RNA–Protein interactions for RNA: ENST00000591357.5

JRK-208, Transcript of Jrk helix-turn-helix protein, human

TSL 4

Gene JRK, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
JRK-208	ENST00000591357	INAFM2	P0DMQ5	153 aa		13.82	□□□□□ -0.2
JRK-208	ENST00000591357	CT83	Q5H943	113 aa		13.82	□□□□□ -0.2
JRK-208	ENST00000591357	TMEM243	Q9BU79	118 aa		13.82	□□□□□ -0.2
JRK-208	ENST00000591357	ZNF727	A8MUV8	499 aa		13.81	□□□□□ -0.2
JRK-208	ENST00000591357	RPL39L	Q96EH5	51 aa	Known RBP	13.81	□□□□□ -0.2
JRK-208	ENST00000591357	GFRA4	Q9GZZ7	299 aa		13.81	□□□□□ -0.2
JRK-208	ENST00000591357	FAM229A	H3BQW9	127 aa		13.8	□□□□□ -0.2
JRK-208	ENST00000591357		C9JQL5	133 aa		13.79	□□□□□ -0.2
JRK-208	ENST00000591357	USP17L23	D6RBM5	183 aa		13.79	□□□□□ -0.2
JRK-208	ENST00000591357	COTL1	Q14019	142 aa		13.79	□□□□□ -0.2
JRK-208	ENST00000591357	OSTC	Q9NRP0	149 aa		13.79	□□□□□ -0.2
JRK-208	ENST00000591357	REG3A	Q06141	175 aa		13.78	□□□□□ -0.2
JRK-208	ENST00000591357	SMIM15	Q7Z3B0	74 aa		13.78	□□□□□ -0.2
JRK-208	ENST00000591357	TSKU	Q8WUA8	353 aa		13.78	□□□□□ -0.2
JRK-208	ENST00000591357	GAS8-AS1	O95177	125 aa		13.77	□□□□□ -0.21
JRK-208	ENST00000591357	HLA-DQA1	P01909	254 aa		13.77	□□□□□ -0.21
JRK-208	ENST00000591357	PRSS1	P07477	247 aa		13.77	□□□□□ -0.21
JRK-208	ENST00000591357	AMT	P48728	403 aa		13.77	□□□□□ -0.21
JRK-208	ENST00000591357	C14orf177	Q52M58	125 aa		13.77	□□□□□ -0.21
JRK-208	ENST00000591357	SRRM2	Q9UQ35	2752 aa	Known RBP	13.77	□□□□□ -0.21
JRK-208	ENST00000591357		V9GYV3	84 aa		13.76	□□□□□ -0.21
JRK-208	ENST00000591357	IGLV10-54	A0A075B6I4	117 aa		13.75	□□□□□ -0.21
JRK-208	ENST00000591357	HIGD1C	A8MV81	97 aa		13.75	□□□□□ -0.21
JRK-208	ENST00000591357	SRSF3	P84103	164 aa	Known RBP	13.75	□□□□□ -0.21
JRK-208	ENST00000591357		A0A1B0GUT8	65 aa		13.74	□□□□□ -0.21
JRK-208	ENST00000591357	FAM231B	A6NCW3	169 aa		13.74	□□□□□ -0.21
JRK-208	ENST00000591357	TMEM241	Q24JQ0	296 aa		13.74	□□□□□ -0.21
JRK-208	ENST00000591357	TEX261	Q6UWH6	196 aa		13.74	□□□□□ -0.21
JRK-208	ENST00000591357	RNF185	Q96GF1	192 aa		13.74	□□□□□ -0.21
JRK-208	ENST00000591357	TRAV8-4	A0A0B4J246	113 aa		13.73	□□□□□ -0.21
JRK-208	ENST00000591357	RPL23	P62829	140 aa	Known RBP	13.73	□□□□□ -0.21
JRK-208	ENST00000591357	ISOC2	Q96AB3	205 aa		13.73	□□□□□ -0.21
JRK-208	ENST00000591357	TMEM191A	Q9H0A3	160 aa		13.73	□□□□□ -0.21
JRK-208	ENST00000591357	TRBV6-5	A0A0K0K1A5	114 aa		13.72	□□□□□ -0.21
JRK-208	ENST00000591357	SDHAF1	A6NFY7	115 aa		13.72	□□□□□ -0.21
JRK-208	ENST00000591357	UBE2L6	O14933	153 aa		13.72	□□□□□ -0.21
JRK-208	ENST00000591357	NCR2	O95944	276 aa		13.72	□□□□□ -0.21
JRK-208	ENST00000591357	RAB4A	P20338	218 aa		13.72	□□□□□ -0.21
JRK-208	ENST00000591357	FAM74A3	Q4VXF1	159 aa		13.72	□□□□□ -0.21
JRK-208	ENST00000591357	SCX	Q7RTU7	201 aa		13.72	□□□□□ -0.21
JRK-208	ENST00000591357	CHAC1	Q9BUX1	264 aa		13.72	□□□□□ -0.21
JRK-208	ENST00000591357	DGAT2L7P	Q6IED9	249 aa		13.71	□□□□□ -0.21
JRK-208	ENST00000591357	NUP35	Q8NFH5	326 aa		13.71	□□□□□ -0.21
JRK-208	ENST00000591357	CIRBP-AS1	Q8TBR5	109 aa		13.71	□□□□□ -0.21
JRK-208	ENST00000591357	BORCS7	Q96B45	105 aa		13.71	□□□□□ -0.21
JRK-208	ENST00000591357	MYCBP2	O75592	4640 aa		13.71	□□□□□ -0.21
JRK-208	ENST00000591357	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.7	□□□□□ -0.22
JRK-208	ENST00000591357	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.7	□□□□□ -0.22
JRK-208	ENST00000591357	C9orf163	Q8N9P6	203 aa		13.7	□□□□□ -0.22
JRK-208	ENST00000591357	HERC1	Q15751	4861 aa		13.69	□□□□□ -0.22
JRK-208	ENST00000591357	PMCH	P20382	165 aa		13.69	□□□□□ -0.22
JRK-208	ENST00000591357		I3L3M4	83 aa		13.68	□□□□□ -0.22
JRK-208	ENST00000591357	RPS10	P46783	165 aa	Known RBP	13.68	□□□□□ -0.22
JRK-208	ENST00000591357	POLR2K	P53803	58 aa	Known RBP	13.68	□□□□□ -0.22
JRK-208	ENST00000591357	PEA15	Q15121	130 aa		13.68	□□□□□ -0.22
JRK-208	ENST00000591357	AMN1	Q8IY45	258 aa		13.68	□□□□□ -0.22
JRK-208	ENST00000591357	LINC00528	Q8N1L1	170 aa		13.68	□□□□□ -0.22
JRK-208	ENST00000591357	FLG2	Q5D862	2391 aa	Predicted RBP	13.67	□□□□□ -0.22
JRK-208	ENST00000591357		H7C423	109 aa		13.67	□□□□□ -0.22
JRK-208	ENST00000591357	APCS	P02743	223 aa		13.67	□□□□□ -0.22
JRK-208	ENST00000591357	ESD	P10768	282 aa		13.67	□□□□□ -0.22
JRK-208	ENST00000591357	CLRN3	Q8NCR9	226 aa		13.67	□□□□□ -0.22
JRK-208	ENST00000591357	NAT8	Q9UHE5	227 aa		13.67	□□□□□ -0.22
JRK-208	ENST00000591357	TSHB	P01222	138 aa		13.66	□□□□□ -0.22
JRK-208	ENST00000591357	SLPI	P03973	132 aa		13.66	□□□□□ -0.22
JRK-208	ENST00000591357	RIG	Q13278	110 aa		13.66	□□□□□ -0.22
JRK-208	ENST00000591357	ST20	Q9HBF5	79 aa		13.66	□□□□□ -0.22
JRK-208	ENST00000591357	FGF6	P10767	208 aa		13.65	□□□□□ -0.22
JRK-208	ENST00000591357	ADIRF	Q15847	76 aa		13.65	□□□□□ -0.22
JRK-208	ENST00000591357	SDIM1	Q6ZPB5	146 aa		13.65	□□□□□ -0.22
JRK-208	ENST00000591357	MRAP2	Q96G30	205 aa		13.65	□□□□□ -0.22
JRK-208	ENST00000591357	SMDT1	Q9H4I9	107 aa		13.65	□□□□□ -0.22
JRK-208	ENST00000591357	SMIM27	A0A1W2PRY6	76 aa		13.64	□□□□□ -0.23
JRK-208	ENST00000591357	GAGE12H	A6NDE8	117 aa		13.64	□□□□□ -0.23
JRK-208	ENST00000591357	SMKR1	H3BMG3	65 aa		13.64	□□□□□ -0.23
JRK-208	ENST00000591357	AMMECR1L	Q6DCA0	310 aa		13.64	□□□□□ -0.23
JRK-208	ENST00000591357	RNASEK	Q6P5S7	137 aa	Known RBP	13.64	□□□□□ -0.23
JRK-208	ENST00000591357	NAT8B	Q9UHF3	227 aa		13.64	□□□□□ -0.23
JRK-208	ENST00000591357	IGKV3OR2-268	A0A0C4DH90	116 aa		13.63	□□□□□ -0.23
JRK-208	ENST00000591357	PLA2G1B	P04054	148 aa	Known RBP	13.63	□□□□□ -0.23
JRK-208	ENST00000591357	KRTAP10-4	P60372	401 aa	Predicted RBP	13.63	□□□□□ -0.23
JRK-208	ENST00000591357	TMEM242	Q9NWH2	141 aa		13.63	□□□□□ -0.23
JRK-208	ENST00000591357	TRBV27	A0A0K0K1C4	114 aa		13.62	□□□□□ -0.23
JRK-208	ENST00000591357	hDV102S1	A0JD36	115 aa		13.62	□□□□□ -0.23
JRK-208	ENST00000591357	PANO1	I0J062	215 aa		13.62	□□□□□ -0.23
JRK-208	ENST00000591357	CNBP	P62633	177 aa	Known RBP	13.62	□□□□□ -0.23
JRK-208	ENST00000591357	C15orf56	Q8N910	161 aa		13.61	□□□□□ -0.23
JRK-208	ENST00000591357	NRAC	Q8N912	160 aa		13.61	□□□□□ -0.23
JRK-208	ENST00000591357	FAM104B	Q5XKR9	115 aa		13.6	□□□□□ -0.23
JRK-208	ENST00000591357	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.6	□□□□□ -0.23
JRK-208	ENST00000591357	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.6	□□□□□ -0.23
JRK-208	ENST00000591357	ZNF25	P17030	456 aa	Predicted RBP	13.59	□□□□□ -0.23
JRK-208	ENST00000591357	OR5A1	Q8NGJ0	315 aa		13.59	□□□□□ -0.23
JRK-208	ENST00000591357	VCY	O14598	125 aa		13.58	□□□□□ -0.24
JRK-208	ENST00000591357	MRPL51	Q4U2R6	128 aa	Known RBP	13.58	□□□□□ -0.24
JRK-208	ENST00000591357	CAMP	P49913	170 aa		13.57	□□□□□ -0.24
JRK-208	ENST00000591357	CDC42SE2	Q9NRR3	84 aa		13.57	□□□□□ -0.24
JRK-208	ENST00000591357	LINC00959	A0A1B0GUT2	108 aa		13.56	□□□□□ -0.24
JRK-208	ENST00000591357	FOXI1	Q12951	378 aa		13.56	□□□□□ -0.24
JRK-208	ENST00000591357	CFAP161	Q6P656	301 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms