RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 NAT8Q9UHE5 227 aa10.97□□□□□ -0.65
USHBP1-208ENST00000598309 V9GYV3 84 aa10.97□□□□□ -0.65
USHBP1-208ENST00000598309 A0A1B0GUV1 79 aa10.96□□□□□ -0.65
USHBP1-208ENST00000598309 RPL23P62829 140 aaKnown RBP10.96□□□□□ -0.65
USHBP1-208ENST00000598309 NCR2O95944 276 aa10.95□□□□□ -0.66
USHBP1-208ENST00000598309 AMTP48728 403 aa10.95□□□□□ -0.66
USHBP1-208ENST00000598309 C14orf177Q52M58 125 aa10.95□□□□□ -0.66
USHBP1-208ENST00000598309 LINC00269Q8N2A0 174 aa10.95□□□□□ -0.66
USHBP1-208ENST00000598309 RPL39LQ96EH5 51 aaKnown RBP10.95□□□□□ -0.66
USHBP1-208ENST00000598309 TMEM191AQ9H0A3 160 aa10.95□□□□□ -0.66
USHBP1-208ENST00000598309 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.94□□□□□ -0.66
USHBP1-208ENST00000598309 UBE2L6O14933 153 aa10.94□□□□□ -0.66
USHBP1-208ENST00000598309 SRSF3P84103 164 aaKnown RBP10.94□□□□□ -0.66
USHBP1-208ENST00000598309 ADIRFQ15847 76 aa10.94□□□□□ -0.66
USHBP1-208ENST00000598309 C20orf203Q8NBC4 194 aa10.94□□□□□ -0.66
USHBP1-208ENST00000598309 ABCA13Q86UQ4 5058 aa10.93□□□□□ -0.66
USHBP1-208ENST00000598309 TRBV6-5A0A0K0K1A5 114 aa10.93□□□□□ -0.66
USHBP1-208ENST00000598309 REG3AQ06141 175 aa10.93□□□□□ -0.66
USHBP1-208ENST00000598309 RIGQ13278 110 aa10.93□□□□□ -0.66
USHBP1-208ENST00000598309 CLPSL2Q6UWE3 100 aa10.93□□□□□ -0.66
USHBP1-208ENST00000598309 NUP35Q8NFH5 326 aa10.93□□□□□ -0.66
USHBP1-208ENST00000598309 NAT8BQ9UHF3 227 aa10.93□□□□□ -0.66
USHBP1-208ENST00000598309 SDHAF1A6NFY7 115 aa10.92□□□□□ -0.66
USHBP1-208ENST00000598309 HLA-DQA1P01909 254 aa10.92□□□□□ -0.66
USHBP1-208ENST00000598309 MRAP2Q96G30 205 aa10.92□□□□□ -0.66
USHBP1-208ENST00000598309 IGLV4-60A0A075B6I1 120 aa10.91□□□□□ -0.66
USHBP1-208ENST00000598309 TRAV8-4A0A0B4J246 113 aa10.91□□□□□ -0.66
USHBP1-208ENST00000598309 EPM2AB3EWF7 344 aa10.91□□□□□ -0.66
USHBP1-208ENST00000598309 APCSP02743 223 aa10.91□□□□□ -0.66
USHBP1-208ENST00000598309 KRTAP26-1Q6PEX3 210 aa10.91□□□□□ -0.66
USHBP1-208ENST00000598309 Q6ZSA8 131 aa10.91□□□□□ -0.66
USHBP1-208ENST00000598309 RNF185Q96GF1 192 aa10.91□□□□□ -0.66
USHBP1-208ENST00000598309 SMIM27A0A1W2PRY6 76 aa10.9□□□□□ -0.66
USHBP1-208ENST00000598309 H7C423 109 aa10.9□□□□□ -0.66
USHBP1-208ENST00000598309 I3L3M4 83 aa10.9□□□□□ -0.66
USHBP1-208ENST00000598309 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
USHBP1-208ENST00000598309 ST20Q9HBF5 79 aa10.9□□□□□ -0.66
USHBP1-208ENST00000598309 USP17L23D6RBM5 183 aa10.89□□□□□ -0.67
USHBP1-208ENST00000598309 RAB4AP20338 218 aa10.89□□□□□ -0.67
USHBP1-208ENST00000598309 AMN1Q8IY45 258 aa10.89□□□□□ -0.67
USHBP1-208ENST00000598309 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
USHBP1-208ENST00000598309 A0A1B0GW15 77 aa10.87□□□□□ -0.67
USHBP1-208ENST00000598309 GAS8-AS1O95177 125 aa10.87□□□□□ -0.67
USHBP1-208ENST00000598309 PPP1R17O96001 155 aa10.87□□□□□ -0.67
USHBP1-208ENST00000598309 PMCHP20382 165 aa10.87□□□□□ -0.67
USHBP1-208ENST00000598309 RPS10P46783 165 aaKnown RBP10.87□□□□□ -0.67
USHBP1-208ENST00000598309 Q5VSD8 79 aa10.87□□□□□ -0.67
USHBP1-208ENST00000598309 AMMECR1LQ6DCA0 310 aa10.87□□□□□ -0.67
USHBP1-208ENST00000598309 IGLV10-54A0A075B6I4 117 aa10.86□□□□□ -0.67
USHBP1-208ENST00000598309 TRBV27A0A0K0K1C4 114 aa10.86□□□□□ -0.67
USHBP1-208ENST00000598309 ZNF25P17030 456 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-208ENST00000598309 POLR2KP53803 58 aaKnown RBP10.86□□□□□ -0.67
USHBP1-208ENST00000598309 RAB14P61106 215 aa10.86□□□□□ -0.67
USHBP1-208ENST00000598309 HAMPP81172 84 aa10.86□□□□□ -0.67
USHBP1-208ENST00000598309 TSHBP01222 138 aa10.85□□□□□ -0.67
USHBP1-208ENST00000598309 FGF6P10767 208 aa10.85□□□□□ -0.67
USHBP1-208ENST00000598309 CLRN3Q8NCR9 226 aa10.85□□□□□ -0.67
USHBP1-208ENST00000598309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.84□□□□□ -0.67
USHBP1-208ENST00000598309 IGKV2-29A2NJV5 120 aaPredicted RBP10.84□□□□□ -0.67
USHBP1-208ENST00000598309 SMR3BP02814 79 aaPredicted RBP10.84□□□□□ -0.67
USHBP1-208ENST00000598309 PRSS1P07477 247 aa10.84□□□□□ -0.67
USHBP1-208ENST00000598309 ESDP10768 282 aa10.84□□□□□ -0.67
USHBP1-208ENST00000598309 LINC01620Q4KN68 170 aa10.84□□□□□ -0.67
USHBP1-208ENST00000598309 FAM104BQ5XKR9 115 aa10.84□□□□□ -0.67
USHBP1-208ENST00000598309 DGAT2L7PQ6IED9 249 aa10.84□□□□□ -0.67
USHBP1-208ENST00000598309 RNASEKQ6P5S7 137 aaKnown RBP10.84□□□□□ -0.67
USHBP1-208ENST00000598309 TMEM242Q9NWH2 141 aa10.84□□□□□ -0.67
USHBP1-208ENST00000598309 DNAH8Q96JB1 4490 aa10.83□□□□□ -0.68
USHBP1-208ENST00000598309 S100A8P05109 93 aa10.83□□□□□ -0.68
USHBP1-208ENST00000598309 NRACQ8N912 160 aa10.83□□□□□ -0.68
USHBP1-208ENST00000598309 FAT1Q14517 4588 aa10.83□□□□□ -0.68
USHBP1-208ENST00000598309 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
USHBP1-208ENST00000598309 VCYO14598 125 aa10.82□□□□□ -0.68
USHBP1-208ENST00000598309 PPP1R2P9O14990 202 aa10.82□□□□□ -0.68
USHBP1-208ENST00000598309 CAMPP49913 170 aa10.82□□□□□ -0.68
USHBP1-208ENST00000598309 SUMO2P61956 95 aaKnown RBP10.82□□□□□ -0.68
USHBP1-208ENST00000598309 BTF3L4Q96K17 158 aa10.82□□□□□ -0.68
USHBP1-208ENST00000598309 C7orf77A4D0Y5 90 aa10.81□□□□□ -0.68
USHBP1-208ENST00000598309 LINC00862A6NCI5 91 aa10.81□□□□□ -0.68
USHBP1-208ENST00000598309 SMKR1H3BMG3 65 aa10.81□□□□□ -0.68
USHBP1-208ENST00000598309 HBBP68871 147 aa10.81□□□□□ -0.68
USHBP1-208ENST00000598309 PNRC1Q12796 327 aaPredicted RBP10.81□□□□□ -0.68
USHBP1-208ENST00000598309 MRPL51Q4U2R6 128 aaKnown RBP10.81□□□□□ -0.68
USHBP1-208ENST00000598309 TMEM101Q96IK0 257 aa10.81□□□□□ -0.68
USHBP1-208ENST00000598309 A0A1B0GXF2 115 aa10.8□□□□□ -0.68
USHBP1-208ENST00000598309 F8W036 122 aa10.8□□□□□ -0.68
USHBP1-208ENST00000598309 CLLU1Q5K131 121 aa10.8□□□□□ -0.68
USHBP1-208ENST00000598309 SCXQ7RTU7 201 aa10.8□□□□□ -0.68
USHBP1-208ENST00000598309 MRPL52Q86TS9 123 aaKnown RBP10.8□□□□□ -0.68
USHBP1-208ENST00000598309 CHAC1Q9BUX1 264 aa10.8□□□□□ -0.68
USHBP1-208ENST00000598309 IGKV3OR2-268A0A0C4DH90 116 aa10.79□□□□□ -0.68
USHBP1-208ENST00000598309 GAGE12HA6NDE8 117 aa10.79□□□□□ -0.68
USHBP1-208ENST00000598309 CNBPP62633 177 aaKnown RBP10.79□□□□□ -0.68
USHBP1-208ENST00000598309 RPL32P62910 135 aaKnown RBP10.79□□□□□ -0.68
USHBP1-208ENST00000598309 MRPL54Q6P161 138 aaKnown RBP10.79□□□□□ -0.68
USHBP1-208ENST00000598309 ATP5L2Q7Z4Y8 100 aa10.79□□□□□ -0.68
USHBP1-208ENST00000598309 C9orf163Q8N9P6 203 aa10.79□□□□□ -0.68
USHBP1-208ENST00000598309 OR5A1Q8NGJ0 315 aa10.79□□□□□ -0.68
USHBP1-208ENST00000598309 CHCHD10Q8WYQ3 142 aaPredicted RBP10.79□□□□□ -0.68
USHBP1-208ENST00000598309 C20orf78Q9BR46 151 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 213.7 ms