RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 GAGE13Q4V321 117 aa14.62□□□□□ -0.07
PNKP-203ENST00000593946 TOMM6Q96B49 74 aa14.62□□□□□ -0.07
PNKP-203ENST00000593946 PHLDA1Q8WV24 401 aaPredicted RBP14.61□□□□□ -0.07
PNKP-203ENST00000593946 LINC00694P0DN24 101 aa14.61□□□□□ -0.07
PNKP-203ENST00000593946 G0S2P27469 103 aa14.61□□□□□ -0.07
PNKP-203ENST00000593946 C2orf66Q6UXQ4 117 aa14.61□□□□□ -0.07
PNKP-203ENST00000593946 DAZ4Q86SG3 579 aaKnown RBP14.61□□□□□ -0.07
PNKP-203ENST00000593946 DAZ3Q9NR90 486 aaKnown RBP14.61□□□□□ -0.07
PNKP-203ENST00000593946 IGHV3-38A0A0C4DH36 116 aa14.6□□□□□ -0.07
PNKP-203ENST00000593946 MAP1LC3CQ9BXW4 147 aa14.6□□□□□ -0.07
PNKP-203ENST00000593946 IFI27L1Q96BM0 104 aa14.59□□□□□ -0.07
PNKP-203ENST00000593946 COL7A1Q02388 2944 aa14.59□□□□□ -0.07
PNKP-203ENST00000593946 SYS1-DBNDD2H3BUS1 97 aa14.58□□□□□ -0.07
PNKP-203ENST00000593946 COTL1Q14019 142 aa14.58□□□□□ -0.07
PNKP-203ENST00000593946 Q8N976 141 aa14.58□□□□□ -0.07
PNKP-203ENST00000593946 CYSLTR1Q9Y271 337 aa14.58□□□□□ -0.07
PNKP-203ENST00000593946 LINC01549A6NIU2 74 aa14.58□□□□□ -0.08
PNKP-203ENST00000593946 C20orf203Q8NBC4 194 aa14.58□□□□□ -0.08
PNKP-203ENST00000593946 ZMAT4Q9H898 229 aa14.58□□□□□ -0.08
PNKP-203ENST00000593946 PAX4O43316 350 aa14.57□□□□□ -0.08
PNKP-203ENST00000593946 ATP5LO75964 103 aa14.57□□□□□ -0.08
PNKP-203ENST00000593946 SCGB1D1O95968 90 aa14.57□□□□□ -0.08
PNKP-203ENST00000593946 GYPEP15421 78 aa14.57□□□□□ -0.08
PNKP-203ENST00000593946 RPL39P62891 51 aaKnown RBP14.57□□□□□ -0.08
PNKP-203ENST00000593946 B9D2Q9BPU9 175 aa14.57□□□□□ -0.08
PNKP-203ENST00000593946 F5H768 121 aa14.56□□□□□ -0.08
PNKP-203ENST00000593946 SPATA12Q7Z6I5 190 aa14.56□□□□□ -0.08
PNKP-203ENST00000593946 VSIG2Q96IQ7 327 aa14.56□□□□□ -0.08
PNKP-203ENST00000593946 SCGB3A1Q96QR1 104 aa14.55□□□□□ -0.08
PNKP-203ENST00000593946 CHCHD7Q9BUK0 85 aa14.55□□□□□ -0.08
PNKP-203ENST00000593946 HTN3P15516 51 aa14.55□□□□□ -0.08
PNKP-203ENST00000593946 CDPF1Q6NVV7 123 aa14.55□□□□□ -0.08
PNKP-203ENST00000593946 PET117Q6UWS5 81 aa14.55□□□□□ -0.08
PNKP-203ENST00000593946 NTM-AS1Q6ZSK4 140 aa14.54□□□□□ -0.08
PNKP-203ENST00000593946 Q6ZTC4 211 aa14.54□□□□□ -0.08
PNKP-203ENST00000593946 ERASQ7Z444 233 aa14.54□□□□□ -0.08
PNKP-203ENST00000593946 HUWE1Q7Z6Z7 4374 aaKnown RBP14.54□□□□□ -0.08
PNKP-203ENST00000593946 TRAV26-1A0A087WT03 109 aa14.53□□□□□ -0.08
PNKP-203ENST00000593946 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.53□□□□□ -0.08
PNKP-203ENST00000593946 C11orf45Q8TAV5 145 aa14.53□□□□□ -0.08
PNKP-203ENST00000593946 GTSF1LQ9H1H1 148 aa14.53□□□□□ -0.08
PNKP-203ENST00000593946 A0A0J9YY99 117 aa14.52□□□□□ -0.08
PNKP-203ENST00000593946 IGIPA6NJ69 53 aa14.52□□□□□ -0.08
PNKP-203ENST00000593946 MEGF8Q7Z7M0 2845 aa14.52□□□□□ -0.08
PNKP-203ENST00000593946 H0Y8G0 127 aa14.52□□□□□ -0.09
PNKP-203ENST00000593946 TIMM17AQ99595 171 aa14.52□□□□□ -0.09
PNKP-203ENST00000593946 NANOS2P60321 138 aaKnown RBP14.51□□□□□ -0.09
PNKP-203ENST00000593946 LINC01545Q5VT33 79 aa14.51□□□□□ -0.09
PNKP-203ENST00000593946 LINC00469Q8N7U9 141 aa14.51□□□□□ -0.09
PNKP-203ENST00000593946 ATP6V0E2Q8NHE4 81 aa14.5□□□□□ -0.09
PNKP-203ENST00000593946 C20orf202A1L168 122 aa14.49□□□□□ -0.09
PNKP-203ENST00000593946 TMEM141Q96I45 108 aa14.49□□□□□ -0.09
PNKP-203ENST00000593946 STAB2Q8WWQ8 2551 aa14.49□□□□□ -0.09
PNKP-203ENST00000593946 PRSS1P07477 247 aa14.49□□□□□ -0.09
PNKP-203ENST00000593946 LGALS9CQ6DKI2 356 aa14.49□□□□□ -0.09
PNKP-203ENST00000593946 Q6ZN92 141 aa14.49□□□□□ -0.09
PNKP-203ENST00000593946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.48□□□□□ -0.09
PNKP-203ENST00000593946 IGKV2-29A2NJV5 120 aaPredicted RBP14.48□□□□□ -0.09
PNKP-203ENST00000593946 DEFA6Q01524 100 aa14.48□□□□□ -0.09
PNKP-203ENST00000593946 TEX43Q6ZNM6 134 aa14.48□□□□□ -0.09
PNKP-203ENST00000593946 PYGO1Q9Y3Y4 419 aa14.48□□□□□ -0.09
PNKP-203ENST00000593946 DNAH9Q9NYC9 4486 aa14.47□□□□□ -0.09
PNKP-203ENST00000593946 TMEM97Q5BJF2 176 aa14.47□□□□□ -0.09
PNKP-203ENST00000593946 BAALCQ8WXS3 180 aa14.47□□□□□ -0.09
PNKP-203ENST00000593946 TRBV6-8A0A0A6YYG3 113 aa14.46□□□□□ -0.09
PNKP-203ENST00000593946 UBE2D4Q9Y2X8 147 aa14.46□□□□□ -0.09
PNKP-203ENST00000593946 TRBV25-1A0A075B6N4 114 aa14.46□□□□□ -0.1
PNKP-203ENST00000593946 TSTD3H0UI37 97 aa14.46□□□□□ -0.1
PNKP-203ENST00000593946 H3BNG1 76 aa14.46□□□□□ -0.1
PNKP-203ENST00000593946 PKIAP61925 76 aa14.46□□□□□ -0.1
PNKP-203ENST00000593946 ODF1Q14990 250 aa14.46□□□□□ -0.1
PNKP-203ENST00000593946 MRPL23Q16540 153 aaKnown RBP14.46□□□□□ -0.1
PNKP-203ENST00000593946 TRAV12-1A0A0B4J245 112 aa14.45□□□□□ -0.1
PNKP-203ENST00000593946 PMCHL2Q9BQD1 86 aa14.45□□□□□ -0.1
PNKP-203ENST00000593946 TMEM243Q9BU79 118 aa14.45□□□□□ -0.1
PNKP-203ENST00000593946 SPANXA1Q9NS26 97 aa14.45□□□□□ -0.1
PNKP-203ENST00000593946 ICOSQ9Y6W8 199 aa14.45□□□□□ -0.1
PNKP-203ENST00000593946 DEFB131BA0A096LNP1 70 aa14.44□□□□□ -0.1
PNKP-203ENST00000593946 A0A096LPF7 62 aa14.44□□□□□ -0.1
PNKP-203ENST00000593946 FAM104AQ969W3 186 aa14.44□□□□□ -0.1
PNKP-203ENST00000593946 IGLV4-3A0A075B6K6 122 aa14.44□□□□□ -0.1
PNKP-203ENST00000593946 A0A087WX48 190 aa14.44□□□□□ -0.1
PNKP-203ENST00000593946 NPSP0C0P6 89 aa14.44□□□□□ -0.1
PNKP-203ENST00000593946 SH2D6Q7Z4S9 175 aa14.44□□□□□ -0.1
PNKP-203ENST00000593946 ATOH7Q8N100 152 aa14.44□□□□□ -0.1
PNKP-203ENST00000593946 OPRPNQ99935 248 aaPredicted RBP14.44□□□□□ -0.1
PNKP-203ENST00000593946 TIMM21Q9BVV7 248 aa14.44□□□□□ -0.1
PNKP-203ENST00000593946 NHLRC4P0CG21 123 aaPredicted RBP14.43□□□□□ -0.1
PNKP-203ENST00000593946 CEMP1Q6PRD7 247 aaPredicted RBP14.43□□□□□ -0.1
PNKP-203ENST00000593946 LBHQ53QV2 105 aaPredicted RBP14.42□□□□□ -0.1
PNKP-203ENST00000593946 MRPL52Q86TS9 123 aaKnown RBP14.42□□□□□ -0.1
PNKP-203ENST00000593946 H7C423 109 aa14.41□□□□□ -0.1
PNKP-203ENST00000593946 PMVKQ15126 192 aa14.41□□□□□ -0.1
PNKP-203ENST00000593946 PRKDCP78527 4128 aaKnown RBP14.41□□□□□ -0.1
PNKP-203ENST00000593946 TRAV10A0A0B4J240 114 aa14.41□□□□□ -0.1
PNKP-203ENST00000593946 PRSS29PA6NIE9 313 aa14.41□□□□□ -0.1
PNKP-203ENST00000593946 FGF6P10767 208 aa14.41□□□□□ -0.1
PNKP-203ENST00000593946 CSDC2Q9Y534 153 aaKnown RBP14.41□□□□□ -0.1
PNKP-203ENST00000593946 PAPPA-AS1Q5QFB9 102 aa14.4□□□□□ -0.1
PNKP-203ENST00000593946 ZC2HC1BQ5TFG8 222 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms