RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 LOC100131303A0A0U1RQF7 123 aa11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 TCAPO15273 167 aa11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 LEPROTL1O95214 131 aa11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 Q8N976 141 aa11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 DEFB104AQ8WTQ1 72 aa11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 DNAJC30Q96LL9 226 aa11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 SMIM2Q9BVW6 85 aa11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 Q9UF83 564 aa11.84□□□□□ -0.51
RPRD1A-209ENST00000590898 PRSS47A8MTI9 375 aa11.83□□□□□ -0.52
RPRD1A-209ENST00000590898 SPATA12Q7Z6I5 190 aa11.83□□□□□ -0.52
RPRD1A-209ENST00000590898 LINC01546A6NGU7 62 aa11.82□□□□□ -0.52
RPRD1A-209ENST00000590898 P0DMU3 169 aa11.82□□□□□ -0.52
RPRD1A-209ENST00000590898 FAM231AP0DMU4 169 aa11.82□□□□□ -0.52
RPRD1A-209ENST00000590898 FAM231CP0DMU5 169 aa11.82□□□□□ -0.52
RPRD1A-209ENST00000590898 NEXN-AS1Q8NBZ9 246 aa11.82□□□□□ -0.52
RPRD1A-209ENST00000590898 LINC00694P0DN24 101 aa11.82□□□□□ -0.52
RPRD1A-209ENST00000590898 ZNRF2Q8NHG8 242 aa11.82□□□□□ -0.52
RPRD1A-209ENST00000590898 GAGE12JA6NER3 117 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 HBDP02042 147 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 CCL18P55774 89 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 TIRAPP58753 221 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 GAGE1Q13065 139 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 GAGE4Q13068 117 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 GAGE5Q13069 117 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 LGALS9CQ6DKI2 356 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 C20orf78Q9BR46 151 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 PPP1R17O96001 155 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 UBE2D3P61077 147 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 UBE2D2P62837 147 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 TNFRSF18Q9Y5U5 241 aa11.8□□□□□ -0.52
RPRD1A-209ENST00000590898 VPS13DQ5THJ4 4388 aa11.79□□□□□ -0.52
RPRD1A-209ENST00000590898 PCP4L1A6NKN8 68 aa11.79□□□□□ -0.52
RPRD1A-209ENST00000590898 ESRGQ1W209 222 aa11.79□□□□□ -0.52
RPRD1A-209ENST00000590898 LYPD5Q6UWN5 251 aa11.79□□□□□ -0.52
RPRD1A-209ENST00000590898 TMEM70Q9BUB7 260 aa11.79□□□□□ -0.52
RPRD1A-209ENST00000590898 BTF3P20290 206 aaKnown RBP11.78□□□□□ -0.52
RPRD1A-209ENST00000590898 GTSF1LQ9H1H1 148 aa11.78□□□□□ -0.52
RPRD1A-209ENST00000590898 ST20Q9HBF5 79 aa11.78□□□□□ -0.52
RPRD1A-209ENST00000590898 H0Y8G0 127 aa11.78□□□□□ -0.52
RPRD1A-209ENST00000590898 LAGE3Q14657 143 aa11.78□□□□□ -0.52
RPRD1A-209ENST00000590898 DAZ4Q86SG3 579 aaKnown RBP11.78□□□□□ -0.52
RPRD1A-209ENST00000590898 DAZ3Q9NR90 486 aaKnown RBP11.78□□□□□ -0.52
RPRD1A-209ENST00000590898 TRBV6-5A0A0K0K1A5 114 aa11.77□□□□□ -0.53
RPRD1A-209ENST00000590898 SDHAF1A6NFY7 115 aa11.77□□□□□ -0.53
RPRD1A-209ENST00000590898 POLR2KP53803 58 aaKnown RBP11.77□□□□□ -0.53
RPRD1A-209ENST00000590898 SYS1-DBNDD2H3BUS1 97 aa11.76□□□□□ -0.53
RPRD1A-209ENST00000590898 FCER1GP30273 86 aa11.76□□□□□ -0.53
RPRD1A-209ENST00000590898 HSPB8Q9UJY1 196 aa11.76□□□□□ -0.53
RPRD1A-209ENST00000590898 DNAH1Q9P2D7 4330 aa11.76□□□□□ -0.53
RPRD1A-209ENST00000590898 ATOH7Q8N100 152 aa11.76□□□□□ -0.53
RPRD1A-209ENST00000590898 LINC00588Q9Y4M8 146 aa11.76□□□□□ -0.53
RPRD1A-209ENST00000590898 LINC00476Q8WZB0 136 aa11.75□□□□□ -0.53
RPRD1A-209ENST00000590898 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
RPRD1A-209ENST00000590898 TMEM97Q5BJF2 176 aa11.74□□□□□ -0.53
RPRD1A-209ENST00000590898 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
RPRD1A-209ENST00000590898 MAP1LC3CQ9BXW4 147 aa11.74□□□□□ -0.53
RPRD1A-209ENST00000590898 MRPS16Q9Y3D3 137 aaKnown RBP11.74□□□□□ -0.53
RPRD1A-209ENST00000590898 TEX43Q6ZNM6 134 aa11.74□□□□□ -0.53
RPRD1A-209ENST00000590898 UBE2DNLQ8IWF7 75 aa11.74□□□□□ -0.53
RPRD1A-209ENST00000590898 PMCHL2Q9BQD1 86 aa11.74□□□□□ -0.53
RPRD1A-209ENST00000590898 RPL32P62910 135 aaKnown RBP11.73□□□□□ -0.53
RPRD1A-209ENST00000590898 ZNF664Q8N3J9 261 aa11.73□□□□□ -0.53
RPRD1A-209ENST00000590898 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
RPRD1A-209ENST00000590898 LELP1Q5T871 98 aa11.72□□□□□ -0.53
RPRD1A-209ENST00000590898 PRO1933Q9H354 126 aa11.72□□□□□ -0.53
RPRD1A-209ENST00000590898 VCYO14598 125 aa11.72□□□□□ -0.53
RPRD1A-209ENST00000590898 MAJINQ3KP22 176 aa11.72□□□□□ -0.53
RPRD1A-209ENST00000590898 IFI27L1Q96BM0 104 aa11.72□□□□□ -0.53
RPRD1A-209ENST00000590898 SACSQ9NZJ4 4579 aa11.71□□□□□ -0.53
RPRD1A-209ENST00000590898 LY6G6CO95867 125 aa11.71□□□□□ -0.53
RPRD1A-209ENST00000590898 S100A12P80511 92 aa11.71□□□□□ -0.53
RPRD1A-209ENST00000590898 ORMDL2Q53FV1 153 aa11.71□□□□□ -0.53
RPRD1A-209ENST00000590898 KMT2AQ03164 3969 aa11.71□□□□□ -0.54
RPRD1A-209ENST00000590898 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
RPRD1A-209ENST00000590898 LCE6AA0A183 80 aa11.7□□□□□ -0.54
RPRD1A-209ENST00000590898 TRBV6-8A0A0A6YYG3 113 aa11.7□□□□□ -0.54
RPRD1A-209ENST00000590898 TRAV8-6A0A0B4J262 113 aa11.7□□□□□ -0.54
RPRD1A-209ENST00000590898 TSHBP01222 138 aa11.7□□□□□ -0.54
RPRD1A-209ENST00000590898 KIR2DL4Q99706 377 aa11.7□□□□□ -0.54
RPRD1A-209ENST00000590898 PAM16Q9Y3D7 125 aa11.7□□□□□ -0.54
RPRD1A-209ENST00000590898 I3L3M4 83 aa11.69□□□□□ -0.54
RPRD1A-209ENST00000590898 PET117Q6UWS5 81 aa11.69□□□□□ -0.54
RPRD1A-209ENST00000590898 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
RPRD1A-209ENST00000590898 KMT2CQ8NEZ4 4911 aaKnown RBP11.68□□□□□ -0.54
RPRD1A-209ENST00000590898 K7EMI3 77 aa11.68□□□□□ -0.54
RPRD1A-209ENST00000590898 RPL39P62891 51 aaKnown RBP11.68□□□□□ -0.54
RPRD1A-209ENST00000590898 COTL1Q14019 142 aa11.68□□□□□ -0.54
RPRD1A-209ENST00000590898 LINC01545Q5VT33 79 aa11.68□□□□□ -0.54
RPRD1A-209ENST00000590898 TOMM6Q96B49 74 aa11.68□□□□□ -0.54
RPRD1A-209ENST00000590898 Q9H8V8 135 aa11.68□□□□□ -0.54
RPRD1A-209ENST00000590898 NTM-AS1Q6ZSK4 140 aa11.68□□□□□ -0.54
RPRD1A-209ENST00000590898 VAMP8Q9BV40 100 aa11.68□□□□□ -0.54
RPRD1A-209ENST00000590898 DNAH6Q9C0G6 4158 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms