RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 GFRA4Q9GZZ7 299 aa10.37□□□□□ -0.75
CIRBP-240ENST00000592815 RNASE7Q9H1E1 156 aaKnown RBP10.37□□□□□ -0.75
CIRBP-240ENST00000592815 RPP21Q9H633 154 aaKnown RBP10.37□□□□□ -0.75
CIRBP-240ENST00000592815 K7EN84 100 aa10.36□□□□□ -0.75
CIRBP-240ENST00000592815 UBE2L6O14933 153 aa10.36□□□□□ -0.75
CIRBP-240ENST00000592815 COTL1Q14019 142 aa10.36□□□□□ -0.75
CIRBP-240ENST00000592815 AMTP48728 403 aa10.35□□□□□ -0.75
CIRBP-240ENST00000592815 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
CIRBP-240ENST00000592815 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
CIRBP-240ENST00000592815 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
CIRBP-240ENST00000592815 TRAV26-2A0A0B4J265 109 aa10.34□□□□□ -0.75
CIRBP-240ENST00000592815 hDV102S1A0JD36 115 aa10.34□□□□□ -0.75
CIRBP-240ENST00000592815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
CIRBP-240ENST00000592815 RPL37AP61513 92 aaKnown RBP10.33□□□□□ -0.76
CIRBP-240ENST00000592815 GTSF1Q8WW33 167 aa10.33□□□□□ -0.76
CIRBP-240ENST00000592815 PANO1I0J062 215 aa10.32□□□□□ -0.76
CIRBP-240ENST00000592815 FOXA3P55318 350 aaPredicted RBP10.32□□□□□ -0.76
CIRBP-240ENST00000592815 CNBPP62633 177 aaKnown RBP10.32□□□□□ -0.76
CIRBP-240ENST00000592815 Q6ZNX1 250 aa10.32□□□□□ -0.76
CIRBP-240ENST00000592815 SMIM15Q7Z3B0 74 aa10.32□□□□□ -0.76
CIRBP-240ENST00000592815 AP5S1Q9NUS5 200 aa10.32□□□□□ -0.76
CIRBP-240ENST00000592815 LRP1Q07954 4544 aaKnown RBP10.32□□□□□ -0.76
CIRBP-240ENST00000592815 GATCO43716 136 aaKnown RBP10.31□□□□□ -0.76
CIRBP-240ENST00000592815 BLOC1S1P78537 153 aa10.31□□□□□ -0.76
CIRBP-240ENST00000592815 RPL39LQ96EH5 51 aaKnown RBP10.31□□□□□ -0.76
CIRBP-240ENST00000592815 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
CIRBP-240ENST00000592815 IGKV3OR2-268A0A0C4DH90 116 aa10.3□□□□□ -0.76
CIRBP-240ENST00000592815 TMEM250H0YL14 139 aa10.3□□□□□ -0.76
CIRBP-240ENST00000592815 OXTP01178 125 aa10.3□□□□□ -0.76
CIRBP-240ENST00000592815 SLPIP03973 132 aa10.3□□□□□ -0.76
CIRBP-240ENST00000592815 ALKAL2Q6UX46 152 aa10.3□□□□□ -0.76
CIRBP-240ENST00000592815 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.29□□□□□ -0.76
CIRBP-240ENST00000592815 GAGE12HA6NDE8 117 aa10.29□□□□□ -0.76
CIRBP-240ENST00000592815 CEBPGP53567 150 aa10.29□□□□□ -0.76
CIRBP-240ENST00000592815 AMMECR1LQ6DCA0 310 aa10.29□□□□□ -0.76
CIRBP-240ENST00000592815 AKAP14Q86UN6 197 aa10.29□□□□□ -0.76
CIRBP-240ENST00000592815 IGHV3-64A0A075B6Q5 118 aa10.28□□□□□ -0.76
CIRBP-240ENST00000592815 A8MWL6 223 aa10.28□□□□□ -0.76
CIRBP-240ENST00000592815 RNASEKQ6P5S7 137 aaKnown RBP10.28□□□□□ -0.76
CIRBP-240ENST00000592815 TEX261Q6UWH6 196 aa10.28□□□□□ -0.76
CIRBP-240ENST00000592815 FAM231DQ6ZW35 169 aa10.28□□□□□ -0.76
CIRBP-240ENST00000592815 hCG_2014768A0A024R1R8 64 aa10.27□□□□□ -0.77
CIRBP-240ENST00000592815 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.27□□□□□ -0.77
CIRBP-240ENST00000592815 IGKV2-29A2NJV5 120 aaPredicted RBP10.27□□□□□ -0.77
CIRBP-240ENST00000592815 SDHAF1A6NFY7 115 aa10.27□□□□□ -0.77
CIRBP-240ENST00000592815 NCR2O95944 276 aa10.27□□□□□ -0.77
CIRBP-240ENST00000592815 CFAP161Q6P656 301 aa10.27□□□□□ -0.77
CIRBP-240ENST00000592815 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
CIRBP-240ENST00000592815 APCSP02743 223 aa10.26□□□□□ -0.77
CIRBP-240ENST00000592815 PMCHP20382 165 aa10.26□□□□□ -0.77
CIRBP-240ENST00000592815 HNRNPA3P51991 378 aaKnown RBP10.26□□□□□ -0.77
CIRBP-240ENST00000592815 LYPD6BQ8NI32 183 aa10.26□□□□□ -0.77
CIRBP-240ENST00000592815 H7C423 109 aa10.25□□□□□ -0.77
CIRBP-240ENST00000592815 CHTF8P0CG12 524 aa10.25□□□□□ -0.77
CIRBP-240ENST00000592815 FGF6P10767 208 aa10.25□□□□□ -0.77
CIRBP-240ENST00000592815 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
CIRBP-240ENST00000592815 C15orf56Q8N910 161 aa10.25□□□□□ -0.77
CIRBP-240ENST00000592815 CHCHD10Q8WYQ3 142 aaPredicted RBP10.25□□□□□ -0.77
CIRBP-240ENST00000592815 I3L3M4 83 aa10.24□□□□□ -0.77
CIRBP-240ENST00000592815 CT83Q5H943 113 aa10.24□□□□□ -0.77
CIRBP-240ENST00000592815 SERTAD4-AS1Q5TG53 156 aa10.24□□□□□ -0.77
CIRBP-240ENST00000592815 BORCS7Q96B45 105 aa10.24□□□□□ -0.77
CIRBP-240ENST00000592815 EIF5A2Q9GZV4 153 aaKnown RBP10.24□□□□□ -0.77
CIRBP-240ENST00000592815 PKHD1L1Q86WI1 4243 aa10.24□□□□□ -0.77
CIRBP-240ENST00000592815 A0A087WYN8 130 aa10.23□□□□□ -0.77
CIRBP-240ENST00000592815 FAM231BA6NCW3 169 aa10.23□□□□□ -0.77
CIRBP-240ENST00000592815 GAS8-AS1O95177 125 aa10.23□□□□□ -0.77
CIRBP-240ENST00000592815 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
CIRBP-240ENST00000592815 SMIM7Q9BQ49 75 aa10.23□□□□□ -0.77
CIRBP-240ENST00000592815 TRBV6-5A0A0K0K1A5 114 aa10.22□□□□□ -0.77
CIRBP-240ENST00000592815 RPS10P46783 165 aaKnown RBP10.22□□□□□ -0.77
CIRBP-240ENST00000592815 TSKUQ8WUA8 353 aa10.22□□□□□ -0.77
CIRBP-240ENST00000592815 RNF185Q96GF1 192 aa10.22□□□□□ -0.77
CIRBP-240ENST00000592815 ST20Q9HBF5 79 aa10.22□□□□□ -0.77
CIRBP-240ENST00000592815 A0A1B0GUT8 65 aa10.21□□□□□ -0.77
CIRBP-240ENST00000592815 HIGD1CA8MV81 97 aa10.21□□□□□ -0.77
CIRBP-240ENST00000592815 COX6A2Q02221 97 aa10.21□□□□□ -0.77
CIRBP-240ENST00000592815 LINC01551Q86U37 167 aa10.21□□□□□ -0.77
CIRBP-240ENST00000592815 SPACA4Q8TDM5 124 aa10.21□□□□□ -0.77
CIRBP-240ENST00000592815 TMEM101Q96IK0 257 aa10.21□□□□□ -0.77
CIRBP-240ENST00000592815 BTF3L4Q96K17 158 aa10.21□□□□□ -0.77
CIRBP-240ENST00000592815 ZNF727A8MUV8 499 aa10.2□□□□□ -0.78
CIRBP-240ENST00000592815 TSHBP01222 138 aa10.2□□□□□ -0.78
CIRBP-240ENST00000592815 ZNF25P17030 456 aaPredicted RBP10.2□□□□□ -0.78
CIRBP-240ENST00000592815 OR5A1Q8NGJ0 315 aa10.2□□□□□ -0.78
CIRBP-240ENST00000592815 TMEM191AQ9H0A3 160 aa10.2□□□□□ -0.78
CIRBP-240ENST00000592815 TMEM242Q9NWH2 141 aa10.2□□□□□ -0.78
CIRBP-240ENST00000592815 ESDP10768 282 aa10.19□□□□□ -0.78
CIRBP-240ENST00000592815 RAB4AP20338 218 aa10.19□□□□□ -0.78
CIRBP-240ENST00000592815 XCL1P47992 114 aa10.19□□□□□ -0.78
CIRBP-240ENST00000592815 FOXI1Q12951 378 aa10.19□□□□□ -0.78
CIRBP-240ENST00000592815 PRSS3P2Q8NHM4 247 aa10.19□□□□□ -0.78
CIRBP-240ENST00000592815 FAM210AQ96ND0 272 aa10.19□□□□□ -0.78
CIRBP-240ENST00000592815 OSTCQ9NRP0 149 aa10.19□□□□□ -0.78
CIRBP-240ENST00000592815 PLAC8Q9NZF1 115 aa10.19□□□□□ -0.78
CIRBP-240ENST00000592815 GVQW2A0A096LPI5 108 aaPredicted RBP10.18□□□□□ -0.78
CIRBP-240ENST00000592815 LINC00959A0A1B0GUT2 108 aa10.18□□□□□ -0.78
CIRBP-240ENST00000592815 NDUFS6O75380 124 aaKnown RBP10.18□□□□□ -0.78
CIRBP-240ENST00000592815 SRP19P09132 144 aaKnown RBP10.18□□□□□ -0.78
CIRBP-240ENST00000592815 POLR2KP53803 58 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms