RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 NTF3P20783 257 aa7.39□□□□□ -1.23
CLIP3-204ENST00000590559 RGS21Q2M5E4 152 aa7.39□□□□□ -1.23
CLIP3-204ENST00000590559 WDR73Q6P4I2 378 aa7.39□□□□□ -1.23
CLIP3-204ENST00000590559 LYZL1Q6UWQ5 148 aa7.39□□□□□ -1.23
CLIP3-204ENST00000590559 C9orf62Q8N4C0 152 aa7.39□□□□□ -1.23
CLIP3-204ENST00000590559 CNFNQ9BYD5 112 aa7.39□□□□□ -1.23
CLIP3-204ENST00000590559 DPH3P1Q9H4G8 78 aa7.39□□□□□ -1.23
CLIP3-204ENST00000590559 AP5S1Q9NUS5 200 aa7.39□□□□□ -1.23
CLIP3-204ENST00000590559 PHOX2AO14813 284 aa7.38□□□□□ -1.23
CLIP3-204ENST00000590559 TRGC1P0CF51 173 aa7.38□□□□□ -1.23
CLIP3-204ENST00000590559 CTRLP40313 264 aa7.38□□□□□ -1.23
CLIP3-204ENST00000590559 RAB5CP51148 216 aa7.38□□□□□ -1.23
CLIP3-204ENST00000590559 TPPP3Q9BW30 176 aa7.38□□□□□ -1.23
CLIP3-204ENST00000590559 GNG13Q9P2W3 67 aa7.38□□□□□ -1.23
CLIP3-204ENST00000590559 KANTRA0A1W2PQU2 76 aa7.37□□□□□ -1.23
CLIP3-204ENST00000590559 COX6A2Q02221 97 aa7.37□□□□□ -1.23
CLIP3-204ENST00000590559 LINC01600Q96MT4 127 aa7.37□□□□□ -1.23
CLIP3-204ENST00000590559 GAGE12HA6NDE8 117 aa7.36□□□□□ -1.23
CLIP3-204ENST00000590559 NDUFS6O75380 124 aaKnown RBP7.36□□□□□ -1.23
CLIP3-204ENST00000590559 RPS10P46783 165 aaKnown RBP7.36□□□□□ -1.23
CLIP3-204ENST00000590559 GNG4P50150 75 aa7.36□□□□□ -1.23
CLIP3-204ENST00000590559 COTL1Q14019 142 aa7.36□□□□□ -1.23
CLIP3-204ENST00000590559 GATD1Q8NB37 220 aa7.36□□□□□ -1.23
CLIP3-204ENST00000590559 PRSS3P2Q8NHM4 247 aa7.36□□□□□ -1.23
CLIP3-204ENST00000590559 GVQW2A0A096LPI5 108 aaPredicted RBP7.35□□□□□ -1.23
CLIP3-204ENST00000590559 XKRY2A2RUG3 117 aa7.35□□□□□ -1.23
CLIP3-204ENST00000590559 UBE2L6O14933 153 aa7.35□□□□□ -1.23
CLIP3-204ENST00000590559 PDE6DO43924 150 aa7.35□□□□□ -1.23
CLIP3-204ENST00000590559 IFNA1P01562 189 aa7.35□□□□□ -1.23
CLIP3-204ENST00000590559 AMTP48728 403 aa7.35□□□□□ -1.23
CLIP3-204ENST00000590559 EIF5AP63241 154 aaKnown RBP7.35□□□□□ -1.23
CLIP3-204ENST00000590559 MEF2BQ02080 365 aaPredicted RBP7.35□□□□□ -1.23
CLIP3-204ENST00000590559 CFAP161Q6P656 301 aa7.35□□□□□ -1.23
CLIP3-204ENST00000590559 NUDT10Q8NFP7 164 aa7.35□□□□□ -1.23
CLIP3-204ENST00000590559 DPH3Q96FX2 82 aa7.35□□□□□ -1.23
CLIP3-204ENST00000590559 NUDT11Q96G61 164 aa7.35□□□□□ -1.23
CLIP3-204ENST00000590559 H7C423 109 aa7.34□□□□□ -1.23
CLIP3-204ENST00000590559 SULT1A2P50226 295 aa7.34□□□□□ -1.23
CLIP3-204ENST00000590559 PRR3P79522 188 aaKnown RBP7.34□□□□□ -1.23
CLIP3-204ENST00000590559 Q6ZNX1 250 aa7.34□□□□□ -1.23
CLIP3-204ENST00000590559 CHCHD10Q8WYQ3 142 aaPredicted RBP7.34□□□□□ -1.23
CLIP3-204ENST00000590559 TRAV26-2A0A0B4J265 109 aa7.33□□□□□ -1.24
CLIP3-204ENST00000590559 NCR2O95944 276 aa7.33□□□□□ -1.24
CLIP3-204ENST00000590559 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
CLIP3-204ENST00000590559 FOXI1Q12951 378 aa7.33□□□□□ -1.24
CLIP3-204ENST00000590559 HIGD2BQ4VC39 106 aa7.33□□□□□ -1.24
CLIP3-204ENST00000590559 C7orf33Q8WU49 177 aa7.33□□□□□ -1.24
CLIP3-204ENST00000590559 BIN3Q9NQY0 253 aa7.33□□□□□ -1.24
CLIP3-204ENST00000590559 A0A096LNI7 61 aa7.32□□□□□ -1.24
CLIP3-204ENST00000590559 FAM231BA6NCW3 169 aa7.32□□□□□ -1.24
CLIP3-204ENST00000590559 K7EN84 100 aa7.32□□□□□ -1.24
CLIP3-204ENST00000590559 ODF1Q14990 250 aa7.32□□□□□ -1.24
CLIP3-204ENST00000590559 TWIST1Q15672 202 aa7.32□□□□□ -1.24
CLIP3-204ENST00000590559 MAJINQ3KP22 176 aa7.32□□□□□ -1.24
CLIP3-204ENST00000590559 STPG4Q8N801 248 aa7.32□□□□□ -1.24
CLIP3-204ENST00000590559 GTSF1Q8WW33 167 aa7.32□□□□□ -1.24
CLIP3-204ENST00000590559 RPL39LQ96EH5 51 aaKnown RBP7.32□□□□□ -1.24
CLIP3-204ENST00000590559 MED9Q9NWA0 146 aa7.32□□□□□ -1.24
CLIP3-204ENST00000590559 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.31□□□□□ -1.24
CLIP3-204ENST00000590559 IGKV2-24A0A0C4DH68 120 aa7.31□□□□□ -1.24
CLIP3-204ENST00000590559 IGKV2-29A2NJV5 120 aaPredicted RBP7.31□□□□□ -1.24
CLIP3-204ENST00000590559 BCL2P10415 239 aa7.31□□□□□ -1.24
CLIP3-204ENST00000590559 FGF6P10767 208 aa7.31□□□□□ -1.24
CLIP3-204ENST00000590559 FOXA3P55318 350 aaPredicted RBP7.31□□□□□ -1.24
CLIP3-204ENST00000590559 SRSF9Q13242 221 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLIP3-204ENST00000590559 RNASE7Q9H1E1 156 aaKnown RBP7.31□□□□□ -1.24
CLIP3-204ENST00000590559 RPP21Q9H633 154 aaKnown RBP7.31□□□□□ -1.24
CLIP3-204ENST00000590559 LPAP08519 4548 aa7.31□□□□□ -1.24
CLIP3-204ENST00000590559 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
CLIP3-204ENST00000590559 A0A0J9YXV3 536 aa7.3□□□□□ -1.24
CLIP3-204ENST00000590559 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
CLIP3-204ENST00000590559 TEX46H3BTG2 121 aa7.3□□□□□ -1.24
CLIP3-204ENST00000590559 ESDP10768 282 aa7.3□□□□□ -1.24
CLIP3-204ENST00000590559 ZNF25P17030 456 aaPredicted RBP7.3□□□□□ -1.24
CLIP3-204ENST00000590559 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
CLIP3-204ENST00000590559 OCC1Q8TAD7 63 aa7.3□□□□□ -1.24
CLIP3-204ENST00000590559 TRBV6-5A0A0K0K1A5 114 aa7.29□□□□□ -1.24
CLIP3-204ENST00000590559 APCSP02743 223 aa7.29□□□□□ -1.24
CLIP3-204ENST00000590559 AMMECR1LQ6DCA0 310 aa7.29□□□□□ -1.24
CLIP3-204ENST00000590559 TEX261Q6UWH6 196 aa7.29□□□□□ -1.24
CLIP3-204ENST00000590559 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
CLIP3-204ENST00000590559 LINC00959A0A1B0GUT2 108 aa7.28□□□□□ -1.24
CLIP3-204ENST00000590559 EIF5AL1Q6IS14 154 aaKnown RBP7.28□□□□□ -1.24
CLIP3-204ENST00000590559 RNASEKQ6P5S7 137 aaKnown RBP7.28□□□□□ -1.24
CLIP3-204ENST00000590559 LYPD6BQ8NI32 183 aa7.28□□□□□ -1.24
CLIP3-204ENST00000590559 LINC00474Q9P2X8 69 aa7.28□□□□□ -1.24
CLIP3-204ENST00000590559 I3L3M4 83 aa7.27□□□□□ -1.25
CLIP3-204ENST00000590559 GAS8-AS1O95177 125 aa7.27□□□□□ -1.25
CLIP3-204ENST00000590559 TSHBP01222 138 aa7.27□□□□□ -1.25
CLIP3-204ENST00000590559 TAGLN2P37802 199 aaKnown RBP7.27□□□□□ -1.25
CLIP3-204ENST00000590559 LINC00526Q96FQ7 95 aa7.27□□□□□ -1.25
CLIP3-204ENST00000590559 FAM210AQ96ND0 272 aa7.27□□□□□ -1.25
CLIP3-204ENST00000590559 IGHV1-58A0A0C4DH39 117 aa7.26□□□□□ -1.25
CLIP3-204ENST00000590559 CCL25O15444 150 aa7.26□□□□□ -1.25
CLIP3-204ENST00000590559 XCL1P47992 114 aa7.26□□□□□ -1.25
CLIP3-204ENST00000590559 POLR2KP53803 58 aaKnown RBP7.26□□□□□ -1.25
CLIP3-204ENST00000590559 FAM231DQ6ZW35 169 aa7.26□□□□□ -1.25
CLIP3-204ENST00000590559 MRPL52Q86TS9 123 aaKnown RBP7.26□□□□□ -1.25
CLIP3-204ENST00000590559 CDC42SE2Q9NRR3 84 aa7.26□□□□□ -1.25
CLIP3-204ENST00000590559 CD164L2Q6UWJ8 174 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms