RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 COTL1Q14019 142 aa15.25■□□□□ 0.03
LSM4-204ENST00000594828 SMIM15Q7Z3B0 74 aa15.25■□□□□ 0.03
LSM4-204ENST00000594828 GATD1Q8NB37 220 aa15.25■□□□□ 0.03
LSM4-204ENST00000594828 IGLV4-60A0A075B6I1 120 aa15.24■□□□□ 0.03
LSM4-204ENST00000594828 IGLV10-54A0A075B6I4 117 aa15.24■□□□□ 0.03
LSM4-204ENST00000594828 UBE2L6O14933 153 aa15.24■□□□□ 0.03
LSM4-204ENST00000594828 DGAT2L7PQ6IED9 249 aa15.24■□□□□ 0.03
LSM4-204ENST00000594828 FAM231DQ6ZW35 169 aa15.24■□□□□ 0.03
LSM4-204ENST00000594828 TRAV8-4A0A0B4J246 113 aa15.23■□□□□ 0.03
LSM4-204ENST00000594828 TRAV26-2A0A0B4J265 109 aa15.23■□□□□ 0.03
LSM4-204ENST00000594828 A8MWL6 223 aa15.23■□□□□ 0.03
LSM4-204ENST00000594828 AMTP48728 403 aa15.23■□□□□ 0.03
LSM4-204ENST00000594828 CIRBP-AS1Q8TBR5 109 aa15.22■□□□□ 0.03
LSM4-204ENST00000594828 EIF5A2Q9GZV4 153 aaKnown RBP15.22■□□□□ 0.03
LSM4-204ENST00000594828 FOXA3P55318 350 aaPredicted RBP15.21■□□□□ 0.03
LSM4-204ENST00000594828 GFRA4Q9GZZ7 299 aa15.21■□□□□ 0.03
LSM4-204ENST00000594828 TEX261Q6UWH6 196 aa15.2■□□□□ 0.02
LSM4-204ENST00000594828 CLRN3Q8NCR9 226 aa15.2■□□□□ 0.02
LSM4-204ENST00000594828 C9orf163Q8N9P6 203 aa15.19■□□□□ 0.02
LSM4-204ENST00000594828 RPL39LQ96EH5 51 aaKnown RBP15.19■□□□□ 0.02
LSM4-204ENST00000594828 FLG2Q5D862 2391 aaPredicted RBP15.18■□□□□ 0.02
LSM4-204ENST00000594828 CT83Q5H943 113 aa15.18■□□□□ 0.02
LSM4-204ENST00000594828 SMIM7Q9BQ49 75 aa15.18■□□□□ 0.02
LSM4-204ENST00000594828 NDUFS6O75380 124 aaKnown RBP15.17■□□□□ 0.02
LSM4-204ENST00000594828 BORCS7Q96B45 105 aa15.16■□□□□ 0.02
LSM4-204ENST00000594828 FAM210AQ96ND0 272 aa15.16■□□□□ 0.02
LSM4-204ENST00000594828 HERC1Q15751 4861 aa15.16■□□□□ 0.02
LSM4-204ENST00000594828 MYCBP2O75592 4640 aa15.15■□□□□ 0.02
LSM4-204ENST00000594828 ZNF727A8MUV8 499 aa15.15■□□□□ 0.02
LSM4-204ENST00000594828 NCR2O95944 276 aa15.15■□□□□ 0.02
LSM4-204ENST00000594828 LINC01551Q86U37 167 aa15.15■□□□□ 0.02
LSM4-204ENST00000594828 hDV102S1A0JD36 115 aa15.14■□□□□ 0.01
LSM4-204ENST00000594828 SDHAF1A6NFY7 115 aa15.14■□□□□ 0.01
LSM4-204ENST00000594828 SRP19P09132 144 aaKnown RBP15.13■□□□□ 0.01
LSM4-204ENST00000594828 AMMECR1LQ6DCA0 310 aa15.13■□□□□ 0.01
LSM4-204ENST00000594828 TSKUQ8WUA8 353 aa15.13■□□□□ 0.01
LSM4-204ENST00000594828 DMBT1Q9UGM3 2413 aaPredicted RBP15.13■□□□□ 0.01
LSM4-204ENST00000594828 HIGD1CA8MV81 97 aa15.12■□□□□ 0.01
LSM4-204ENST00000594828 H7C423 109 aa15.12■□□□□ 0.01
LSM4-204ENST00000594828 J3QL48 77 aa15.12■□□□□ 0.01
LSM4-204ENST00000594828 APCSP02743 223 aa15.12■□□□□ 0.01
LSM4-204ENST00000594828 OSTCQ9NRP0 149 aa15.12■□□□□ 0.01
LSM4-204ENST00000594828 IGKV3OR2-268A0A0C4DH90 116 aa15.11■□□□□ 0.01
LSM4-204ENST00000594828 A0A1B0GUT8 65 aa15.11■□□□□ 0.01
LSM4-204ENST00000594828 PMCHP20382 165 aa15.11■□□□□ 0.01
LSM4-204ENST00000594828 CNBPP62633 177 aaKnown RBP15.11■□□□□ 0.01
LSM4-204ENST00000594828 RNASEKQ6P5S7 137 aaKnown RBP15.11■□□□□ 0.01
LSM4-204ENST00000594828 SDIM1Q6ZPB5 146 aa15.11■□□□□ 0.01
LSM4-204ENST00000594828 AP5S1Q9NUS5 200 aa15.11■□□□□ 0.01
LSM4-204ENST00000594828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.1■□□□□ 0.01
LSM4-204ENST00000594828 TRBV6-5A0A0K0K1A5 114 aa15.1■□□□□ 0.01
LSM4-204ENST00000594828 A0A1B0GVG6 124 aa15.1■□□□□ 0.01
LSM4-204ENST00000594828 IGKV2-29A2NJV5 120 aaPredicted RBP15.1■□□□□ 0.01
LSM4-204ENST00000594828 FAM231BA6NCW3 169 aa15.1■□□□□ 0.01
LSM4-204ENST00000594828 I3L3M4 83 aa15.1■□□□□ 0.01
LSM4-204ENST00000594828 GAGE12HA6NDE8 117 aa15.09■□□□□ 0.01
LSM4-204ENST00000594828 KRTAP10-4P60372 401 aaPredicted RBP15.09■□□□□ 0.01
LSM4-204ENST00000594828 TMEM191AQ9H0A3 160 aa15.09■□□□□ 0.01
LSM4-204ENST00000594828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.09■□□□□ 0.01
LSM4-204ENST00000594828 GAS8-AS1O95177 125 aa15.08■□□□□ 0
LSM4-204ENST00000594828 FGF6P10767 208 aa15.08■□□□□ 0
LSM4-204ENST00000594828 ST20Q9HBF5 79 aa15.08■□□□□ 0
LSM4-204ENST00000594828 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.07■□□□□ 0
LSM4-204ENST00000594828 KRTAP29-1A8MX34 341 aaPredicted RBP15.06■□□□□ 0
LSM4-204ENST00000594828 SLPIP03973 132 aa15.06■□□□□ 0
LSM4-204ENST00000594828 RAB4AP20338 218 aa15.06■□□□□ 0
LSM4-204ENST00000594828 CFAP161Q6P656 301 aa15.06■□□□□ 0
LSM4-204ENST00000594828 RNF185Q96GF1 192 aa15.06■□□□□ 0
LSM4-204ENST00000594828 PANO1I0J062 215 aa15.05■□□□□ -0
LSM4-204ENST00000594828 TMEM241Q24JQ0 296 aa15.05■□□□□ -0
LSM4-204ENST00000594828 CHCHD10Q8WYQ3 142 aaPredicted RBP15.05■□□□□ -0
LSM4-204ENST00000594828 V9GYV3 84 aa15.05■□□□□ -0
LSM4-204ENST00000594828 IGHV3-64A0A075B6Q5 118 aa15.04■□□□□ -0
LSM4-204ENST00000594828 ZNF25P17030 456 aaPredicted RBP15.04■□□□□ -0
LSM4-204ENST00000594828 RIGQ13278 110 aa15.04■□□□□ -0
LSM4-204ENST00000594828 FAM74A3Q4VXF1 159 aa15.04■□□□□ -0
LSM4-204ENST00000594828 MRAP2Q96G30 205 aa15.04■□□□□ -0
LSM4-204ENST00000594828 BTF3L4Q96K17 158 aa15.04■□□□□ -0
LSM4-204ENST00000594828 TSHBP01222 138 aa15.03■□□□□ -0
LSM4-204ENST00000594828 ESDP10768 282 aa15.03■□□□□ -0
LSM4-204ENST00000594828 RPL37AP61513 92 aaKnown RBP15.03■□□□□ -0
LSM4-204ENST00000594828 AMN1Q8IY45 258 aa15.03■□□□□ -0
LSM4-204ENST00000594828 C15orf56Q8N910 161 aa15.03■□□□□ -0
LSM4-204ENST00000594828 NUP35Q8NFH5 326 aa15.03■□□□□ -0
LSM4-204ENST00000594828 ISOC2Q96AB3 205 aa15.03■□□□□ -0
LSM4-204ENST00000594828 TMEM101Q96IK0 257 aa15.03■□□□□ -0
LSM4-204ENST00000594828 RPS10P46783 165 aaKnown RBP15.02■□□□□ -0
LSM4-204ENST00000594828 POLR2KP53803 58 aaKnown RBP15.02■□□□□ -0
LSM4-204ENST00000594828 DPH3Q96FX2 82 aa15.02■□□□□ -0
LSM4-204ENST00000594828 TMEM242Q9NWH2 141 aa15.02■□□□□ -0
LSM4-204ENST00000594828 RPL23P62829 140 aaKnown RBP15.01□□□□□ -0.01
LSM4-204ENST00000594828 OR5A1Q8NGJ0 315 aa15.01□□□□□ -0.01
LSM4-204ENST00000594828 TRBV27A0A0K0K1C4 114 aa15□□□□□ -0.01
LSM4-204ENST00000594828 CIRBPQ14011 172 aaKnown RBP15□□□□□ -0.01
LSM4-204ENST00000594828 NAT8BQ9UHF3 227 aa15□□□□□ -0.01
LSM4-204ENST00000594828 C9JQL5 133 aa14.99□□□□□ -0.01
LSM4-204ENST00000594828 ADIRFQ15847 76 aa14.99□□□□□ -0.01
LSM4-204ENST00000594828 NAT8Q9UHE5 227 aa14.99□□□□□ -0.01
LSM4-204ENST00000594828 HIGD2BQ4VC39 106 aa14.98□□□□□ -0.01
LSM4-204ENST00000594828 SMKR1H3BMG3 65 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms