RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 LINC00467Q9BRT7 94 aa13.98□□□□□ -0.17
LSM4-203ENST00000593829 CHAC1Q9BUX1 264 aa13.98□□□□□ -0.17
LSM4-203ENST00000593829 Q6ZTC4 211 aa13.98□□□□□ -0.17
LSM4-203ENST00000593829 RAB37Q96AX2 223 aa13.98□□□□□ -0.17
LSM4-203ENST00000593829 IGKV2D-26A0A0A0MRZ7 120 aa13.97□□□□□ -0.17
LSM4-203ENST00000593829 LYRM9A8MSI8 78 aa13.97□□□□□ -0.17
LSM4-203ENST00000593829 ORM1P02763 201 aa13.97□□□□□ -0.17
LSM4-203ENST00000593829 Q6ZQT7 251 aa13.97□□□□□ -0.17
LSM4-203ENST00000593829 TMEM238C9JI98 176 aa13.96□□□□□ -0.17
LSM4-203ENST00000593829 MSRB1Q9NZV6 116 aa13.96□□□□□ -0.17
LSM4-203ENST00000593829 KLK5Q9Y337 293 aaPredicted RBP13.96□□□□□ -0.17
LSM4-203ENST00000593829 FXYD2P54710 66 aa13.96□□□□□ -0.18
LSM4-203ENST00000593829 C18orf15Q96N68 181 aa13.96□□□□□ -0.18
LSM4-203ENST00000593829 NAA38Q9BRA0 125 aaKnown RBP13.96□□□□□ -0.18
LSM4-203ENST00000593829 IGHV1OR15-1A0A075B7D0 117 aa13.95□□□□□ -0.18
LSM4-203ENST00000593829 TRAV10A0A0B4J240 114 aa13.95□□□□□ -0.18
LSM4-203ENST00000593829 PRSS1P07477 247 aa13.95□□□□□ -0.18
LSM4-203ENST00000593829 GCSHP23434 173 aa13.95□□□□□ -0.18
LSM4-203ENST00000593829 ANXA2RQ3ZCQ2 193 aa13.95□□□□□ -0.18
LSM4-203ENST00000593829 TRBV25-1A0A075B6N4 114 aa13.94□□□□□ -0.18
LSM4-203ENST00000593829 CEND1Q8N111 149 aa13.94□□□□□ -0.18
LSM4-203ENST00000593829 IGHV4-4A0A075B6R2 117 aa13.94□□□□□ -0.18
LSM4-203ENST00000593829 DAD1P61803 113 aa13.94□□□□□ -0.18
LSM4-203ENST00000593829 NOP10Q9NPE3 64 aaKnown RBP13.94□□□□□ -0.18
LSM4-203ENST00000593829 STARD9Q9P2P6 4700 aa13.94□□□□□ -0.18
LSM4-203ENST00000593829 TRAV21A0A0B4J279 112 aa13.93□□□□□ -0.18
LSM4-203ENST00000593829 TENM2Q9NT68 2774 aa13.92□□□□□ -0.18
LSM4-203ENST00000593829 E9PLD3 99 aa13.92□□□□□ -0.18
LSM4-203ENST00000593829 GAS8-AS1O95177 125 aa13.92□□□□□ -0.18
LSM4-203ENST00000593829 TCTAP57738 103 aa13.92□□□□□ -0.18
LSM4-203ENST00000593829 FAM159AQ6UWV7 190 aa13.92□□□□□ -0.18
LSM4-203ENST00000593829 DEFB131BA0A096LNP1 70 aa13.92□□□□□ -0.18
LSM4-203ENST00000593829 ZC2HC1BQ5TFG8 222 aa13.92□□□□□ -0.18
LSM4-203ENST00000593829 DEFB130BP0DP73 79 aa13.91□□□□□ -0.18
LSM4-203ENST00000593829 DEFB130AP0DP74 79 aa13.91□□□□□ -0.18
LSM4-203ENST00000593829 NRACQ8N912 160 aa13.91□□□□□ -0.18
LSM4-203ENST00000593829 C11orf72Q8NBR9 251 aa13.91□□□□□ -0.18
LSM4-203ENST00000593829 A0A087WX48 190 aa13.9□□□□□ -0.18
LSM4-203ENST00000593829 IGKV3D-20A0A0C4DH25 116 aa13.9□□□□□ -0.18
LSM4-203ENST00000593829 SCGB1A1P11684 91 aa13.9□□□□□ -0.18
LSM4-203ENST00000593829 DAZ2Q13117 558 aaKnown RBP13.9□□□□□ -0.18
LSM4-203ENST00000593829 LAGE3Q14657 143 aa13.9□□□□□ -0.18
LSM4-203ENST00000593829 TRAV12-1A0A0B4J245 112 aa13.89□□□□□ -0.19
LSM4-203ENST00000593829 F8W1H4 67 aa13.89□□□□□ -0.19
LSM4-203ENST00000593829 PLNP26678 52 aa13.89□□□□□ -0.19
LSM4-203ENST00000593829 TRGV11A0A075B6L2 103 aa13.88□□□□□ -0.19
LSM4-203ENST00000593829 IGLL5B9A064 214 aa13.88□□□□□ -0.19
LSM4-203ENST00000593829 GATA1P15976 413 aaPredicted RBP13.88□□□□□ -0.19
LSM4-203ENST00000593829 MRPL35Q9NZE8 188 aaKnown RBP13.88□□□□□ -0.19
LSM4-203ENST00000593829 A0A1B0GWB2 263 aa13.87□□□□□ -0.19
LSM4-203ENST00000593829 HTN3P15516 51 aa13.87□□□□□ -0.19
LSM4-203ENST00000593829 ZNF415Q09FC8 603 aa13.87□□□□□ -0.19
LSM4-203ENST00000593829 LINC00612Q8N6U2 182 aa13.87□□□□□ -0.19
LSM4-203ENST00000593829 MRAP2Q96G30 205 aa13.87□□□□□ -0.19
LSM4-203ENST00000593829 TTTY13Q9BZ97 58 aa13.87□□□□□ -0.19
LSM4-203ENST00000593829 NHP2Q9NX24 153 aaKnown RBP13.86□□□□□ -0.19
LSM4-203ENST00000593829 C11orf21Q9P2W6 132 aa13.86□□□□□ -0.19
LSM4-203ENST00000593829 K7EMI3 77 aa13.86□□□□□ -0.19
LSM4-203ENST00000593829 MDFICQ9P1T7 246 aa13.86□□□□□ -0.19
LSM4-203ENST00000593829 GAGE7O76087 117 aa13.85□□□□□ -0.19
LSM4-203ENST00000593829 GAGE12FP0CL80 117 aa13.85□□□□□ -0.19
LSM4-203ENST00000593829 GAGE12GP0CL81 117 aa13.85□□□□□ -0.19
LSM4-203ENST00000593829 GAGE12IP0CL82 117 aa13.85□□□□□ -0.19
LSM4-203ENST00000593829 CHTOPQ9Y3Y2 248 aaKnown RBP13.85□□□□□ -0.19
LSM4-203ENST00000593829 DYNC2H1Q8NCM8 4307 aaKnown RBP13.84□□□□□ -0.19
LSM4-203ENST00000593829 J3QR89 54 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 K7ERJ3 54 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 GNRH2O43555 120 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 ATP5G1P05496 136 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 Q6ZTI0 123 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 MAPKAPK5-AS1Q8N8E1 139 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 TRBV7-3A0A075B6L6 115 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 TRGV1A0A0A0MS02 117 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 H7C1H1 209 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 ZNF479Q96JC4 524 aa13.84□□□□□ -0.19
LSM4-203ENST00000593829 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
LSM4-203ENST00000593829 F8VRH5 84 aa13.83□□□□□ -0.2
LSM4-203ENST00000593829 RPL24P83731 157 aaKnown RBP13.83□□□□□ -0.2
LSM4-203ENST00000593829 IGHV3-16A0A0C4DH30 117 aa13.82□□□□□ -0.2
LSM4-203ENST00000593829 LCE6AA0A183 80 aa13.82□□□□□ -0.2
LSM4-203ENST00000593829 SPXQ9BT56 116 aa13.82□□□□□ -0.2
LSM4-203ENST00000593829 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.82□□□□□ -0.2
LSM4-203ENST00000593829 ORMDL2Q53FV1 153 aa13.82□□□□□ -0.2
LSM4-203ENST00000593829 SMIM2Q9BVW6 85 aa13.82□□□□□ -0.2
LSM4-203ENST00000593829 APLNQ9ULZ1 77 aa13.82□□□□□ -0.2
LSM4-203ENST00000593829 KMT2CQ8NEZ4 4911 aaKnown RBP13.81□□□□□ -0.2
LSM4-203ENST00000593829 TRGV2A0A075B6R0 118 aa13.81□□□□□ -0.2
LSM4-203ENST00000593829 F5H768 121 aa13.81□□□□□ -0.2
LSM4-203ENST00000593829 CIDEAO60543 219 aa13.81□□□□□ -0.2
LSM4-203ENST00000593829 C20orf78Q9BR46 151 aa13.81□□□□□ -0.2
LSM4-203ENST00000593829 SIGMAR1Q99720 223 aa13.8□□□□□ -0.2
LSM4-203ENST00000593829 MRPL16Q9NX20 251 aaKnown RBP13.8□□□□□ -0.2
LSM4-203ENST00000593829 TOMM6Q96B49 74 aa13.8□□□□□ -0.2
LSM4-203ENST00000593829 MYMXA0A1B0GTQ4 84 aa13.79□□□□□ -0.2
LSM4-203ENST00000593829 PLECQ15149 4684 aaKnown RBP13.79□□□□□ -0.2
LSM4-203ENST00000593829 SPANXN1Q5VSR9 72 aa13.79□□□□□ -0.2
LSM4-203ENST00000593829 MED14OSP0DP75 135 aa13.78□□□□□ -0.2
LSM4-203ENST00000593829 HIST1H4GQ99525 98 aa13.78□□□□□ -0.2
LSM4-203ENST00000593829 M0R381 172 aa13.78□□□□□ -0.2
LSM4-203ENST00000593829 NEXN-AS1Q8NBZ9 246 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms