RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 FAM229AH3BQW9 127 aa10.59□□□□□ -0.71
USHBP1-205ENST00000595993 RPS10P46783 165 aaKnown RBP10.59□□□□□ -0.71
USHBP1-205ENST00000595993 CAMPP49913 170 aa10.59□□□□□ -0.71
USHBP1-205ENST00000595993 LAGE3Q14657 143 aa10.59□□□□□ -0.71
USHBP1-205ENST00000595993 IQCJQ1A5X6 159 aa10.59□□□□□ -0.71
USHBP1-205ENST00000595993 MPV17L2Q567V2 206 aa10.59□□□□□ -0.71
USHBP1-205ENST00000595993 TMEM97Q5BJF2 176 aa10.59□□□□□ -0.71
USHBP1-205ENST00000595993 MRPL54Q6P161 138 aaKnown RBP10.59□□□□□ -0.71
USHBP1-205ENST00000595993 NTN5Q8WTR8 489 aaPredicted RBP10.59□□□□□ -0.71
USHBP1-205ENST00000595993 CHCHD5Q9BSY4 110 aa10.59□□□□□ -0.71
USHBP1-205ENST00000595993 URGCP-MRPS24S4R325 110 aa10.59□□□□□ -0.71
USHBP1-205ENST00000595993 TRBV25-1A0A075B6N4 114 aa10.58□□□□□ -0.72
USHBP1-205ENST00000595993 IGHV1-24A0A0C4DH33 117 aa10.58□□□□□ -0.72
USHBP1-205ENST00000595993 SMKR1H3BMG3 65 aa10.58□□□□□ -0.72
USHBP1-205ENST00000595993 NCR2O95944 276 aa10.58□□□□□ -0.72
USHBP1-205ENST00000595993 MT-ND4LP03901 98 aa10.58□□□□□ -0.72
USHBP1-205ENST00000595993 CHCHD7Q9BUK0 85 aa10.58□□□□□ -0.72
USHBP1-205ENST00000595993 A0A087WX48 190 aa10.57□□□□□ -0.72
USHBP1-205ENST00000595993 TRBV6-5A0A0K0K1A5 114 aa10.57□□□□□ -0.72
USHBP1-205ENST00000595993 TMEM262E9PQX1 116 aa10.57□□□□□ -0.72
USHBP1-205ENST00000595993 GAGE6Q13070 117 aa10.57□□□□□ -0.72
USHBP1-205ENST00000595993 ANAPC16Q96DE5 110 aa10.57□□□□□ -0.72
USHBP1-205ENST00000595993 MRAP2Q96G30 205 aa10.57□□□□□ -0.72
USHBP1-205ENST00000595993 KLK12Q9UKR0 248 aa10.57□□□□□ -0.72
USHBP1-205ENST00000595993 A0A1B0GW15 77 aa10.56□□□□□ -0.72
USHBP1-205ENST00000595993 SDHAF1A6NFY7 115 aa10.56□□□□□ -0.72
USHBP1-205ENST00000595993 HBBP68871 147 aa10.56□□□□□ -0.72
USHBP1-205ENST00000595993 HAMPP81172 84 aa10.56□□□□□ -0.72
USHBP1-205ENST00000595993 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
USHBP1-205ENST00000595993 KCNIP4Q6PIL6 250 aa10.56□□□□□ -0.72
USHBP1-205ENST00000595993 ATRAIDQ6UW56 229 aa10.56□□□□□ -0.72
USHBP1-205ENST00000595993 Q8N976 141 aa10.56□□□□□ -0.72
USHBP1-205ENST00000595993 SEC11CQ9BY50 192 aa10.56□□□□□ -0.72
USHBP1-205ENST00000595993 IGLV5-52A0A0A0MRZ9 124 aa10.55□□□□□ -0.72
USHBP1-205ENST00000595993 COTL1Q14019 142 aa10.55□□□□□ -0.72
USHBP1-205ENST00000595993 MRPL51Q4U2R6 128 aaKnown RBP10.55□□□□□ -0.72
USHBP1-205ENST00000595993 NRACQ8N912 160 aa10.55□□□□□ -0.72
USHBP1-205ENST00000595993 TMEM243Q9BU79 118 aa10.55□□□□□ -0.72
USHBP1-205ENST00000595993 AMTP48728 403 aa10.54□□□□□ -0.72
USHBP1-205ENST00000595993 RBX1P62877 108 aa10.54□□□□□ -0.72
USHBP1-205ENST00000595993 C10orf91Q5T1B1 145 aa10.54□□□□□ -0.72
USHBP1-205ENST00000595993 Q8N814 137 aa10.54□□□□□ -0.72
USHBP1-205ENST00000595993 ST20Q9HBF5 79 aa10.54□□□□□ -0.72
USHBP1-205ENST00000595993 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
USHBP1-205ENST00000595993 ENHOQ6UWT2 76 aa10.53□□□□□ -0.72
USHBP1-205ENST00000595993 ATP5L2Q7Z4Y8 100 aa10.53□□□□□ -0.72
USHBP1-205ENST00000595993 UBE2WQ96B02 151 aa10.53□□□□□ -0.72
USHBP1-205ENST00000595993 FAM30AQ9NZY2 134 aa10.53□□□□□ -0.72
USHBP1-205ENST00000595993 HMCN2Q8NDA2 5059 aa10.53□□□□□ -0.72
USHBP1-205ENST00000595993 PSCAO43653 123 aa10.52□□□□□ -0.73
USHBP1-205ENST00000595993 TSHBP01222 138 aa10.52□□□□□ -0.73
USHBP1-205ENST00000595993 ANGP03950 147 aaKnown RBP10.52□□□□□ -0.73
USHBP1-205ENST00000595993 S100A8P05109 93 aa10.52□□□□□ -0.73
USHBP1-205ENST00000595993 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.73
USHBP1-205ENST00000595993 PKIAP61925 76 aa10.52□□□□□ -0.73
USHBP1-205ENST00000595993 ELOBQ15370 118 aa10.52□□□□□ -0.73
USHBP1-205ENST00000595993 Q6ZSA8 131 aa10.52□□□□□ -0.73
USHBP1-205ENST00000595993 CARHSP1Q9Y2V2 147 aaKnown RBP10.52□□□□□ -0.73
USHBP1-205ENST00000595993 I3L3M4 83 aa10.51□□□□□ -0.73
USHBP1-205ENST00000595993 PMCHP20382 165 aa10.51□□□□□ -0.73
USHBP1-205ENST00000595993 WFDC2Q14508 124 aa10.51□□□□□ -0.73
USHBP1-205ENST00000595993 C20orf203Q8NBC4 194 aa10.51□□□□□ -0.73
USHBP1-205ENST00000595993 TMEM242Q9NWH2 141 aa10.51□□□□□ -0.73
USHBP1-205ENST00000595993 LRP1Q07954 4544 aaKnown RBP10.5□□□□□ -0.73
USHBP1-205ENST00000595993 IGLV4-60A0A075B6I1 120 aa10.5□□□□□ -0.73
USHBP1-205ENST00000595993 TRBV27A0A0K0K1C4 114 aa10.5□□□□□ -0.73
USHBP1-205ENST00000595993 APCSP02743 223 aa10.5□□□□□ -0.73
USHBP1-205ENST00000595993 CLPSL2Q6UWE3 100 aa10.5□□□□□ -0.73
USHBP1-205ENST00000595993 IGKV2D-24A0A075B6R9 120 aa10.49□□□□□ -0.73
USHBP1-205ENST00000595993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.49□□□□□ -0.73
USHBP1-205ENST00000595993 IGKV2-29A2NJV5 120 aaPredicted RBP10.49□□□□□ -0.73
USHBP1-205ENST00000595993 KRTAP29-1A8MX34 341 aaPredicted RBP10.49□□□□□ -0.73
USHBP1-205ENST00000595993 D6R8Y8 96 aa10.49□□□□□ -0.73
USHBP1-205ENST00000595993 CKS2P33552 79 aa10.49□□□□□ -0.73
USHBP1-205ENST00000595993 SUMO2P61956 95 aaKnown RBP10.49□□□□□ -0.73
USHBP1-205ENST00000595993 LINC00269Q8N2A0 174 aa10.49□□□□□ -0.73
USHBP1-205ENST00000595993 BTF3L4Q96K17 158 aa10.49□□□□□ -0.73
USHBP1-205ENST00000595993 TM2D2Q9BX73 214 aa10.49□□□□□ -0.73
USHBP1-205ENST00000595993 CTDSP1Q9GZU7 261 aa10.49□□□□□ -0.73
USHBP1-205ENST00000595993 PRR34Q9NV39 138 aa10.49□□□□□ -0.73
USHBP1-205ENST00000595993 A0A1B0GUV1 79 aa10.48□□□□□ -0.73
USHBP1-205ENST00000595993 UBE2L6O14933 153 aa10.48□□□□□ -0.73
USHBP1-205ENST00000595993 NPYP01303 97 aa10.48□□□□□ -0.73
USHBP1-205ENST00000595993 CRPP02741 224 aa10.48□□□□□ -0.73
USHBP1-205ENST00000595993 IMMP2LQ96T52 175 aa10.48□□□□□ -0.73
USHBP1-205ENST00000595993 FAT3Q8TDW7 4589 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 TRBV24-1A0A075B6N3 115 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 C7orf77A4D0Y5 90 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 J3QL48 77 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 TNFRSF6BO95407 300 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 PPP1R17O96001 155 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 ESDP10768 282 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 Q0VG73 95 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 CLRN3Q8NCR9 226 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 RMI2Q96E14 147 aa10.47□□□□□ -0.73
USHBP1-205ENST00000595993 VCYO14598 125 aa10.46□□□□□ -0.73
USHBP1-205ENST00000595993 LECT2O14960 151 aa10.46□□□□□ -0.73
USHBP1-205ENST00000595993 PLA2G1BP04054 148 aaKnown RBP10.45□□□□□ -0.74
USHBP1-205ENST00000595993 REG3AQ06141 175 aa10.45□□□□□ -0.74
USHBP1-205ENST00000595993 MIAQ16674 131 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms