RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 Q9HAA7 133 aa11.68□□□□□ -0.54
USHBP1-209ENST00000598570 TMEM218A2RU14 115 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 SDHAF1A6NFY7 115 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 TMEM262E9PQX1 116 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 H7C423 109 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 COTL1Q14019 142 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 KRTAP26-1Q6PEX3 210 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 NRACQ8N912 160 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 Q8N976 141 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 ANAPC16Q96DE5 110 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 RMI2Q96E14 147 aa11.67□□□□□ -0.54
USHBP1-209ENST00000598570 TRBV24-1A0A075B6N3 115 aa11.66□□□□□ -0.54
USHBP1-209ENST00000598570 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
USHBP1-209ENST00000598570 RPS10P46783 165 aaKnown RBP11.66□□□□□ -0.54
USHBP1-209ENST00000598570 C20orf203Q8NBC4 194 aa11.66□□□□□ -0.54
USHBP1-209ENST00000598570 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
USHBP1-209ENST00000598570 TMEM70Q9BUB7 260 aa11.66□□□□□ -0.54
USHBP1-209ENST00000598570 I3L3M4 83 aa11.65□□□□□ -0.54
USHBP1-209ENST00000598570 PPP1R17O96001 155 aa11.65□□□□□ -0.54
USHBP1-209ENST00000598570 MT-ND4LP03901 98 aa11.65□□□□□ -0.54
USHBP1-209ENST00000598570 ESDP10768 282 aa11.65□□□□□ -0.54
USHBP1-209ENST00000598570 ADCYAP1P18509 176 aa11.65□□□□□ -0.54
USHBP1-209ENST00000598570 RPL32P62910 135 aaKnown RBP11.65□□□□□ -0.54
USHBP1-209ENST00000598570 GAGE6Q13070 117 aa11.65□□□□□ -0.54
USHBP1-209ENST00000598570 MIAQ16674 131 aa11.65□□□□□ -0.54
USHBP1-209ENST00000598570 ATP5L2Q7Z4Y8 100 aa11.65□□□□□ -0.54
USHBP1-209ENST00000598570 Q8N814 137 aa11.65□□□□□ -0.54
USHBP1-209ENST00000598570 PSCAO43653 123 aa11.64□□□□□ -0.55
USHBP1-209ENST00000598570 WFDC2Q14508 124 aa11.64□□□□□ -0.55
USHBP1-209ENST00000598570 MRPL51Q4U2R6 128 aaKnown RBP11.64□□□□□ -0.55
USHBP1-209ENST00000598570 C10orf91Q5T1B1 145 aa11.64□□□□□ -0.55
USHBP1-209ENST00000598570 UBE2WQ96B02 151 aa11.64□□□□□ -0.55
USHBP1-209ENST00000598570 ST20Q9HBF5 79 aa11.64□□□□□ -0.55
USHBP1-209ENST00000598570 TSHBP01222 138 aa11.63□□□□□ -0.55
USHBP1-209ENST00000598570 S100A8P05109 93 aa11.63□□□□□ -0.55
USHBP1-209ENST00000598570 AMTP48728 403 aa11.63□□□□□ -0.55
USHBP1-209ENST00000598570 HBBP68871 147 aa11.63□□□□□ -0.55
USHBP1-209ENST00000598570 IMMP2LQ96T52 175 aa11.63□□□□□ -0.55
USHBP1-209ENST00000598570 SEC11CQ9BY50 192 aa11.63□□□□□ -0.55
USHBP1-209ENST00000598570 IGLV4-60A0A075B6I1 120 aa11.62□□□□□ -0.55
USHBP1-209ENST00000598570 ANGP03950 147 aaKnown RBP11.62□□□□□ -0.55
USHBP1-209ENST00000598570 LINC00269Q8N2A0 174 aa11.62□□□□□ -0.55
USHBP1-209ENST00000598570 C20orf78Q9BR46 151 aa11.62□□□□□ -0.55
USHBP1-209ENST00000598570 APOBP04114 4563 aaKnown RBP11.61□□□□□ -0.55
USHBP1-209ENST00000598570 VCYO14598 125 aa11.61□□□□□ -0.55
USHBP1-209ENST00000598570 CAMPP49913 170 aa11.61□□□□□ -0.55
USHBP1-209ENST00000598570 HSPG2P98160 4391 aa11.6□□□□□ -0.55
USHBP1-209ENST00000598570 TRAV8-4A0A0B4J246 113 aa11.6□□□□□ -0.55
USHBP1-209ENST00000598570 F8W036 122 aa11.6□□□□□ -0.55
USHBP1-209ENST00000598570 IGKV2D-24A0A075B6R9 120 aa11.59□□□□□ -0.55
USHBP1-209ENST00000598570 PHOX2AO14813 284 aa11.59□□□□□ -0.55
USHBP1-209ENST00000598570 PPBPP02775 128 aa11.59□□□□□ -0.55
USHBP1-209ENST00000598570 PMCHP20382 165 aa11.59□□□□□ -0.55
USHBP1-209ENST00000598570 SUMO2P61956 95 aaKnown RBP11.59□□□□□ -0.55
USHBP1-209ENST00000598570 REG3AQ06141 175 aa11.59□□□□□ -0.55
USHBP1-209ENST00000598570 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
USHBP1-209ENST00000598570 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
USHBP1-209ENST00000598570 PRSS47A8MTI9 375 aa11.58□□□□□ -0.56
USHBP1-209ENST00000598570 SMKR1H3BMG3 65 aa11.58□□□□□ -0.56
USHBP1-209ENST00000598570 APCSP02743 223 aa11.58□□□□□ -0.56
USHBP1-209ENST00000598570 ZNF25P17030 456 aaPredicted RBP11.58□□□□□ -0.56
USHBP1-209ENST00000598570 KRTAP10-1P60331 282 aa11.58□□□□□ -0.56
USHBP1-209ENST00000598570 MRPL54Q6P161 138 aaKnown RBP11.58□□□□□ -0.56
USHBP1-209ENST00000598570 C1orf43Q9BWL3 253 aa11.58□□□□□ -0.56
USHBP1-209ENST00000598570 KRTAP17-1Q9BYP8 105 aa11.58□□□□□ -0.56
USHBP1-209ENST00000598570 CTDSP1Q9GZU7 261 aa11.58□□□□□ -0.56
USHBP1-209ENST00000598570 TMEM242Q9NWH2 141 aa11.58□□□□□ -0.56
USHBP1-209ENST00000598570 CRPP02741 224 aa11.57□□□□□ -0.56
USHBP1-209ENST00000598570 FUSP35637 526 aaKnown RBP eCLIP11.57□□□□□ -0.56
USHBP1-209ENST00000598570 COMMD7Q86VX2 200 aa11.57□□□□□ -0.56
USHBP1-209ENST00000598570 DEFB104AQ8WTQ1 72 aa11.57□□□□□ -0.56
USHBP1-209ENST00000598570 CARHSP1Q9Y2V2 147 aaKnown RBP11.57□□□□□ -0.56
USHBP1-209ENST00000598570 FGF6P10767 208 aa11.56□□□□□ -0.56
USHBP1-209ENST00000598570 GCSHP23434 173 aa11.56□□□□□ -0.56
USHBP1-209ENST00000598570 BTF3L4Q96K17 158 aa11.56□□□□□ -0.56
USHBP1-209ENST00000598570 CSDC2Q9Y534 153 aaKnown RBP11.56□□□□□ -0.56
USHBP1-209ENST00000598570 UBE2L6O14933 153 aa11.55□□□□□ -0.56
USHBP1-209ENST00000598570 TNFRSF6BO95407 300 aa11.55□□□□□ -0.56
USHBP1-209ENST00000598570 CKS2P33552 79 aa11.55□□□□□ -0.56
USHBP1-209ENST00000598570 TRAV9-1A0A075B6T8 112 aa11.54□□□□□ -0.56
USHBP1-209ENST00000598570 XGP55808 180 aa11.54□□□□□ -0.56
USHBP1-209ENST00000598570 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.53□□□□□ -0.56
USHBP1-209ENST00000598570 IGLV5-52A0A0A0MRZ9 124 aa11.53□□□□□ -0.56
USHBP1-209ENST00000598570 IGKV2-29A2NJV5 120 aaPredicted RBP11.53□□□□□ -0.56
USHBP1-209ENST00000598570 D6R8Y8 96 aa11.53□□□□□ -0.56
USHBP1-209ENST00000598570 TCAPO15273 167 aa11.53□□□□□ -0.56
USHBP1-209ENST00000598570 NPYP01303 97 aa11.52□□□□□ -0.57
USHBP1-209ENST00000598570 C14orf177Q52M58 125 aa11.52□□□□□ -0.57
USHBP1-209ENST00000598570 Q6ZSA8 131 aa11.52□□□□□ -0.57
USHBP1-209ENST00000598570 ORMDL3Q8N138 153 aa11.52□□□□□ -0.57
USHBP1-209ENST00000598570 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
USHBP1-209ENST00000598570 TIMM21Q9BVV7 248 aa11.52□□□□□ -0.57
USHBP1-209ENST00000598570 CDC42SE2Q9NRR3 84 aa11.52□□□□□ -0.57
USHBP1-209ENST00000598570 LAMTOR2Q9Y2Q5 125 aa11.52□□□□□ -0.57
USHBP1-209ENST00000598570 PCLOQ9Y6V0 5065 aa11.51□□□□□ -0.57
USHBP1-209ENST00000598570 C7orf77A4D0Y5 90 aa11.51□□□□□ -0.57
USHBP1-209ENST00000598570 LECT2O14960 151 aa11.51□□□□□ -0.57
USHBP1-209ENST00000598570 TMEM136Q6ZRR5 245 aa11.51□□□□□ -0.57
USHBP1-209ENST00000598570 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
USHBP1-209ENST00000598570 DNAH8Q96JB1 4490 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms