RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 CRIP2P52943 208 aaPredicted RBP4.43□□□□□ -1.7
NPC1-213ENST00000591955 POLR2KP53803 58 aaKnown RBP4.43□□□□□ -1.7
NPC1-213ENST00000591955 C2orf48Q96LS8 159 aa4.43□□□□□ -1.7
NPC1-213ENST00000591955 C17orf77Q96MU5 243 aa4.43□□□□□ -1.7
NPC1-213ENST00000591955 POLQO75417 2590 aa4.43□□□□□ -1.7
NPC1-213ENST00000591955 LRBAP50851 2863 aa4.43□□□□□ -1.7
NPC1-213ENST00000591955 SDK2Q58EX2 2172 aa4.43□□□□□ -1.7
NPC1-213ENST00000591955 MED13Q9UHV7 2174 aa4.43□□□□□ -1.7
NPC1-213ENST00000591955 DSCAML1Q8TD84 2053 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 TRBV7-1A0A0A6YYK4 115 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 TRAV26-2A0A0B4J265 109 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 BUB1B-PAK6H3BSN5 160 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 IGHG2P01859 326 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 TFF1P04155 84 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 GNLYP22749 145 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 RNASE4P34096 147 aaKnown RBP4.42□□□□□ -1.7
NPC1-213ENST00000591955 SYNJ2BPP57105 145 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 GFRALQ6UXV0 394 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 CNEP1R1Q8N9A8 125 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 LY6G5BQ8NDX9 201 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 KLHL30-AS1Q8NEE0 82 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 Q8TAT8 98 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 KLK15Q9H2R5 256 aa4.42□□□□□ -1.7
NPC1-213ENST00000591955 FBN3Q75N90 2809 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 IGHV1-58A0A0C4DH39 117 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 LOC107984640A0A0U1RRK4 108 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 BUB3O43684 328 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 UBE2E1P51965 193 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 APRG1Q8IVJ8 170 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 DYNAPQ8N1N2 210 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 JPT2Q9H910 190 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 SPRR3Q9UBC9 169 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 OTOGQ6ZRI0 2925 aa4.41□□□□□ -1.7
NPC1-213ENST00000591955 FREM1Q5H8C1 2179 aa4.4□□□□□ -1.7
NPC1-213ENST00000591955 SETD2Q9BYW2 2564 aaPredicted RBP4.4□□□□□ -1.7
NPC1-213ENST00000591955 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 TRAV8-3A0A0A6YYJ7 113 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 TRAV13-2A0A0B4J235 113 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 TINCRA0A1B0GVN0 87 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 MBD3L4A6NDZ8 208 aaPredicted RBP4.4□□□□□ -1.71
NPC1-213ENST00000591955 MBD3L3A6NE82 208 aaPredicted RBP4.4□□□□□ -1.71
NPC1-213ENST00000591955 MBD3L5A6NJ08 208 aaPredicted RBP4.4□□□□□ -1.71
NPC1-213ENST00000591955 LINC01548A6NM66 108 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 H0YGX0 51 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 TMEM178BH3BS89 294 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 H7C2G1 150 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 I3L3M4 83 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 GAS8-AS1O95177 125 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 MGPP08493 103 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 LOXP28300 417 aaPredicted RBP4.4□□□□□ -1.71
NPC1-213ENST00000591955 TSPEAR-AS2P59090 65 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 ATP1A1-AS1Q5TC04 95 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 GPHB5Q86YW7 130 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 MBD3L2Q8NHZ7 208 aaPredicted RBP4.4□□□□□ -1.71
NPC1-213ENST00000591955 BEX4Q9NWD9 120 aaPredicted RBP4.4□□□□□ -1.71
NPC1-213ENST00000591955 NDUFA12Q9UI09 145 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 DNHD1Q96M86 4753 aa4.4□□□□□ -1.71
NPC1-213ENST00000591955 CENPEQ02224 2701 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 ZFHX3Q15911 3703 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 NF1P21359 2839 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 IGHV3-21A0A0B4J1V1 117 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 FAM236DA0A1B0GTK5 79 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 EPM2AB3EWF7 344 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 M0R1B8 84 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 ZNHIT1O43257 154 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 TSHBP01222 138 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 PRSS2P07478 247 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 IGHV3-30-3P0DP02 117 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 FAM236CP0DP71 79 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 CCL4P13236 92 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 CCL3L1P16619 93 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
NPC1-213ENST00000591955 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 C20orf203Q8NBC4 194 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 DEFB108BQ8NET1 73 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 FAM110DQ8TAY7 271 aaPredicted RBP4.39□□□□□ -1.71
NPC1-213ENST00000591955 C9orf85Q96MD7 179 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 LITAFQ99732 161 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 UPK3BQ9BT76 320 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 DPM3Q9P2X0 92 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 V9GYY9 64 aa4.39□□□□□ -1.71
NPC1-213ENST00000591955 A0A1W2PRX2 142 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 RBMY1BA6NDE4 496 aaKnown RBP4.38□□□□□ -1.71
NPC1-213ENST00000591955 RBMY1EA6NEQ0 496 aaKnown RBP4.38□□□□□ -1.71
NPC1-213ENST00000591955 KNCNA6PVL3 124 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 H3BQ85 93 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 NDUFA1O15239 70 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 RS1O15537 224 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 CTSGP08311 255 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 RBMY1DP0C7P1 496 aaKnown RBP4.38□□□□□ -1.71
NPC1-213ENST00000591955 BAALC-AS2P0C853 105 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 RBMY1A1P0DJD3 496 aaKnown RBP4.38□□□□□ -1.71
NPC1-213ENST00000591955 RBMY1CP0DJD4 496 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 PFN2P35080 140 aa4.38□□□□□ -1.71
NPC1-213ENST00000591955 DAZ2Q13117 558 aaKnown RBP4.38□□□□□ -1.71
NPC1-213ENST00000591955 RBMY1FQ15415 496 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms