RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SDHAF1A6NFY7 115 aa6.72□□□□□ -1.33
BRCA1-227ENST00000591849 LECT2O14960 151 aa6.72□□□□□ -1.33
BRCA1-227ENST00000591849 PPP1R17O96001 155 aa6.72□□□□□ -1.33
BRCA1-227ENST00000591849 APCSP02743 223 aa6.72□□□□□ -1.33
BRCA1-227ENST00000591849 MT-ND4LP03901 98 aa6.72□□□□□ -1.33
BRCA1-227ENST00000591849 RAB4AP20338 218 aa6.72□□□□□ -1.33
BRCA1-227ENST00000591849 PNRC1Q12796 327 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-227ENST00000591849 MRPL54Q6P161 138 aaKnown RBP6.72□□□□□ -1.33
BRCA1-227ENST00000591849 AMN1Q8IY45 258 aa6.72□□□□□ -1.33
BRCA1-227ENST00000591849 BAALCQ8WXS3 180 aa6.72□□□□□ -1.33
BRCA1-227ENST00000591849 MRAP2Q96G30 205 aa6.72□□□□□ -1.33
BRCA1-227ENST00000591849 F8W036 122 aa6.71□□□□□ -1.34
BRCA1-227ENST00000591849 I3L3M4 83 aa6.71□□□□□ -1.34
BRCA1-227ENST00000591849 NCR2O95944 276 aa6.71□□□□□ -1.34
BRCA1-227ENST00000591849 CLPSL2Q6UWE3 100 aa6.71□□□□□ -1.34
BRCA1-227ENST00000591849 LINC00269Q8N2A0 174 aa6.71□□□□□ -1.34
BRCA1-227ENST00000591849 LRCOL1A6NCL2 159 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 SMKR1H3BMG3 65 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 GCSHP23434 173 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 HBBP68871 147 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 MIAQ16674 131 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 RNASEKQ6P5S7 137 aaKnown RBP6.7□□□□□ -1.34
BRCA1-227ENST00000591849 UQCC3Q6UW78 93 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 ENHOQ6UWT2 76 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 Q8N814 137 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 NTN5Q8WTR8 489 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-227ENST00000591849 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 RNF185Q96GF1 192 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 DNAH11Q96DT5 4516 aa6.7□□□□□ -1.34
BRCA1-227ENST00000591849 ABCA13Q86UQ4 5058 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 PKD1P98161 4303 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 IGKV3OR2-268A0A0C4DH90 116 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 TRBV6-5A0A0K0K1A5 114 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 LINC00862A6NCI5 91 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 VCYO14598 125 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 FCER1GP30273 86 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 CKS2P33552 79 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 REG3AQ06141 175 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 FAM104BQ5XKR9 115 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 TMEM101Q96IK0 257 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 BTF3L4Q96K17 158 aa6.69□□□□□ -1.34
BRCA1-227ENST00000591849 DYNC1H1Q14204 4646 aaKnown RBP6.69□□□□□ -1.34
BRCA1-227ENST00000591849 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-227ENST00000591849 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-227ENST00000591849 A0A1B0GUV1 79 aa6.68□□□□□ -1.34
BRCA1-227ENST00000591849 IGKV2-29A2NJV5 120 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-227ENST00000591849 H7C423 109 aa6.68□□□□□ -1.34
BRCA1-227ENST00000591849 GAS8-AS1O95177 125 aa6.68□□□□□ -1.34
BRCA1-227ENST00000591849 HLA-DQA1P01909 254 aa6.68□□□□□ -1.34
BRCA1-227ENST00000591849 MRPL51Q4U2R6 128 aaKnown RBP6.68□□□□□ -1.34
BRCA1-227ENST00000591849 C14orf177Q52M58 125 aa6.68□□□□□ -1.34
BRCA1-227ENST00000591849 KIR2DL4Q99706 377 aa6.68□□□□□ -1.34
BRCA1-227ENST00000591849 TMEM70Q9BUB7 260 aa6.68□□□□□ -1.34
BRCA1-227ENST00000591849 TMEM242Q9NWH2 141 aa6.68□□□□□ -1.34
BRCA1-227ENST00000591849 IGLV4-60A0A075B6I1 120 aa6.67□□□□□ -1.34
BRCA1-227ENST00000591849 IGLV10-54A0A075B6I4 117 aa6.67□□□□□ -1.34
BRCA1-227ENST00000591849 TMEM218A2RU14 115 aa6.67□□□□□ -1.34
BRCA1-227ENST00000591849 CDK2AP2O75956 126 aa6.67□□□□□ -1.34
BRCA1-227ENST00000591849 RPS10P46783 165 aaKnown RBP6.67□□□□□ -1.34
BRCA1-227ENST00000591849 DGAT2L7PQ6IED9 249 aa6.67□□□□□ -1.34
BRCA1-227ENST00000591849 COMMD7Q86VX2 200 aa6.67□□□□□ -1.34
BRCA1-227ENST00000591849 MAPKAPK5-AS1Q8N8E1 139 aa6.67□□□□□ -1.34
BRCA1-227ENST00000591849 C20orf203Q8NBC4 194 aa6.67□□□□□ -1.34
BRCA1-227ENST00000591849 TRAV8-4A0A0B4J246 113 aa6.66□□□□□ -1.34
BRCA1-227ENST00000591849 FGF6P10767 208 aa6.66□□□□□ -1.34
BRCA1-227ENST00000591849 POLR2KP53803 58 aaKnown RBP6.66□□□□□ -1.34
BRCA1-227ENST00000591849 SUMO2P61956 95 aaKnown RBP6.66□□□□□ -1.34
BRCA1-227ENST00000591849 SMAGPQ0VAQ4 97 aa6.66□□□□□ -1.34
BRCA1-227ENST00000591849 WFDC2Q14508 124 aa6.66□□□□□ -1.34
BRCA1-227ENST00000591849 ATP5L2Q7Z4Y8 100 aa6.66□□□□□ -1.34
BRCA1-227ENST00000591849 PRR34Q9NV39 138 aa6.66□□□□□ -1.34
BRCA1-227ENST00000591849 TRBV27A0A0K0K1C4 114 aa6.65□□□□□ -1.34
BRCA1-227ENST00000591849 D6R8Y8 96 aa6.65□□□□□ -1.34
BRCA1-227ENST00000591849 TSHBP01222 138 aa6.65□□□□□ -1.34
BRCA1-227ENST00000591849 PPBPP02775 128 aa6.65□□□□□ -1.34
BRCA1-227ENST00000591849 KRTAP10-1P60331 282 aa6.65□□□□□ -1.34
BRCA1-227ENST00000591849 OR5A1Q8NGJ0 315 aa6.65□□□□□ -1.34
BRCA1-227ENST00000591849 TMEM18Q96B42 140 aa6.65□□□□□ -1.34
BRCA1-227ENST00000591849 C20orf78Q9BR46 151 aa6.65□□□□□ -1.34
BRCA1-227ENST00000591849 A0A1B0GXF2 115 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 C7orf77A4D0Y5 90 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 USP17L23D6RBM5 183 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 TCAPO15273 167 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 TNFRSF6BO95407 300 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 ZNF25P17030 456 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-227ENST00000591849 S100A1P23297 94 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 TMEM136Q6ZRR5 245 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 NRACQ8N912 160 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 CTDSP1Q9GZU7 261 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 HSPG2P98160 4391 aa6.64□□□□□ -1.35
BRCA1-227ENST00000591849 GAGE12HA6NDE8 117 aa6.63□□□□□ -1.35
BRCA1-227ENST00000591849 ESDP10768 282 aa6.63□□□□□ -1.35
BRCA1-227ENST00000591849 RAB5AP20339 215 aa6.63□□□□□ -1.35
BRCA1-227ENST00000591849 S100PP25815 95 aa6.63□□□□□ -1.35
BRCA1-227ENST00000591849 ORMDL3Q8N138 153 aa6.63□□□□□ -1.35
BRCA1-227ENST00000591849 PRELID3AQ96N28 172 aa6.63□□□□□ -1.35
BRCA1-227ENST00000591849 SEC11CQ9BY50 192 aa6.63□□□□□ -1.35
BRCA1-227ENST00000591849 PHOX2AO14813 284 aa6.62□□□□□ -1.35
BRCA1-227ENST00000591849 ATP6V1G1O75348 118 aa6.62□□□□□ -1.35
BRCA1-227ENST00000591849 SS18Q15532 418 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 226.1 ms