.6
MAP1LC3B-209ENST00000599768 LINC01551Q86U37 167 aa11.28□□□□□ -0.6
MAP1LC3B-209ENST00000599768 CHAC1Q9BUX1 264 aa11.28□□□□□ -0.6
MAP1LC3B-209ENST00000599768 TRAV8-4A0A0B4J246 113 aa11.27□□□□□ -0.61
MAP1LC3B-209ENST00000599768 UBE2L6O14933 153 aa11.27□□□□□ -0.61
MAP1LC3B-209ENST00000599768 ZNF727A8MUV8 499 aa11.26□□□□□ -0.61
MAP1LC3B-209ENST00000599768 DGAT2L7PQ6IED9 249 aa11.25□□□□□ -0.61
MAP1LC3B-209ENST00000599768 TEX261Q6UWH6 196 aa11.25□□□□□ -0.61
MAP1LC3B-209ENST00000599768 CIRBP-AS1Q8TBR5 109 aa11.25□□□□□ -0.61
MAP1LC3B-209ENST00000599768 TSKUQ8WUA8 353 aa11.25□□□□□ -0.61
MAP1LC3B-209ENST00000599768 HIGD1CA8MV81 97 aa11.24□□□□□ -0.61
MAP1LC3B-209ENST00000599768 NCR2O95944 276 aa11.24□□□□□ -0.61
MAP1LC3B-209ENST00000599768 OXTP01178 125 aa11.24□□□□□ -0.61
MAP1LC3B-209ENST00000599768 OSTCQ9NRP0 149 aa11.24□□□□□ -0.61
MAP1LC3B-209ENST00000599768 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
MAP1LC3B-209ENST00000599768 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
MAP1LC3B-209ENST00000599768 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
MAP1LC3B-209ENST00000599768 CLRN3Q8NCR9 226 aa11.23□□□□□ -0.61
MAP1LC3B-209ENST00000599768 BORCS7Q96B45 105 aa11.23□□□□□ -0.61
MAP1LC3B-209ENST00000599768 TRBV6-5A0A0K0K1A5 114 aa11.22□□□□□ -0.61
MAP1LC3B-209ENST00000599768 A0A1B0GUT8 65 aa11.22□□□□□ -0.61
MAP1LC3B-209ENST00000599768 FAM231BA6NCW3 169 aa11.22□□□□□ -0.61
MAP1LC3B-209ENST00000599768 TMEM191AQ9H0A3 160 aa11.22□□□□□ -0.61
MAP1LC3B-209ENST00000599768 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.61
MAP1LC3B-209ENST00000599768 APCSP02743 223 aa11.21□□□□□ -0.61
MAP1LC3B-209ENST00000599768 RNF185Q96GF1 192 aa11.21□□□□□ -0.61
MAP1LC3B-209ENST00000599768 V9GYV3 84 aa11.21□□□□□ -0.61
MAP1LC3B-209ENST00000599768 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
MAP1LC3B-209ENST00000599768 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
MAP1LC3B-209ENST00000599768 C9JQL5 133 aa11.2□□□□□ -0.62
MAP1LC3B-209ENST00000599768 H7C423 109 aa11.2□□□□□ -0.62
MAP1LC3B-209ENST00000599768 I3L3M4 83 aa11.2□□□□□ -0.62
MAP1LC3B-209ENST00000599768 KRTAP10-4P60372 401 aaPredicted RBP11.2□□□□□ -0.62
MAP1LC3B-209ENST00000599768 ISOC2Q96AB3 205 aa11.2□□□□□ -0.62
MAP1LC3B-209ENST00000599768 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
MAP1LC3B-209ENST00000599768 FGF6P10767 208 aa11.19□□□□□ -0.62
MAP1LC3B-209ENST00000599768 RAB4AP20338 218 aa11.19□□□□□ -0.62
MAP1LC3B-209ENST00000599768 CNBPP62633 177 aaKnown RBP11.19□□□□□ -0.62
MAP1LC3B-209ENST00000599768 RPL23P62829 140 aaKnown RBP11.19□□□□□ -0.62
MAP1LC3B-209ENST00000599768 TMEM241Q24JQ0 296 aa11.19□□□□□ -0.62
MAP1LC3B-209ENST00000599768 FAM74A3Q4VXF1 159 aa11.19□□□□□ -0.62
MAP1LC3B-209ENST00000599768 AMMECR1LQ6DCA0 310 aa11.19□□□□□ -0.62
MAP1LC3B-209ENST00000599768 IGKV3OR2-268A0A0C4DH90 116 aa11.18□□□□□ -0.62
MAP1LC3B-209ENST00000599768 PMCHP20382 165 aa11.18□□□□□ -0.62
MAP1LC3B-209ENST00000599768 RPS10P46783 165 aaKnown RBP11.18□□□□□ -0.62
MAP1LC3B-209ENST00000599768 RNASEKQ6P5S7 137 aaKnown RBP11.18□□□□□ -0.62
MAP1LC3B-209ENST00000599768 SDIM1Q6ZPB5 146 aa11.18□□□□□ -0.62
MAP1LC3B-209ENST00000599768 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
MAP1LC3B-209ENST00000599768 ST20Q9HBF5 79 aa11.18□□□□□ -0.62
MAP1LC3B-209ENST00000599768 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.18□□□□□ -0.62
MAP1LC3B-209ENST00000599768 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
MAP1LC3B-209ENST00000599768 PANO1I0J062 215 aa11.17□□□□□ -0.62
MAP1LC3B-209ENST00000599768 TSHBP01222 138 aa11.17□□□□□ -0.62
MAP1LC3B-209ENST00000599768 SLPIP03973 132 aa11.17□□□□□ -0.62
MAP1LC3B-209ENST00000599768 ESDP10768 282 aa11.17□□□□□ -0.62
MAP1LC3B-209ENST00000599768 SRSF3P84103 164 aaKnown RBP11.17□□□□□ -0.62
MAP1LC3B-209ENST00000599768 AMN1Q8IY45 258 aa11.17□□□□□ -0.62
MAP1LC3B-209ENST00000599768 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
MAP1LC3B-209ENST00000599768 PKHD1L1Q86WI1 4243 aa11.17□□□□□ -0.62
MAP1LC3B-209ENST00000599768 POLR2KP53803 58 aaKnown RBP11.16□□□□□ -0.62
MAP1LC3B-209ENST00000599768 RIGQ13278 110 aa11.16□□□□□ -0.62
MAP1LC3B-209ENST00000599768 C15orf56Q8N910 161 aa11.16□□□□□ -0.62
MAP1LC3B-209ENST00000599768 TMEM242Q9NWH2 141 aa11.16□□□□□ -0.62
MAP1LC3B-209ENST00000599768 FAT3Q8TDW7 4589 aa11.16□□□□□ -0.62
MAP1LC3B-209ENST00000599768 ZNF25P17030 456 aaPredicted RBP11.15□□□□□ -0.62
MAP1LC3B-209ENST00000599768 ADIRFQ15847 76 aa11.15□□□□□ -0.62
MAP1LC3B-209ENST00000599768 CHCHD10Q8WYQ3 142 aaPredicted RBP11.15□□□□□ -0.62
MAP1LC3B-209ENST00000599768 AP5S1Q9NUS5 200 aa11.15□□□□□ -0.62
MAP1LC3B-209ENST00000599768 NAT8Q9UHE5 227 aa11.15□□□□□ -0.62
MAP1LC3B-209ENST00000599768 TRBV27A0A0K0K1C4 114 aa11.14□□□□□ -0.63
MAP1LC3B-209ENST00000599768 SMKR1H3BMG3 65 aa11.14□□□□□ -0.63
MAP1LC3B-209ENST00000599768 NAT8BQ9UHF3 227 aa11.14□□□□□ -0.63
MAP1LC3B-209ENST00000599768 CIRBPQ14011 172 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 314.2 ms