RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PRADC1Q9BSG0 188 aa9.48□□□□□ -0.89
VMP1-217ENST00000593168 Q9UF83 564 aa9.48□□□□□ -0.89
VMP1-217ENST00000593168 HHLA3Q9XRX5 114 aa9.48□□□□□ -0.89
VMP1-217ENST00000593168 A0A096LNJ9 63 aa9.47□□□□□ -0.89
VMP1-217ENST00000593168 HBDP02042 147 aa9.47□□□□□ -0.89
VMP1-217ENST00000593168 G0S2P27469 103 aa9.47□□□□□ -0.89
VMP1-217ENST00000593168 AKR1D1P51857 326 aa9.47□□□□□ -0.89
VMP1-217ENST00000593168 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
VMP1-217ENST00000593168 C12orf74Q32Q52 190 aa9.47□□□□□ -0.89
VMP1-217ENST00000593168 ZNRF2Q8NHG8 242 aa9.47□□□□□ -0.89
VMP1-217ENST00000593168 PRO0255Q9UI72 69 aa9.47□□□□□ -0.89
VMP1-217ENST00000593168 A0A0J9YWU9 116 aa9.46□□□□□ -0.9
VMP1-217ENST00000593168 LEPROTL1O95214 131 aa9.46□□□□□ -0.9
VMP1-217ENST00000593168 CRYBA4P53673 196 aa9.46□□□□□ -0.9
VMP1-217ENST00000593168 NEGR1Q7Z3B1 354 aa9.46□□□□□ -0.9
VMP1-217ENST00000593168 NUDT3O95989 172 aa9.45□□□□□ -0.9
VMP1-217ENST00000593168 UBE2D3P61077 147 aa9.45□□□□□ -0.9
VMP1-217ENST00000593168 UBE2D2P62837 147 aa9.45□□□□□ -0.9
VMP1-217ENST00000593168 DAZ4Q86SG3 579 aaKnown RBP9.45□□□□□ -0.9
VMP1-217ENST00000593168 DAZ3Q9NR90 486 aaKnown RBP9.45□□□□□ -0.9
VMP1-217ENST00000593168 HSPB8Q9UJY1 196 aa9.45□□□□□ -0.9
VMP1-217ENST00000593168 HERC2O95714 4834 aa9.45□□□□□ -0.9
VMP1-217ENST00000593168 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
VMP1-217ENST00000593168 LINC01549A6NIU2 74 aa9.44□□□□□ -0.9
VMP1-217ENST00000593168 TSHBP01222 138 aa9.44□□□□□ -0.9
VMP1-217ENST00000593168 GAGE1Q13065 139 aa9.44□□□□□ -0.9
VMP1-217ENST00000593168 GAGE4Q13068 117 aa9.44□□□□□ -0.9
VMP1-217ENST00000593168 GAGE5Q13069 117 aa9.44□□□□□ -0.9
VMP1-217ENST00000593168 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
VMP1-217ENST00000593168 FRAS1Q86XX4 4008 aa9.44□□□□□ -0.9
VMP1-217ENST00000593168 PAX4O43316 350 aa9.43□□□□□ -0.9
VMP1-217ENST00000593168 LINC00694P0DN24 101 aa9.43□□□□□ -0.9
VMP1-217ENST00000593168 BTF3P20290 206 aaKnown RBP9.43□□□□□ -0.9
VMP1-217ENST00000593168 C11orf45Q8TAV5 145 aa9.43□□□□□ -0.9
VMP1-217ENST00000593168 F5H768 121 aa9.42□□□□□ -0.9
VMP1-217ENST00000593168 COTL1Q14019 142 aa9.42□□□□□ -0.9
VMP1-217ENST00000593168 PHLDA1Q8WV24 401 aaPredicted RBP9.42□□□□□ -0.9
VMP1-217ENST00000593168 TOMM6Q96B49 74 aa9.42□□□□□ -0.9
VMP1-217ENST00000593168 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
VMP1-217ENST00000593168 GYPEP15421 78 aa9.41□□□□□ -0.9
VMP1-217ENST00000593168 C2orf66Q6UXQ4 117 aa9.41□□□□□ -0.9
VMP1-217ENST00000593168 VSIG2Q96IQ7 327 aa9.41□□□□□ -0.9
VMP1-217ENST00000593168 CYSLTR1Q9Y271 337 aa9.41□□□□□ -0.9
VMP1-217ENST00000593168 IGHV3-38A0A0C4DH36 116 aa9.4□□□□□ -0.9
VMP1-217ENST00000593168 ATP5LO75964 103 aa9.4□□□□□ -0.9
VMP1-217ENST00000593168 C3orf79P0CE67 100 aa9.4□□□□□ -0.9
VMP1-217ENST00000593168 HTN3P15516 51 aa9.4□□□□□ -0.9
VMP1-217ENST00000593168 JOSD1Q15040 202 aaPredicted RBP9.4□□□□□ -0.9
VMP1-217ENST00000593168 LINC00173Q6ZV60 143 aa9.4□□□□□ -0.9
VMP1-217ENST00000593168 C20orf203Q8NBC4 194 aa9.4□□□□□ -0.9
VMP1-217ENST00000593168 MAP1LC3CQ9BXW4 147 aa9.4□□□□□ -0.9
VMP1-217ENST00000593168 GTSF1LQ9H1H1 148 aa9.4□□□□□ -0.9
VMP1-217ENST00000593168 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
VMP1-217ENST00000593168 KRTDAPP60985 99 aa9.39□□□□□ -0.91
VMP1-217ENST00000593168 TMEM97Q5BJF2 176 aa9.39□□□□□ -0.91
VMP1-217ENST00000593168 Q6ZTC4 211 aa9.39□□□□□ -0.91
VMP1-217ENST00000593168 DEFB104AQ8WTQ1 72 aa9.39□□□□□ -0.91
VMP1-217ENST00000593168 IFI27L1Q96BM0 104 aa9.39□□□□□ -0.91
VMP1-217ENST00000593168 H3BNG1 76 aa9.38□□□□□ -0.91
VMP1-217ENST00000593168 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
VMP1-217ENST00000593168 NANOS2P60321 138 aaKnown RBP9.38□□□□□ -0.91
VMP1-217ENST00000593168 PYY3Q5JQD4 70 aa9.38□□□□□ -0.91
VMP1-217ENST00000593168 PET117Q6UWS5 81 aa9.38□□□□□ -0.91
VMP1-217ENST00000593168 ERASQ7Z444 233 aa9.38□□□□□ -0.91
VMP1-217ENST00000593168 SPATA12Q7Z6I5 190 aa9.38□□□□□ -0.91
VMP1-217ENST00000593168 ATP6V0E2Q8NHE4 81 aa9.38□□□□□ -0.91
VMP1-217ENST00000593168 SCGB3A1Q96QR1 104 aa9.38□□□□□ -0.91
VMP1-217ENST00000593168 CHCHD7Q9BUK0 85 aa9.38□□□□□ -0.91
VMP1-217ENST00000593168 A0A0J9YY99 117 aa9.37□□□□□ -0.91
VMP1-217ENST00000593168 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.37□□□□□ -0.91
VMP1-217ENST00000593168 SMIM6P0DI80 62 aa9.37□□□□□ -0.91
VMP1-217ENST00000593168 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
VMP1-217ENST00000593168 NTM-AS1Q6ZSK4 140 aa9.37□□□□□ -0.91
VMP1-217ENST00000593168 SH2D6Q7Z4S9 175 aa9.37□□□□□ -0.91
VMP1-217ENST00000593168 TIMM17AQ99595 171 aa9.37□□□□□ -0.91
VMP1-217ENST00000593168 PCLOQ9Y6V0 5065 aa9.36□□□□□ -0.91
VMP1-217ENST00000593168 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
VMP1-217ENST00000593168 RPL39P62891 51 aaKnown RBP9.36□□□□□ -0.91
VMP1-217ENST00000593168 TMEM141Q96I45 108 aa9.36□□□□□ -0.91
VMP1-217ENST00000593168 PYGO1Q9Y3Y4 419 aa9.36□□□□□ -0.91
VMP1-217ENST00000593168 DEFB131BA0A096LNP1 70 aa9.35□□□□□ -0.91
VMP1-217ENST00000593168 TRAV10A0A0B4J240 114 aa9.35□□□□□ -0.91
VMP1-217ENST00000593168 SCGB1D1O95968 90 aa9.35□□□□□ -0.91
VMP1-217ENST00000593168 NPSP0C0P6 89 aa9.35□□□□□ -0.91
VMP1-217ENST00000593168 Q8N976 141 aa9.35□□□□□ -0.91
VMP1-217ENST00000593168 ICOSQ9Y6W8 199 aa9.35□□□□□ -0.91
VMP1-217ENST00000593168 TRBV25-1A0A075B6N4 114 aa9.34□□□□□ -0.91
VMP1-217ENST00000593168 A0A096LPF7 62 aa9.34□□□□□ -0.91
VMP1-217ENST00000593168 TRBV6-8A0A0A6YYG3 113 aa9.34□□□□□ -0.91
VMP1-217ENST00000593168 H7C423 109 aa9.34□□□□□ -0.91
VMP1-217ENST00000593168 PRSS1P07477 247 aa9.34□□□□□ -0.91
VMP1-217ENST00000593168 Q6ZN92 141 aa9.34□□□□□ -0.91
VMP1-217ENST00000593168 TMEM243Q9BU79 118 aa9.34□□□□□ -0.91
VMP1-217ENST00000593168 TIMM21Q9BVV7 248 aa9.34□□□□□ -0.91
VMP1-217ENST00000593168 SPANXA1Q9NS26 97 aa9.34□□□□□ -0.91
VMP1-217ENST00000593168 KMT2AQ03164 3969 aa9.33□□□□□ -0.92
VMP1-217ENST00000593168 HECTD4Q9Y4D8 3996 aa9.33□□□□□ -0.92
VMP1-217ENST00000593168 C20orf202A1L168 122 aa9.33□□□□□ -0.92
VMP1-217ENST00000593168 SMAGPQ0VAQ4 97 aa9.33□□□□□ -0.92
VMP1-217ENST00000593168 LINC01545Q5VT33 79 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms