RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 CTRLP40313 264 aa12.12□□□□□ -0.47
CCDC43-205ENST00000592333 CLPSL2Q6UWE3 100 aa12.12□□□□□ -0.47
CCDC43-205ENST00000592333 TRBV20OR9-2A0A075B6H5 130 aa12.11□□□□□ -0.47
CCDC43-205ENST00000592333 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.11□□□□□ -0.47
CCDC43-205ENST00000592333 UBE2L6O14933 153 aa12.11□□□□□ -0.47
CCDC43-205ENST00000592333 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
CCDC43-205ENST00000592333 COTL1Q14019 142 aa12.11□□□□□ -0.47
CCDC43-205ENST00000592333 RNF185Q96GF1 192 aa12.11□□□□□ -0.47
CCDC43-205ENST00000592333 AP5S1Q9NUS5 200 aa12.11□□□□□ -0.47
CCDC43-205ENST00000592333 LRP1Q07954 4544 aaKnown RBP12.1□□□□□ -0.47
CCDC43-205ENST00000592333 IGLV4-60A0A075B6I1 120 aa12.09□□□□□ -0.47
CCDC43-205ENST00000592333 IGLV10-54A0A075B6I4 117 aa12.09□□□□□ -0.47
CCDC43-205ENST00000592333 hDV102S1A0JD36 115 aa12.09□□□□□ -0.47
CCDC43-205ENST00000592333 SLC51BQ86UW2 128 aa12.09□□□□□ -0.47
CCDC43-205ENST00000592333 NUDT10Q8NFP7 164 aa12.09□□□□□ -0.47
CCDC43-205ENST00000592333 NUDT11Q96G61 164 aa12.09□□□□□ -0.47
CCDC43-205ENST00000592333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.09□□□□□ -0.47
CCDC43-205ENST00000592333 IGHV3-64A0A075B6Q5 118 aa12.08□□□□□ -0.48
CCDC43-205ENST00000592333 AMTP48728 403 aa12.08□□□□□ -0.48
CCDC43-205ENST00000592333 CFAP161Q6P656 301 aa12.08□□□□□ -0.48
CCDC43-205ENST00000592333 TEX261Q6UWH6 196 aa12.08□□□□□ -0.48
CCDC43-205ENST00000592333 TCTE3Q8IZS6 198 aa12.08□□□□□ -0.48
CCDC43-205ENST00000592333 H7C423 109 aa12.07□□□□□ -0.48
CCDC43-205ENST00000592333 NCR2O95944 276 aa12.07□□□□□ -0.48
CCDC43-205ENST00000592333 TWIST1Q15672 202 aa12.07□□□□□ -0.48
CCDC43-205ENST00000592333 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
CCDC43-205ENST00000592333 RPP21Q9H633 154 aaKnown RBP12.07□□□□□ -0.48
CCDC43-205ENST00000592333 Q6ZRU5 148 aa12.05□□□□□ -0.48
CCDC43-205ENST00000592333 SMIM15Q7Z3B0 74 aa12.05□□□□□ -0.48
CCDC43-205ENST00000592333 GFRA4Q9GZZ7 299 aa12.05□□□□□ -0.48
CCDC43-205ENST00000592333 PANO1I0J062 215 aa12.04□□□□□ -0.48
CCDC43-205ENST00000592333 GATD1Q8NB37 220 aa12.04□□□□□ -0.48
CCDC43-205ENST00000592333 FAT3Q8TDW7 4589 aa12.04□□□□□ -0.48
CCDC43-205ENST00000592333 OCC1Q8TAD7 63 aa12.03□□□□□ -0.48
CCDC43-205ENST00000592333 TMEM250H0YL14 139 aa12.02□□□□□ -0.49
CCDC43-205ENST00000592333 SLPIP03973 132 aa12.02□□□□□ -0.49
CCDC43-205ENST00000592333 RNASE7Q9H1E1 156 aaKnown RBP12.02□□□□□ -0.49
CCDC43-205ENST00000592333 K7EN84 100 aa12.01□□□□□ -0.49
CCDC43-205ENST00000592333 FAM231DQ6ZW35 169 aa12.01□□□□□ -0.49
CCDC43-205ENST00000592333 SPACA4Q8TDM5 124 aa12.01□□□□□ -0.49
CCDC43-205ENST00000592333 DPH3Q96FX2 82 aa12.01□□□□□ -0.49
CCDC43-205ENST00000592333 HMCN2Q8NDA2 5059 aa12□□□□□ -0.49
CCDC43-205ENST00000592333 ZNF25P17030 456 aaPredicted RBP12□□□□□ -0.49
CCDC43-205ENST00000592333 HNRNPA3P51991 378 aaKnown RBP12□□□□□ -0.49
CCDC43-205ENST00000592333 FOXA3P55318 350 aaPredicted RBP12□□□□□ -0.49
CCDC43-205ENST00000592333 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
CCDC43-205ENST00000592333 C15orf56Q8N910 161 aa12□□□□□ -0.49
CCDC43-205ENST00000592333 A0A087WYN8 130 aa11.99□□□□□ -0.49
CCDC43-205ENST00000592333 GAGE12HA6NDE8 117 aa11.99□□□□□ -0.49
CCDC43-205ENST00000592333 A8MWL6 223 aa11.99□□□□□ -0.49
CCDC43-205ENST00000592333 APCSP02743 223 aa11.99□□□□□ -0.49
CCDC43-205ENST00000592333 RPS10P46783 165 aaKnown RBP11.99□□□□□ -0.49
CCDC43-205ENST00000592333 CT83Q5H943 113 aa11.99□□□□□ -0.49
CCDC43-205ENST00000592333 GTSF1Q8WW33 167 aa11.99□□□□□ -0.49
CCDC43-205ENST00000592333 PLAC8Q9NZF1 115 aa11.99□□□□□ -0.49
CCDC43-205ENST00000592333 TRBV6-5A0A0K0K1A5 114 aa11.98□□□□□ -0.49
CCDC43-205ENST00000592333 NDUFS6O75380 124 aaKnown RBP11.98□□□□□ -0.49
CCDC43-205ENST00000592333 BLOC1S1P78537 153 aa11.98□□□□□ -0.49
CCDC43-205ENST00000592333 PLA2G2DQ9UNK4 145 aa11.98□□□□□ -0.49
CCDC43-205ENST00000592333 TRAV26-2A0A0B4J265 109 aa11.97□□□□□ -0.49
CCDC43-205ENST00000592333 SDHAF1A6NFY7 115 aa11.97□□□□□ -0.49
CCDC43-205ENST00000592333 Q6ZNX1 250 aa11.97□□□□□ -0.49
CCDC43-205ENST00000592333 CHCHD10Q8WYQ3 142 aaPredicted RBP11.97□□□□□ -0.49
CCDC43-205ENST00000592333 PKIGQ9Y2B9 76 aa11.97□□□□□ -0.49
CCDC43-205ENST00000592333 PKHD1L1Q86WI1 4243 aa11.97□□□□□ -0.49
CCDC43-205ENST00000592333 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.49
CCDC43-205ENST00000592333 I3L3M4 83 aa11.96□□□□□ -0.49
CCDC43-205ENST00000592333 GATCO43716 136 aaKnown RBP11.96□□□□□ -0.49
CCDC43-205ENST00000592333 FGF6P10767 208 aa11.96□□□□□ -0.49
CCDC43-205ENST00000592333 LYPD6BQ8NI32 183 aa11.96□□□□□ -0.49
CCDC43-205ENST00000592333 C7orf33Q8WU49 177 aa11.96□□□□□ -0.49
CCDC43-205ENST00000592333 RNASEKQ6P5S7 137 aaKnown RBP11.95□□□□□ -0.5
CCDC43-205ENST00000592333 OR5A1Q8NGJ0 315 aa11.95□□□□□ -0.5
CCDC43-205ENST00000592333 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
CCDC43-205ENST00000592333 BTF3L4Q96K17 158 aa11.95□□□□□ -0.5
CCDC43-205ENST00000592333 FAM231BA6NCW3 169 aa11.94□□□□□ -0.5
CCDC43-205ENST00000592333 BORCS7Q96B45 105 aa11.94□□□□□ -0.5
CCDC43-205ENST00000592333 TMEM101Q96IK0 257 aa11.94□□□□□ -0.5
CCDC43-205ENST00000592333 LINC00474Q9P2X8 69 aa11.94□□□□□ -0.5
CCDC43-205ENST00000592333 CHTF8P0CG12 524 aa11.93□□□□□ -0.5
CCDC43-205ENST00000592333 PMCHP20382 165 aa11.93□□□□□ -0.5
CCDC43-205ENST00000592333 COX6A2Q02221 97 aa11.93□□□□□ -0.5
CCDC43-205ENST00000592333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
CCDC43-205ENST00000592333 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
CCDC43-205ENST00000592333 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
CCDC43-205ENST00000592333 MT1HL1P0DM35 61 aa11.92□□□□□ -0.5
CCDC43-205ENST00000592333 ESDP10768 282 aa11.92□□□□□ -0.5
CCDC43-205ENST00000592333 FOXI1Q12951 378 aa11.91□□□□□ -0.5
CCDC43-205ENST00000592333 TMEM191AQ9H0A3 160 aa11.91□□□□□ -0.5
CCDC43-205ENST00000592333 ST20Q9HBF5 79 aa11.91□□□□□ -0.5
CCDC43-205ENST00000592333 A0A1B0GUT8 65 aa11.9□□□□□ -0.5
CCDC43-205ENST00000592333 HIGD2BQ4VC39 106 aa11.9□□□□□ -0.5
CCDC43-205ENST00000592333 MRPL52Q86TS9 123 aaKnown RBP11.9□□□□□ -0.5
CCDC43-205ENST00000592333 TSKUQ8WUA8 353 aa11.9□□□□□ -0.5
CCDC43-205ENST00000592333 MRAP2Q96G30 205 aa11.9□□□□□ -0.5
CCDC43-205ENST00000592333 IGHV1-58A0A0C4DH39 117 aa11.89□□□□□ -0.51
CCDC43-205ENST00000592333 TRBV27A0A0K0K1C4 114 aa11.89□□□□□ -0.51
CCDC43-205ENST00000592333 LINC00959A0A1B0GUT2 108 aa11.89□□□□□ -0.51
CCDC43-205ENST00000592333 PHOX2AO14813 284 aa11.89□□□□□ -0.51
CCDC43-205ENST00000592333 POLR2KP53803 58 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 306.5 ms