RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 B4DEV8 164 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 G3V3Q6 166 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 NDUFA1O15239 70 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 TSC22D2O75157 780 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 MED6O75586 246 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 CD3DP04234 171 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 GNAO1P09471 354 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 TPT1P13693 172 aaKnown RBP1.42□□□□□ -2.18
VRK3-204ENST00000593912 UBE2G2P60604 165 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 SSTP61278 116 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 PNRC1Q12796 327 aaPredicted RBP1.42□□□□□ -2.18
VRK3-204ENST00000593912 MLLT11Q13015 90 aaPredicted RBP1.42□□□□□ -2.18
VRK3-204ENST00000593912 PPP1R1AQ13522 171 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 MOBPQ13875 183 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 KIAA1644Q3SXP7 199 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 RNASE10Q5GAN6 216 aaKnown RBP1.42□□□□□ -2.18
VRK3-204ENST00000593912 Q6ZVH6 145 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 PRNTQ86SH4 94 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 SNX29P2Q8IUI4 249 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 CLVS1Q8IUQ0 354 aaPredicted RBP1.42□□□□□ -2.18
VRK3-204ENST00000593912 ZFP82Q8N141 532 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 TERB2Q8NHR7 220 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 PACRGQ96M98 296 aaPredicted RBP1.42□□□□□ -2.18
VRK3-204ENST00000593912 MED28Q9H204 178 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 C11orf1Q9H5F2 150 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 XAGE1AQ9HD64 81 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 SCN3BQ9NY72 215 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 PSENENQ9NZ42 101 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 C14orf166Q9Y224 244 aaKnown RBP1.42□□□□□ -2.18
VRK3-204ENST00000593912 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
VRK3-204ENST00000593912 IGKV2-28A0A075B6P5 120 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 IGLV9-49A0A0B4J1Y8 123 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 TRDV1A0A1B0GX56 115 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 FNDC10F2Z333 226 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 SSSCA1O60232 199 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 OR7C2O60412 319 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 SCO1O75880 301 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 IGKV2D-28P01615 120 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 COTL1Q14019 142 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 LRRC37A5PQ49AS3 106 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 SMUG1Q53HV7 270 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 TMEM14EPQ6UXP3 125 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 Q6ZNX1 250 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 FAM19A1Q7Z5A9 133 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 CBLN2Q8IUK8 224 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 OR10AG1Q8NH19 301 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 CMTM2Q8TAZ6 248 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 DYNC2LI1Q8TCX1 351 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 ORAOV1Q8WV07 137 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 ZCCHC13Q8WW36 166 aaKnown RBP1.41□□□□□ -2.18
VRK3-204ENST00000593912 NDFIP1Q9BT67 221 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 HIGD2AQ9BW72 106 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 GPR132Q9UNW8 380 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 ALG5Q9Y673 324 aa1.41□□□□□ -2.18
VRK3-204ENST00000593912 TRBV20-1A0A075B6N2 111 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 KRBOX1C9JBD0 128 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 TMEM238C9JI98 176 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 NDUFC2-KCTD14E9PQ53 114 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 K7EQM0 130 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 M0QY20 66 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 MGPP08493 103 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 SDC2P34741 201 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 TMBIM6P55061 237 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 UBE2L3P68036 154 aaKnown RBP1.4□□□□□ -2.19
VRK3-204ENST00000593912 IAH1Q2TAA2 248 aaPredicted RBP1.4□□□□□ -2.19
VRK3-204ENST00000593912 RNASE13Q5GAN3 156 aaKnown RBP1.4□□□□□ -2.19
VRK3-204ENST00000593912 DNLZQ5SXM8 178 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 C1orf146Q5VVC0 180 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 SUMO4Q6EEV6 95 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 C2orf82Q6UX34 121 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 C15orf40Q8WUR7 153 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 ANP32BQ92688 251 aaKnown RBP1.4□□□□□ -2.19
VRK3-204ENST00000593912 S100A16Q96FQ6 103 aaKnown RBP1.4□□□□□ -2.19
VRK3-204ENST00000593912 C9orf16Q9BUW7 83 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 LYRM2Q9NU23 88 aaPredicted RBP1.4□□□□□ -2.19
VRK3-204ENST00000593912 TXNL4BQ9NX01 149 aaKnown RBP1.4□□□□□ -2.19
VRK3-204ENST00000593912 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.19
VRK3-204ENST00000593912 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 FXYD6-FXYD2A0A087WZ82 144 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 UBE2L5PA0A1B0GUS4 154 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 NPSP0C0P6 89 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 OR5AL1P0C617 328 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 RPL29P47914 159 aaKnown RBP1.39□□□□□ -2.19
VRK3-204ENST00000593912 CRIP1P50238 77 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 RPL32P62910 135 aaKnown RBP1.39□□□□□ -2.19
VRK3-204ENST00000593912 BAXQ07812 192 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 TMEM241Q24JQ0 296 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 DNAL1Q4LDG9 190 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 C6orf99Q4VX62 202 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 UBE2NLQ5JXB2 153 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 SAMD12Q8N8I0 201 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 OR10D4PQ8NGN7 298 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 TIMM17AQ99595 171 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 SLC25A21Q9BQT8 299 aaPredicted RBP1.39□□□□□ -2.19
VRK3-204ENST00000593912 OTORQ9NRC9 128 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 NDUFB11Q9NX14 153 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 WDR83OSQ9Y284 106 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 KCNIP3Q9Y2W7 256 aa1.39□□□□□ -2.19
VRK3-204ENST00000593912 TRAV13-1A0A0B4J241 112 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 TRAV34A0A0B4J273 112 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms