RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 SULT1A2P50226 295 aa10.09□□□□□ -0.79
LINC02560-201ENST00000596379 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
LINC02560-201ENST00000596379 LYZL1Q6UWQ5 148 aa10.09□□□□□ -0.79
LINC02560-201ENST00000596379 SPACA4Q8TDM5 124 aa10.09□□□□□ -0.79
LINC02560-201ENST00000596379 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
LINC02560-201ENST00000596379 XKRY2A2RUG3 117 aa10.08□□□□□ -0.8
LINC02560-201ENST00000596379 IFNA1P01562 189 aa10.08□□□□□ -0.8
LINC02560-201ENST00000596379 GNG4P50150 75 aa10.08□□□□□ -0.8
LINC02560-201ENST00000596379 WDR73Q6P4I2 378 aa10.08□□□□□ -0.8
LINC02560-201ENST00000596379 TRAV1-1A0A0B4J248 108 aa10.07□□□□□ -0.8
LINC02560-201ENST00000596379 GAGE12HA6NDE8 117 aa10.07□□□□□ -0.8
LINC02560-201ENST00000596379 AMTP48728 403 aa10.07□□□□□ -0.8
LINC02560-201ENST00000596379 COTL1Q14019 142 aa10.07□□□□□ -0.8
LINC02560-201ENST00000596379 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
LINC02560-201ENST00000596379 PHOX2AO14813 284 aa10.06□□□□□ -0.8
LINC02560-201ENST00000596379 COX6A2Q02221 97 aa10.06□□□□□ -0.8
LINC02560-201ENST00000596379 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
LINC02560-201ENST00000596379 C9orf62Q8N4C0 152 aa10.06□□□□□ -0.8
LINC02560-201ENST00000596379 C15orf56Q8N910 161 aa10.06□□□□□ -0.8
LINC02560-201ENST00000596379 SMIM12Q96EX1 92 aa10.06□□□□□ -0.8
LINC02560-201ENST00000596379 PLAC8Q9NZF1 115 aa10.06□□□□□ -0.8
LINC02560-201ENST00000596379 MED9Q9NWA0 146 aa10.05□□□□□ -0.8
LINC02560-201ENST00000596379 TRBV20OR9-2A0A075B6H5 130 aa10.04□□□□□ -0.8
LINC02560-201ENST00000596379 RPS10P46783 165 aaKnown RBP10.04□□□□□ -0.8
LINC02560-201ENST00000596379 TWIST1Q15672 202 aa10.04□□□□□ -0.8
LINC02560-201ENST00000596379 HIGD2BQ4VC39 106 aa10.04□□□□□ -0.8
LINC02560-201ENST00000596379 NUDT10Q8NFP7 164 aa10.04□□□□□ -0.8
LINC02560-201ENST00000596379 PRSS3P2Q8NHM4 247 aa10.04□□□□□ -0.8
LINC02560-201ENST00000596379 C7orf33Q8WU49 177 aa10.04□□□□□ -0.8
LINC02560-201ENST00000596379 NUDT11Q96G61 164 aa10.04□□□□□ -0.8
LINC02560-201ENST00000596379 TEX46H3BTG2 121 aa10.03□□□□□ -0.8
LINC02560-201ENST00000596379 PDE6DO43924 150 aa10.03□□□□□ -0.8
LINC02560-201ENST00000596379 NDUFS6O75380 124 aaKnown RBP10.03□□□□□ -0.8
LINC02560-201ENST00000596379 MEF2BQ02080 365 aaPredicted RBP10.03□□□□□ -0.8
LINC02560-201ENST00000596379 MAJINQ3KP22 176 aa10.03□□□□□ -0.8
LINC02560-201ENST00000596379 GATD1Q8NB37 220 aa10.03□□□□□ -0.8
LINC02560-201ENST00000596379 GTSF1Q8WW33 167 aa10.03□□□□□ -0.8
LINC02560-201ENST00000596379 BIN3Q9NQY0 253 aa10.03□□□□□ -0.8
LINC02560-201ENST00000596379 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.81
LINC02560-201ENST00000596379 IGKV2-24A0A0C4DH68 120 aa10.02□□□□□ -0.81
LINC02560-201ENST00000596379 CTRLP40313 264 aa10.02□□□□□ -0.81
LINC02560-201ENST00000596379 AMMECR1LQ6DCA0 310 aa10.02□□□□□ -0.81
LINC02560-201ENST00000596379 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
LINC02560-201ENST00000596379 TNXBP22105 4242 aa10.02□□□□□ -0.81
LINC02560-201ENST00000596379 Q6ZNX1 250 aa10.01□□□□□ -0.81
LINC02560-201ENST00000596379 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
LINC02560-201ENST00000596379 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
LINC02560-201ENST00000596379 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
LINC02560-201ENST00000596379 RNASEKQ6P5S7 137 aaKnown RBP10□□□□□ -0.81
LINC02560-201ENST00000596379 STPG4Q8N801 248 aa10□□□□□ -0.81
LINC02560-201ENST00000596379 LYPD6BQ8NI32 183 aa10□□□□□ -0.81
LINC02560-201ENST00000596379 RPL39LQ96EH5 51 aaKnown RBP10□□□□□ -0.81
LINC02560-201ENST00000596379 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
LINC02560-201ENST00000596379 EIF5AL1Q6IS14 154 aaKnown RBP9.99□□□□□ -0.81
LINC02560-201ENST00000596379 RNASE7Q9H1E1 156 aaKnown RBP9.99□□□□□ -0.81
LINC02560-201ENST00000596379 RPP21Q9H633 154 aaKnown RBP9.99□□□□□ -0.81
LINC02560-201ENST00000596379 H7C423 109 aa9.98□□□□□ -0.81
LINC02560-201ENST00000596379 NCR2O95944 276 aa9.98□□□□□ -0.81
LINC02560-201ENST00000596379 BCL2P10415 239 aa9.98□□□□□ -0.81
LINC02560-201ENST00000596379 FGF6P10767 208 aa9.98□□□□□ -0.81
LINC02560-201ENST00000596379 FOXA3P55318 350 aaPredicted RBP9.98□□□□□ -0.81
LINC02560-201ENST00000596379 PRR3P79522 188 aaKnown RBP9.98□□□□□ -0.81
LINC02560-201ENST00000596379 OCC1Q8TAD7 63 aa9.98□□□□□ -0.81
LINC02560-201ENST00000596379 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
LINC02560-201ENST00000596379 A0A096LNI7 61 aa9.97□□□□□ -0.81
LINC02560-201ENST00000596379 APCSP02743 223 aa9.97□□□□□ -0.81
LINC02560-201ENST00000596379 FOXI1Q12951 378 aa9.97□□□□□ -0.81
LINC02560-201ENST00000596379 SDHAF1A6NFY7 115 aa9.96□□□□□ -0.82
LINC02560-201ENST00000596379 K7EN84 100 aa9.96□□□□□ -0.82
LINC02560-201ENST00000596379 ODF1Q14990 250 aa9.96□□□□□ -0.82
LINC02560-201ENST00000596379 SMIM15Q7Z3B0 74 aa9.96□□□□□ -0.82
LINC02560-201ENST00000596379 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
LINC02560-201ENST00000596379 XCL1P47992 114 aa9.95□□□□□ -0.82
LINC02560-201ENST00000596379 OR5A1Q8NGJ0 315 aa9.95□□□□□ -0.82
LINC02560-201ENST00000596379 LINC00526Q96FQ7 95 aa9.95□□□□□ -0.82
LINC02560-201ENST00000596379 I3L3M4 83 aa9.94□□□□□ -0.82
LINC02560-201ENST00000596379 PMCHP20382 165 aa9.94□□□□□ -0.82
LINC02560-201ENST00000596379 TEX261Q6UWH6 196 aa9.94□□□□□ -0.82
LINC02560-201ENST00000596379 ZNF25P17030 456 aaPredicted RBP9.93□□□□□ -0.82
LINC02560-201ENST00000596379 TMEM101Q96IK0 257 aa9.93□□□□□ -0.82
LINC02560-201ENST00000596379 BTF3L4Q96K17 158 aa9.93□□□□□ -0.82
LINC02560-201ENST00000596379 LINC00474Q9P2X8 69 aa9.93□□□□□ -0.82
LINC02560-201ENST00000596379 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
LINC02560-201ENST00000596379 CCL25O15444 150 aa9.92□□□□□ -0.82
LINC02560-201ENST00000596379 TAGLN2P37802 199 aaKnown RBP9.92□□□□□ -0.82
LINC02560-201ENST00000596379 LRP2P98164 4655 aa9.92□□□□□ -0.82
LINC02560-201ENST00000596379 IGHV1-58A0A0C4DH39 117 aa9.91□□□□□ -0.82
LINC02560-201ENST00000596379 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
LINC02560-201ENST00000596379 GATCO43716 136 aaKnown RBP9.91□□□□□ -0.82
LINC02560-201ENST00000596379 GAS8-AS1O95177 125 aa9.91□□□□□ -0.82
LINC02560-201ENST00000596379 ESDP10768 282 aa9.91□□□□□ -0.82
LINC02560-201ENST00000596379 SPINK6Q6UWN8 80 aa9.91□□□□□ -0.82
LINC02560-201ENST00000596379 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
LINC02560-201ENST00000596379 TRBV6-5A0A0K0K1A5 114 aa9.9□□□□□ -0.82
LINC02560-201ENST00000596379 KRTAP10-8P60410 259 aa9.9□□□□□ -0.82
LINC02560-201ENST00000596379 PKIGQ9Y2B9 76 aa9.9□□□□□ -0.82
LINC02560-201ENST00000596379 A8MWL6 223 aa9.89□□□□□ -0.83
LINC02560-201ENST00000596379 TSHBP01222 138 aa9.89□□□□□ -0.83
LINC02560-201ENST00000596379 SRSF9Q13242 221 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC02560-201ENST00000596379 SS18Q15532 418 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms