RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 POM121L12Q8N7R1 296 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 SLC25A29Q8N8R3 303 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 TOMM6Q96B49 74 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 C20orf173Q96LM9 149 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 IMUPQ9GZP8 106 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
PNKP-204ENST00000594661 RPL11P62913 178 aaKnown RBP11.47□□□□□ -0.57
PNKP-204ENST00000594661 C9orf153Q5TBE3 101 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 ACANP16112 2415 aa11.46□□□□□ -0.57
PNKP-204ENST00000594661 HERVK_113P63121 156 aa11.46□□□□□ -0.57
PNKP-204ENST00000594661 RHPN1-AS1Q9BWJ2 59 aa11.46□□□□□ -0.57
PNKP-204ENST00000594661 DNAJC9-AS1A6NH13 148 aa11.45□□□□□ -0.58
PNKP-204ENST00000594661 DEFB121Q5J5C9 76 aa11.45□□□□□ -0.58
PNKP-204ENST00000594661 TMEM86BQ8N661 226 aa11.45□□□□□ -0.58
PNKP-204ENST00000594661 TMEM101Q96IK0 257 aa11.45□□□□□ -0.58
PNKP-204ENST00000594661 SCGB3A1Q96QR1 104 aa11.45□□□□□ -0.58
PNKP-204ENST00000594661 UQCRQO14949 82 aa11.45□□□□□ -0.58
PNKP-204ENST00000594661 RNF152Q8N8N0 203 aa11.45□□□□□ -0.58
PNKP-204ENST00000594661 KLHL30-AS1Q8NEE0 82 aa11.45□□□□□ -0.58
PNKP-204ENST00000594661 LINC00526Q96FQ7 95 aa11.45□□□□□ -0.58
PNKP-204ENST00000594661 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 SOCS3O14543 225 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 ZNF56Q15929 161 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 ORMDL2Q53FV1 153 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 OR13C6PQ8NH95 151 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 TMEM263Q8WUH6 116 aaKnown RBP11.44□□□□□ -0.58
PNKP-204ENST00000594661 ESM1Q9NQ30 184 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 C11orf21Q9P2W6 132 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 IGKV3-7A0A075B6H7 116 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 IGHV4OR15-8A0A075B7B6 117 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 A0A087WW49 117 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 A0A0B4J2C4 111 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 K7EMT4 169 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 UBE2E2Q96LR5 201 aa11.44□□□□□ -0.58
PNKP-204ENST00000594661 MYO9AB2RTY4 2548 aa11.43□□□□□ -0.58
PNKP-204ENST00000594661 EIF4EBP3O60516 100 aaPredicted RBP11.43□□□□□ -0.58
PNKP-204ENST00000594661 C18orf65Q6ZTR6 163 aa11.43□□□□□ -0.58
PNKP-204ENST00000594661 SMIM2Q9BVW6 85 aa11.43□□□□□ -0.58
PNKP-204ENST00000594661 FAM236AA0A1B0GUQ0 79 aa11.42□□□□□ -0.58
PNKP-204ENST00000594661 FAM236BA0A1B0GV22 79 aa11.42□□□□□ -0.58
PNKP-204ENST00000594661 A4D1N5 150 aa11.42□□□□□ -0.58
PNKP-204ENST00000594661 Q6ZSV7 163 aa11.42□□□□□ -0.58
PNKP-204ENST00000594661 OVOL1O14753 267 aa11.41□□□□□ -0.58
PNKP-204ENST00000594661 DEFB1P60022 68 aa11.41□□□□□ -0.58
PNKP-204ENST00000594661 LINC00477Q96M19 166 aa11.41□□□□□ -0.58
PNKP-204ENST00000594661 LENEPQ9Y5L5 61 aa11.41□□□□□ -0.58
PNKP-204ENST00000594661 SYNJ2BPP57105 145 aa11.41□□□□□ -0.58
PNKP-204ENST00000594661 HERVK_113P61574 105 aa11.41□□□□□ -0.58
PNKP-204ENST00000594661 TMEM170BQ5T4T1 132 aa11.41□□□□□ -0.58
PNKP-204ENST00000594661 PRR9Q5T870 116 aa11.41□□□□□ -0.58
PNKP-204ENST00000594661 NF1P21359 2839 aa11.4□□□□□ -0.58
PNKP-204ENST00000594661 H3BT86 120 aa11.4□□□□□ -0.58
PNKP-204ENST00000594661 ATP5G1P05496 136 aa11.4□□□□□ -0.58
PNKP-204ENST00000594661 HOXD3P31249 432 aaPredicted RBP11.4□□□□□ -0.58
PNKP-204ENST00000594661 DEFB136Q30KP8 78 aa11.4□□□□□ -0.58
PNKP-204ENST00000594661 HIST2H2BDQ6DRA6 164 aa11.4□□□□□ -0.58
PNKP-204ENST00000594661 TRGV11A0A075B6L2 103 aa11.39□□□□□ -0.59
PNKP-204ENST00000594661 TRAV26-2A0A0B4J265 109 aa11.39□□□□□ -0.59
PNKP-204ENST00000594661 EMP1P54849 157 aa11.39□□□□□ -0.59
PNKP-204ENST00000594661 PAPPA-AS1Q5QFB9 102 aa11.39□□□□□ -0.59
PNKP-204ENST00000594661 SMR3AQ99954 134 aa11.39□□□□□ -0.59
PNKP-204ENST00000594661 TRBV30A0A0K0K1B3 111 aa11.39□□□□□ -0.59
PNKP-204ENST00000594661 PMVKQ15126 192 aa11.39□□□□□ -0.59
PNKP-204ENST00000594661 AMELXQ99217 191 aa11.39□□□□□ -0.59
PNKP-204ENST00000594661 F6UB75 175 aa11.38□□□□□ -0.59
PNKP-204ENST00000594661 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
PNKP-204ENST00000594661 IGHV4-4A0A075B6R2 117 aa11.38□□□□□ -0.59
PNKP-204ENST00000594661 ZFAND2AQ8N6M9 145 aa11.38□□□□□ -0.59
PNKP-204ENST00000594661 IGLV4-69A0A075B6H9 119 aa11.37□□□□□ -0.59
PNKP-204ENST00000594661 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
PNKP-204ENST00000594661 TSPEAR-AS2P59090 65 aa11.37□□□□□ -0.59
PNKP-204ENST00000594661 ZNRF2Q8NHG8 242 aa11.37□□□□□ -0.59
PNKP-204ENST00000594661 CRYGDP07320 174 aa11.36□□□□□ -0.59
PNKP-204ENST00000594661 SLURP1P55000 103 aa11.36□□□□□ -0.59
PNKP-204ENST00000594661 KHDC1LQ5JSQ8 128 aa11.36□□□□□ -0.59
PNKP-204ENST00000594661 CEMP1Q6PRD7 247 aaPredicted RBP11.36□□□□□ -0.59
PNKP-204ENST00000594661 DCANP1Q8TF63 244 aa11.36□□□□□ -0.59
PNKP-204ENST00000594661 OTOGQ6ZRI0 2925 aa11.36□□□□□ -0.59
PNKP-204ENST00000594661 MTORP42345 2549 aa11.36□□□□□ -0.59
PNKP-204ENST00000594661 TRAV21A0A0B4J279 112 aa11.36□□□□□ -0.59
PNKP-204ENST00000594661 H7C423 109 aa11.36□□□□□ -0.59
PNKP-204ENST00000594661 C2orf66Q6UXQ4 117 aa11.36□□□□□ -0.59
PNKP-204ENST00000594661 KLK5Q9Y337 293 aaPredicted RBP11.36□□□□□ -0.59
PNKP-204ENST00000594661 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.35□□□□□ -0.59
PNKP-204ENST00000594661 ACYP1P07311 99 aa11.35□□□□□ -0.59
PNKP-204ENST00000594661 CRYGAP11844 174 aa11.35□□□□□ -0.59
PNKP-204ENST00000594661 SPANXN1Q5VSR9 72 aa11.35□□□□□ -0.59
PNKP-204ENST00000594661 DUX3Q96PT4 197 aa11.35□□□□□ -0.59
PNKP-204ENST00000594661 EDA2RQ9HAV5 297 aa11.35□□□□□ -0.59
PNKP-204ENST00000594661 RNASE4P34096 147 aaKnown RBP11.35□□□□□ -0.59
PNKP-204ENST00000594661 C4orf3Q8WVX3 66 aa11.35□□□□□ -0.59
PNKP-204ENST00000594661 COX7CP15954 63 aa11.34□□□□□ -0.59
PNKP-204ENST00000594661 SUMO2P61956 95 aaKnown RBP11.34□□□□□ -0.59
PNKP-204ENST00000594661 FAM19A4Q96LR4 140 aa11.34□□□□□ -0.59
PNKP-204ENST00000594661 H7C2G1 150 aa11.33□□□□□ -0.6
PNKP-204ENST00000594661 TRIAP1O43715 76 aa11.33□□□□□ -0.6
PNKP-204ENST00000594661 RNASE1P07998 156 aaKnown RBP11.33□□□□□ -0.6
PNKP-204ENST00000594661 C14orf178Q8N769 122 aaPredicted RBP11.33□□□□□ -0.6
PNKP-204ENST00000594661 NOTCH2Q04721 2471 aa11.33□□□□□ -0.6
PNKP-204ENST00000594661 Q1RN00 199 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms