RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 COLCA2A8K830 154 aa15.34■□□□□ 0.05
SNRNP70-204ENST00000595231 PRSS47A8MTI9 375 aa15.34■□□□□ 0.05
SNRNP70-204ENST00000595231 TSHBP01222 138 aa15.34■□□□□ 0.05
SNRNP70-204ENST00000595231 FABP9Q0Z7S8 132 aa15.34■□□□□ 0.05
SNRNP70-204ENST00000595231 TRBV25-1A0A075B6N4 114 aa15.33■□□□□ 0.04
SNRNP70-204ENST00000595231 IGHV1-24A0A0C4DH33 117 aa15.33■□□□□ 0.04
SNRNP70-204ENST00000595231 NIT1Q86X76 327 aa15.32■□□□□ 0.04
SNRNP70-204ENST00000595231 ALKBH7Q9BT30 221 aaPredicted RBP15.32■□□□□ 0.04
SNRNP70-204ENST00000595231 SMIM2Q9BVW6 85 aa15.32■□□□□ 0.04
SNRNP70-204ENST00000595231 Q8N3U1 123 aa15.32■□□□□ 0.04
SNRNP70-204ENST00000595231 NBDYA0A0U1RRE5 68 aa15.31■□□□□ 0.04
SNRNP70-204ENST00000595231 LINC01556Q5JQF7 62 aa15.31■□□□□ 0.04
SNRNP70-204ENST00000595231 Q6ZR54 194 aa15.31■□□□□ 0.04
SNRNP70-204ENST00000595231 KRTAP1-5Q9BYS1 174 aa15.31■□□□□ 0.04
SNRNP70-204ENST00000595231 RYR3Q15413 4870 aa15.31■□□□□ 0.04
SNRNP70-204ENST00000595231 AMTP48728 403 aa15.3■□□□□ 0.04
SNRNP70-204ENST00000595231 CHCHD5Q9BSY4 110 aa15.3■□□□□ 0.04
SNRNP70-204ENST00000595231 M0R2N4 97 aa15.29■□□□□ 0.04
SNRNP70-204ENST00000595231 KIR2DL4Q99706 377 aa15.29■□□□□ 0.04
SNRNP70-204ENST00000595231 TMEM243Q9BU79 118 aa15.29■□□□□ 0.04
SNRNP70-204ENST00000595231 CHCHD7Q9BUK0 85 aa15.29■□□□□ 0.04
SNRNP70-204ENST00000595231 MAP1LC3AQ9H492 121 aa15.29■□□□□ 0.04
SNRNP70-204ENST00000595231 LOC389332A0A1B0GUA5 103 aa15.28■□□□□ 0.04
SNRNP70-204ENST00000595231 ESDP10768 282 aa15.28■□□□□ 0.04
SNRNP70-204ENST00000595231 IGHV3-30P01768 117 aa15.27■□□□□ 0.03
SNRNP70-204ENST00000595231 IGHV3-33P01772 117 aa15.27■□□□□ 0.03
SNRNP70-204ENST00000595231 IGHV3-30-3P0DP02 117 aa15.27■□□□□ 0.03
SNRNP70-204ENST00000595231 IGHV3-30-5P0DP03 117 aa15.27■□□□□ 0.03
SNRNP70-204ENST00000595231 TMEM262E9PQX1 116 aa15.26■□□□□ 0.03
SNRNP70-204ENST00000595231 GAGE6Q13070 117 aa15.26■□□□□ 0.03
SNRNP70-204ENST00000595231 RAB5AP20339 215 aa15.25■□□□□ 0.03
SNRNP70-204ENST00000595231 FCER1GP30273 86 aa15.25■□□□□ 0.03
SNRNP70-204ENST00000595231 MPV17L2Q567V2 206 aa15.25■□□□□ 0.03
SNRNP70-204ENST00000595231 K7EP13 123 aa15.25■□□□□ 0.03
SNRNP70-204ENST00000595231 TCAPO15273 167 aa15.25■□□□□ 0.03
SNRNP70-204ENST00000595231 TTC32Q5I0X7 151 aa15.25■□□□□ 0.03
SNRNP70-204ENST00000595231 Q8N8P6 123 aa15.25■□□□□ 0.03
SNRNP70-204ENST00000595231 A0A087WX48 190 aa15.24■□□□□ 0.03
SNRNP70-204ENST00000595231 IFI27P40305 119 aaPredicted RBP15.24■□□□□ 0.03
SNRNP70-204ENST00000595231 DNAH2Q9P225 4427 aa15.23■□□□□ 0.03
SNRNP70-204ENST00000595231 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.23■□□□□ 0.03
SNRNP70-204ENST00000595231 TRAV9-2A0A087WT02 112 aa15.23■□□□□ 0.03
SNRNP70-204ENST00000595231 IGKV2-29A2NJV5 120 aaPredicted RBP15.23■□□□□ 0.03
SNRNP70-204ENST00000595231 TRGC2P03986 189 aa15.22■□□□□ 0.03
SNRNP70-204ENST00000595231 Q8N976 141 aa15.22■□□□□ 0.03
SNRNP70-204ENST00000595231 NXT2Q9NPJ8 142 aaKnown RBP15.22■□□□□ 0.03
SNRNP70-204ENST00000595231 H7C423 109 aa15.22■□□□□ 0.03
SNRNP70-204ENST00000595231 PKIAP61925 76 aa15.22■□□□□ 0.03
SNRNP70-204ENST00000595231 RBX1P62877 108 aa15.22■□□□□ 0.03
SNRNP70-204ENST00000595231 A0A1B0GUV1 79 aa15.21■□□□□ 0.03
SNRNP70-204ENST00000595231 UBE2L6O14933 153 aa15.21■□□□□ 0.03
SNRNP70-204ENST00000595231 C10orf126Q8N4M7 172 aa15.21■□□□□ 0.03
SNRNP70-204ENST00000595231 IBA57-AS1B1ANH7 110 aa15.2■□□□□ 0.02
SNRNP70-204ENST00000595231 C18orf32Q8TCD1 76 aa15.2■□□□□ 0.02
SNRNP70-204ENST00000595231 C20orf203Q8NBC4 194 aa15.19■□□□□ 0.02
SNRNP70-204ENST00000595231 IGLV4-60A0A075B6I1 120 aa15.19■□□□□ 0.02
SNRNP70-204ENST00000595231 PRSS3P2Q8NHM4 247 aa15.19■□□□□ 0.02
SNRNP70-204ENST00000595231 KLK12Q9UKR0 248 aa15.19■□□□□ 0.02
SNRNP70-204ENST00000595231 FRAS1Q86XX4 4008 aa15.18■□□□□ 0.02
SNRNP70-204ENST00000595231 K7EMI3 77 aa15.18■□□□□ 0.02
SNRNP70-204ENST00000595231 FGF6P10767 208 aa15.18■□□□□ 0.02
SNRNP70-204ENST00000595231 LINC01546A6NGU7 62 aa15.16■□□□□ 0.02
SNRNP70-204ENST00000595231 MRPL52Q86TS9 123 aaKnown RBP15.16■□□□□ 0.02
SNRNP70-204ENST00000595231 ANGP03950 147 aaKnown RBP15.16■□□□□ 0.02
SNRNP70-204ENST00000595231 RPL39P62891 51 aaKnown RBP15.16■□□□□ 0.02
SNRNP70-204ENST00000595231 LAGE3Q14657 143 aa15.16■□□□□ 0.02
SNRNP70-204ENST00000595231 URB1-AS1Q96HZ7 61 aa15.16■□□□□ 0.02
SNRNP70-204ENST00000595231 DNAH10Q8IVF4 4471 aa15.15■□□□□ 0.02
SNRNP70-204ENST00000595231 AMMECR1LQ6DCA0 310 aa15.15■□□□□ 0.02
SNRNP70-204ENST00000595231 C6orf223Q8N319 242 aa15.15■□□□□ 0.02
SNRNP70-204ENST00000595231 UBE2D4Q9Y2X8 147 aa15.15■□□□□ 0.02
SNRNP70-204ENST00000595231 ZNF25P17030 456 aaPredicted RBP15.14■□□□□ 0.01
SNRNP70-204ENST00000595231 BTF3P20290 206 aaKnown RBP15.14■□□□□ 0.01
SNRNP70-204ENST00000595231 ORMDL2Q53FV1 153 aa15.14■□□□□ 0.01
SNRNP70-204ENST00000595231 C1orf134Q5TEV5 83 aa15.14■□□□□ 0.01
SNRNP70-204ENST00000595231 RNASEKQ6P5S7 137 aaKnown RBP15.14■□□□□ 0.01
SNRNP70-204ENST00000595231 ENHOQ6UWT2 76 aa15.13■□□□□ 0.01
SNRNP70-204ENST00000595231 LINC00269Q8N2A0 174 aa15.13■□□□□ 0.01
SNRNP70-204ENST00000595231 PRR34Q9NV39 138 aa15.13■□□□□ 0.01
SNRNP70-204ENST00000595231 TMEM18Q96B42 140 aa15.12■□□□□ 0.01
SNRNP70-204ENST00000595231 CSDC2Q9Y534 153 aaKnown RBP15.12■□□□□ 0.01
SNRNP70-204ENST00000595231 RTL8CO15255 209 aa15.11■□□□□ 0.01
SNRNP70-204ENST00000595231 LINC00614P0C842 121 aa15.11■□□□□ 0.01
SNRNP70-204ENST00000595231 Q6ZRN7 208 aaPredicted RBP15.11■□□□□ 0.01
SNRNP70-204ENST00000595231 FA2HQ7L5A8 372 aa15.11■□□□□ 0.01
SNRNP70-204ENST00000595231 UBE2WQ96B02 151 aa15.11■□□□□ 0.01
SNRNP70-204ENST00000595231 TIMM21Q9BVV7 248 aa15.11■□□□□ 0.01
SNRNP70-204ENST00000595231 Q9HAA7 133 aa15.11■□□□□ 0.01
SNRNP70-204ENST00000595231 CDC42SE2Q9NRR3 84 aa15.1■□□□□ 0.01
SNRNP70-204ENST00000595231 TRAV8-3A0A0A6YYJ7 113 aa15.09■□□□□ 0.01
SNRNP70-204ENST00000595231 C2orf66Q6UXQ4 117 aa15.09■□□□□ 0.01
SNRNP70-204ENST00000595231 OR5A1Q8NGJ0 315 aa15.09■□□□□ 0.01
SNRNP70-204ENST00000595231 FAM104AQ969W3 186 aa15.09■□□□□ 0.01
SNRNP70-204ENST00000595231 TMEM101Q96IK0 257 aa15.09■□□□□ 0.01
SNRNP70-204ENST00000595231 REG3AQ06141 175 aa15.09■□□□□ 0.01
SNRNP70-204ENST00000595231 CLPSL2Q6UWE3 100 aa15.09■□□□□ 0.01
SNRNP70-204ENST00000595231 AP5S1Q9NUS5 200 aa15.09■□□□□ 0.01
SNRNP70-204ENST00000595231 Q0VG73 95 aa15.08■□□□□ 0
SNRNP70-204ENST00000595231 CYSLTR1Q9Y271 337 aa15.08■□□□□ 0
SNRNP70-204ENST00000595231 DNAH17Q9UFH2 4485 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 264 ms