RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 GAS8-AS1O95177 125 aa6.98□□□□□ -1.29
PRKCSH-220ENST00000593104 RPS10P46783 165 aaKnown RBP6.98□□□□□ -1.29
PRKCSH-220ENST00000593104 AMTP48728 403 aa6.98□□□□□ -1.29
PRKCSH-220ENST00000593104 CCL20P78556 96 aa6.98□□□□□ -1.29
PRKCSH-220ENST00000593104 WDR73Q6P4I2 378 aa6.98□□□□□ -1.29
PRKCSH-220ENST00000593104 RASL11AQ6T310 242 aa6.98□□□□□ -1.29
PRKCSH-220ENST00000593104 OR2D3Q8NGH3 330 aa6.98□□□□□ -1.29
PRKCSH-220ENST00000593104 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 IGKV2-29A2NJV5 120 aaPredicted RBP6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 RAB19A4D1S5 217 aa6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 UBE2L6O14933 153 aa6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 PFDN1O60925 122 aa6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 S100A9P06702 114 aaKnown RBP6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 KRTAP10-8P60410 259 aa6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 CENPWQ5EE01 88 aa6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 Q6ZNX1 250 aa6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 MBD3L1Q8WWY6 194 aa6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 CHCHD10Q8WYQ3 142 aaPredicted RBP6.97□□□□□ -1.29
PRKCSH-220ENST00000593104 H7C1H1 209 aa6.96□□□□□ -1.3
PRKCSH-220ENST00000593104 LYZL1Q6UWQ5 148 aa6.96□□□□□ -1.3
PRKCSH-220ENST00000593104 KCNRGQ8N5I3 272 aa6.96□□□□□ -1.3
PRKCSH-220ENST00000593104 RPL39LQ96EH5 51 aaKnown RBP6.96□□□□□ -1.3
PRKCSH-220ENST00000593104 C19orf71A6NCJ1 209 aa6.95□□□□□ -1.3
PRKCSH-220ENST00000593104 NTF3P20783 257 aa6.95□□□□□ -1.3
PRKCSH-220ENST00000593104 FOXA3P55318 350 aaPredicted RBP6.95□□□□□ -1.3
PRKCSH-220ENST00000593104 COTL1Q14019 142 aa6.95□□□□□ -1.3
PRKCSH-220ENST00000593104 NIT2Q9NQR4 276 aa6.95□□□□□ -1.3
PRKCSH-220ENST00000593104 GNG13Q9P2W3 67 aa6.95□□□□□ -1.3
PRKCSH-220ENST00000593104 GVQW2A0A096LPI5 108 aaPredicted RBP6.94□□□□□ -1.3
PRKCSH-220ENST00000593104 CACNG7P62955 275 aa6.94□□□□□ -1.3
PRKCSH-220ENST00000593104 FOXI1Q12951 378 aa6.94□□□□□ -1.3
PRKCSH-220ENST00000593104 RNASEKQ6P5S7 137 aaKnown RBP6.94□□□□□ -1.3
PRKCSH-220ENST00000593104 GATD1Q8NB37 220 aa6.94□□□□□ -1.3
PRKCSH-220ENST00000593104 PGLYRP4Q96LB8 373 aa6.94□□□□□ -1.3
PRKCSH-220ENST00000593104 TRBV20OR9-2A0A075B6H5 130 aa6.93□□□□□ -1.3
PRKCSH-220ENST00000593104 H2AFB1P0C5Y9 115 aa6.93□□□□□ -1.3
PRKCSH-220ENST00000593104 XCL1P47992 114 aa6.93□□□□□ -1.3
PRKCSH-220ENST00000593104 SRSF9Q13242 221 aaKnown RBP eCLIP6.93□□□□□ -1.3
PRKCSH-220ENST00000593104 CFAP161Q6P656 301 aa6.93□□□□□ -1.3
PRKCSH-220ENST00000593104 C11orf52Q96A22 123 aa6.93□□□□□ -1.3
PRKCSH-220ENST00000593104 LPAP08519 4548 aa6.93□□□□□ -1.3
PRKCSH-220ENST00000593104 IFNA1P01562 189 aa6.92□□□□□ -1.3
PRKCSH-220ENST00000593104 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
PRKCSH-220ENST00000593104 SPINK6Q6UWN8 80 aa6.92□□□□□ -1.3
PRKCSH-220ENST00000593104 TRGC1P0CF51 173 aa6.91□□□□□ -1.3
PRKCSH-220ENST00000593104 FGF6P10767 208 aa6.91□□□□□ -1.3
PRKCSH-220ENST00000593104 RPS20P60866 119 aaKnown RBP6.91□□□□□ -1.3
PRKCSH-220ENST00000593104 TWIST1Q15672 202 aa6.91□□□□□ -1.3
PRKCSH-220ENST00000593104 UMAD1C9J7I0 102 aa6.9□□□□□ -1.3
PRKCSH-220ENST00000593104 CCL25O15444 150 aa6.9□□□□□ -1.3
PRKCSH-220ENST00000593104 GNG4P50150 75 aa6.9□□□□□ -1.3
PRKCSH-220ENST00000593104 REG3GQ6UW15 175 aa6.9□□□□□ -1.3
PRKCSH-220ENST00000593104 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
PRKCSH-220ENST00000593104 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
PRKCSH-220ENST00000593104 CARD19Q96LW7 228 aa6.9□□□□□ -1.3
PRKCSH-220ENST00000593104 A0A1W2PNN7 141 aa6.89□□□□□ -1.31
PRKCSH-220ENST00000593104 FAM231BA6NCW3 169 aa6.89□□□□□ -1.31
PRKCSH-220ENST00000593104 BCL2L11O43521 198 aa6.89□□□□□ -1.31
PRKCSH-220ENST00000593104 CTRLP40313 264 aa6.89□□□□□ -1.31
PRKCSH-220ENST00000593104 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
PRKCSH-220ENST00000593104 Q6ZRP5 223 aa6.89□□□□□ -1.31
PRKCSH-220ENST00000593104 RNASE7Q9H1E1 156 aaKnown RBP6.89□□□□□ -1.31
PRKCSH-220ENST00000593104 LINC00959A0A1B0GUT2 108 aa6.88□□□□□ -1.31
PRKCSH-220ENST00000593104 F2Z2F3 143 aa6.88□□□□□ -1.31
PRKCSH-220ENST00000593104 APCSP02743 223 aa6.88□□□□□ -1.31
PRKCSH-220ENST00000593104 BCL2P10415 239 aa6.88□□□□□ -1.31
PRKCSH-220ENST00000593104 ZNF345Q14585 488 aa6.88□□□□□ -1.31
PRKCSH-220ENST00000593104 C9orf62Q8N4C0 152 aa6.88□□□□□ -1.31
PRKCSH-220ENST00000593104 MANBALQ9NQG1 85 aa6.88□□□□□ -1.31
PRKCSH-220ENST00000593104 MED9Q9NWA0 146 aa6.88□□□□□ -1.31
PRKCSH-220ENST00000593104 KANTRA0A1W2PQU2 76 aa6.87□□□□□ -1.31
PRKCSH-220ENST00000593104 SDHAF1A6NFY7 115 aa6.87□□□□□ -1.31
PRKCSH-220ENST00000593104 K7EN84 100 aa6.87□□□□□ -1.31
PRKCSH-220ENST00000593104 PTTG1IPP53801 180 aa6.87□□□□□ -1.31
PRKCSH-220ENST00000593104 OR5A1Q8NGJ0 315 aa6.87□□□□□ -1.31
PRKCSH-220ENST00000593104 TMEM242Q9NWH2 141 aa6.87□□□□□ -1.31
PRKCSH-220ENST00000593104 IGHV1-58A0A0C4DH39 117 aa6.86□□□□□ -1.31
PRKCSH-220ENST00000593104 XKRY2A2RUG3 117 aa6.86□□□□□ -1.31
PRKCSH-220ENST00000593104 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
PRKCSH-220ENST00000593104 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
PRKCSH-220ENST00000593104 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
PRKCSH-220ENST00000593104 IGLV4-69A0A075B6H9 119 aa6.85□□□□□ -1.31
PRKCSH-220ENST00000593104 TSHBP01222 138 aa6.85□□□□□ -1.31
PRKCSH-220ENST00000593104 MEF2BQ02080 365 aaPredicted RBP6.85□□□□□ -1.31
PRKCSH-220ENST00000593104 RGS21Q2M5E4 152 aa6.85□□□□□ -1.31
PRKCSH-220ENST00000593104 PRR26Q8N8Z3 221 aa6.85□□□□□ -1.31
PRKCSH-220ENST00000593104 CNFNQ9BYD5 112 aa6.85□□□□□ -1.31
PRKCSH-220ENST00000593104 RPP21Q9H633 154 aaKnown RBP6.85□□□□□ -1.31
PRKCSH-220ENST00000593104 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
PRKCSH-220ENST00000593104 ZNF561-AS1K7EIQ3 104 aa6.84□□□□□ -1.31
PRKCSH-220ENST00000593104 NCR2O95944 276 aa6.84□□□□□ -1.31
PRKCSH-220ENST00000593104 PMCHP20382 165 aa6.84□□□□□ -1.31
PRKCSH-220ENST00000593104 CAMPP49913 170 aa6.84□□□□□ -1.31
PRKCSH-220ENST00000593104 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
PRKCSH-220ENST00000593104 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
PRKCSH-220ENST00000593104 LINC00474Q9P2X8 69 aa6.84□□□□□ -1.31
PRKCSH-220ENST00000593104 TRAV1-1A0A0B4J248 108 aa6.83□□□□□ -1.32
PRKCSH-220ENST00000593104 HMSDA8MTL9 139 aa6.83□□□□□ -1.32
PRKCSH-220ENST00000593104 H7C423 109 aa6.83□□□□□ -1.32
PRKCSH-220ENST00000593104 I3L3M4 83 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms