RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 SRP19P09132 144 aaKnown RBP11.6□□□□□ -0.55
PNKP-206ENST00000595792 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
PNKP-206ENST00000595792 GFRA4Q9GZZ7 299 aa11.6□□□□□ -0.55
PNKP-206ENST00000595792 IGLV4-60A0A075B6I1 120 aa11.59□□□□□ -0.55
PNKP-206ENST00000595792 RPL39LQ96EH5 51 aaKnown RBP11.59□□□□□ -0.55
PNKP-206ENST00000595792 PGLYRP4Q96LB8 373 aa11.59□□□□□ -0.55
PNKP-206ENST00000595792 HLA-DQA1P01909 254 aa11.58□□□□□ -0.56
PNKP-206ENST00000595792 PKIAP61925 76 aa11.58□□□□□ -0.56
PNKP-206ENST00000595792 MIAQ16674 131 aa11.58□□□□□ -0.56
PNKP-206ENST00000595792 LINC01551Q86U37 167 aa11.58□□□□□ -0.56
PNKP-206ENST00000595792 SMIM7Q9BQ49 75 aa11.58□□□□□ -0.56
PNKP-206ENST00000595792 SMDT1Q9H4I9 107 aa11.58□□□□□ -0.56
PNKP-206ENST00000595792 J3QL48 77 aa11.57□□□□□ -0.56
PNKP-206ENST00000595792 GAS8-AS1O95177 125 aa11.57□□□□□ -0.56
PNKP-206ENST00000595792 TEX261Q6UWH6 196 aa11.57□□□□□ -0.56
PNKP-206ENST00000595792 CIRBP-AS1Q8TBR5 109 aa11.57□□□□□ -0.56
PNKP-206ENST00000595792 TMEM243Q9BU79 118 aa11.57□□□□□ -0.56
PNKP-206ENST00000595792 CHAC1Q9BUX1 264 aa11.57□□□□□ -0.56
PNKP-206ENST00000595792 A8MWL6 223 aa11.56□□□□□ -0.56
PNKP-206ENST00000595792 C9JQL5 133 aa11.56□□□□□ -0.56
PNKP-206ENST00000595792 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
PNKP-206ENST00000595792 FAM74A3Q4VXF1 159 aa11.56□□□□□ -0.56
PNKP-206ENST00000595792 A0A1B0GUV1 79 aa11.55□□□□□ -0.56
PNKP-206ENST00000595792 ZNF727A8MUV8 499 aa11.55□□□□□ -0.56
PNKP-206ENST00000595792 PRSS1P07477 247 aa11.55□□□□□ -0.56
PNKP-206ENST00000595792 KRTAP10-4P60372 401 aaPredicted RBP11.55□□□□□ -0.56
PNKP-206ENST00000595792 REG3AQ06141 175 aa11.55□□□□□ -0.56
PNKP-206ENST00000595792 CT83Q5H943 113 aa11.55□□□□□ -0.56
PNKP-206ENST00000595792 SMIM15Q7Z3B0 74 aa11.55□□□□□ -0.56
PNKP-206ENST00000595792 LRP1Q07954 4544 aaKnown RBP11.54□□□□□ -0.56
PNKP-206ENST00000595792 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
PNKP-206ENST00000595792 PEA15Q15121 130 aa11.54□□□□□ -0.56
PNKP-206ENST00000595792 AMTP48728 403 aa11.53□□□□□ -0.56
PNKP-206ENST00000595792 SRSF3P84103 164 aaKnown RBP11.53□□□□□ -0.56
PNKP-206ENST00000595792 COTL1Q14019 142 aa11.53□□□□□ -0.56
PNKP-206ENST00000595792 OSTCQ9NRP0 149 aa11.53□□□□□ -0.56
PNKP-206ENST00000595792 HIGD1CA8MV81 97 aa11.52□□□□□ -0.57
PNKP-206ENST00000595792 C14orf177Q52M58 125 aa11.52□□□□□ -0.57
PNKP-206ENST00000595792 TSKUQ8WUA8 353 aa11.52□□□□□ -0.57
PNKP-206ENST00000595792 BORCS7Q96B45 105 aa11.52□□□□□ -0.57
PNKP-206ENST00000595792 V9GYV3 84 aa11.52□□□□□ -0.57
PNKP-206ENST00000595792 FAM231BA6NCW3 169 aa11.51□□□□□ -0.57
PNKP-206ENST00000595792 RNF185Q96GF1 192 aa11.51□□□□□ -0.57
PNKP-206ENST00000595792 FAT3Q8TDW7 4589 aa11.51□□□□□ -0.57
PNKP-206ENST00000595792 PKHD1L1Q86WI1 4243 aa11.5□□□□□ -0.57
PNKP-206ENST00000595792 KRTAP29-1A8MX34 341 aaPredicted RBP11.5□□□□□ -0.57
PNKP-206ENST00000595792 RPL23P62829 140 aaKnown RBP11.5□□□□□ -0.57
PNKP-206ENST00000595792 ISOC2Q96AB3 205 aa11.5□□□□□ -0.57
PNKP-206ENST00000595792 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
PNKP-206ENST00000595792 SDHAF1A6NFY7 115 aa11.49□□□□□ -0.57
PNKP-206ENST00000595792 RPS10P46783 165 aaKnown RBP11.49□□□□□ -0.57
PNKP-206ENST00000595792 TMEM241Q24JQ0 296 aa11.49□□□□□ -0.57
PNKP-206ENST00000595792 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.48□□□□□ -0.57
PNKP-206ENST00000595792 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
PNKP-206ENST00000595792 IGKV2-29A2NJV5 120 aaPredicted RBP11.48□□□□□ -0.57
PNKP-206ENST00000595792 PANO1I0J062 215 aa11.48□□□□□ -0.57
PNKP-206ENST00000595792 RAB14P61106 215 aa11.48□□□□□ -0.57
PNKP-206ENST00000595792 TMEM191AQ9H0A3 160 aa11.48□□□□□ -0.57
PNKP-206ENST00000595792 TRAV8-4A0A0B4J246 113 aa11.47□□□□□ -0.57
PNKP-206ENST00000595792 UBE2L6O14933 153 aa11.47□□□□□ -0.57
PNKP-206ENST00000595792 RAB4AP20338 218 aa11.47□□□□□ -0.57
PNKP-206ENST00000595792 AMN1Q8IY45 258 aa11.47□□□□□ -0.57
PNKP-206ENST00000595792 NUP35Q8NFH5 326 aa11.47□□□□□ -0.57
PNKP-206ENST00000595792 NAT8Q9UHE5 227 aa11.47□□□□□ -0.57
PNKP-206ENST00000595792 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
PNKP-206ENST00000595792 NCR2O95944 276 aa11.46□□□□□ -0.57
PNKP-206ENST00000595792 SLPIP03973 132 aa11.46□□□□□ -0.57
PNKP-206ENST00000595792 C9orf163Q8N9P6 203 aa11.46□□□□□ -0.57
PNKP-206ENST00000595792 TSHBP01222 138 aa11.45□□□□□ -0.58
PNKP-206ENST00000595792 POLR2KP53803 58 aaKnown RBP11.45□□□□□ -0.58
PNKP-206ENST00000595792 DGAT2L7PQ6IED9 249 aa11.45□□□□□ -0.58
PNKP-206ENST00000595792 IGKV3OR2-268A0A0C4DH90 116 aa11.44□□□□□ -0.58
PNKP-206ENST00000595792 SMKR1H3BMG3 65 aa11.44□□□□□ -0.58
PNKP-206ENST00000595792 APCSP02743 223 aa11.44□□□□□ -0.58
PNKP-206ENST00000595792 ESDP10768 282 aa11.44□□□□□ -0.58
PNKP-206ENST00000595792 ADIRFQ15847 76 aa11.44□□□□□ -0.58
PNKP-206ENST00000595792 TMEM242Q9NWH2 141 aa11.44□□□□□ -0.58
PNKP-206ENST00000595792 I3L3M4 83 aa11.43□□□□□ -0.58
PNKP-206ENST00000595792 FGF6P10767 208 aa11.43□□□□□ -0.58
PNKP-206ENST00000595792 PMCHP20382 165 aa11.43□□□□□ -0.58
PNKP-206ENST00000595792 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
PNKP-206ENST00000595792 RPL37AP61513 92 aaKnown RBP11.43□□□□□ -0.58
PNKP-206ENST00000595792 C15orf56Q8N910 161 aa11.43□□□□□ -0.58
PNKP-206ENST00000595792 GAGE12HA6NDE8 117 aa11.42□□□□□ -0.58
PNKP-206ENST00000595792 RNASEKQ6P5S7 137 aaKnown RBP11.42□□□□□ -0.58
PNKP-206ENST00000595792 SDIM1Q6ZPB5 146 aa11.42□□□□□ -0.58
PNKP-206ENST00000595792 ST20Q9HBF5 79 aa11.42□□□□□ -0.58
PNKP-206ENST00000595792 hDV102S1A0JD36 115 aa11.41□□□□□ -0.58
PNKP-206ENST00000595792 H7C423 109 aa11.41□□□□□ -0.58
PNKP-206ENST00000595792 RIGQ13278 110 aa11.41□□□□□ -0.58
PNKP-206ENST00000595792 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
PNKP-206ENST00000595792 NRACQ8N912 160 aa11.41□□□□□ -0.58
PNKP-206ENST00000595792 CLRN3Q8NCR9 226 aa11.41□□□□□ -0.58
PNKP-206ENST00000595792 MRAP2Q96G30 205 aa11.41□□□□□ -0.58
PNKP-206ENST00000595792 NAT8BQ9UHF3 227 aa11.41□□□□□ -0.58
PNKP-206ENST00000595792 HMCN2Q8NDA2 5059 aa11.41□□□□□ -0.58
PNKP-206ENST00000595792 SMIM27A0A1W2PRY6 76 aa11.4□□□□□ -0.58
PNKP-206ENST00000595792 CNBPP62633 177 aaKnown RBP11.4□□□□□ -0.58
PNKP-206ENST00000595792 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
PNKP-206ENST00000595792 TRBV27A0A0K0K1C4 114 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 1257.5 ms