RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 COX11Q9Y6N1 276 aa13.99□□□□□ -0.17
LRP3-202ENST00000590275 Q0VG73 95 aa13.98□□□□□ -0.17
LRP3-202ENST00000590275 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.98□□□□□ -0.17
LRP3-202ENST00000590275 RNF185Q96GF1 192 aa13.98□□□□□ -0.17
LRP3-202ENST00000590275 SMR3BP02814 79 aaPredicted RBP13.96□□□□□ -0.17
LRP3-202ENST00000590275 TMEM241Q24JQ0 296 aa13.96□□□□□ -0.17
LRP3-202ENST00000590275 TMEM243Q9BU79 118 aa13.96□□□□□ -0.17
LRP3-202ENST00000590275 C1orf43Q9BWL3 253 aa13.96□□□□□ -0.17
LRP3-202ENST00000590275 NUP35Q8NFH5 326 aa13.95□□□□□ -0.18
LRP3-202ENST00000590275 A0A1B0GUT8 65 aa13.94□□□□□ -0.18
LRP3-202ENST00000590275 CRPP02741 224 aa13.94□□□□□ -0.18
LRP3-202ENST00000590275 PKIAP61925 76 aa13.94□□□□□ -0.18
LRP3-202ENST00000590275 FRZBQ92765 325 aa13.94□□□□□ -0.18
LRP3-202ENST00000590275 TMEM70Q9BUB7 260 aa13.94□□□□□ -0.18
LRP3-202ENST00000590275 FAM231BA6NCW3 169 aa13.93□□□□□ -0.18
LRP3-202ENST00000590275 RPS10P46783 165 aaKnown RBP13.93□□□□□ -0.18
LRP3-202ENST00000590275 COTL1Q14019 142 aa13.93□□□□□ -0.18
LRP3-202ENST00000590275 ADIRFQ15847 76 aa13.93□□□□□ -0.18
LRP3-202ENST00000590275 MIAQ16674 131 aa13.93□□□□□ -0.18
LRP3-202ENST00000590275 FAM74A3Q4VXF1 159 aa13.93□□□□□ -0.18
LRP3-202ENST00000590275 Q6ZSA8 131 aa13.93□□□□□ -0.18
LRP3-202ENST00000590275 A0A1B0GUV1 79 aa13.92□□□□□ -0.18
LRP3-202ENST00000590275 RAB4AP20338 218 aa13.92□□□□□ -0.18
LRP3-202ENST00000590275 AMTP48728 403 aa13.92□□□□□ -0.18
LRP3-202ENST00000590275 TMEM191AQ9H0A3 160 aa13.92□□□□□ -0.18
LRP3-202ENST00000590275 NAT8Q9UHE5 227 aa13.92□□□□□ -0.18
LRP3-202ENST00000590275 IGLV10-54A0A075B6I4 117 aa13.91□□□□□ -0.18
LRP3-202ENST00000590275 SDHAF1A6NFY7 115 aa13.91□□□□□ -0.18
LRP3-202ENST00000590275 USP17L23D6RBM5 183 aa13.91□□□□□ -0.18
LRP3-202ENST00000590275 HLA-DQA1P01909 254 aa13.91□□□□□ -0.18
LRP3-202ENST00000590275 REG3AQ06141 175 aa13.91□□□□□ -0.18
LRP3-202ENST00000590275 PEA15Q15121 130 aa13.91□□□□□ -0.18
LRP3-202ENST00000590275 SMIM15Q7Z3B0 74 aa13.91□□□□□ -0.18
LRP3-202ENST00000590275 AMN1Q8IY45 258 aa13.91□□□□□ -0.18
LRP3-202ENST00000590275 TRBV6-5A0A0K0K1A5 114 aa13.9□□□□□ -0.18
LRP3-202ENST00000590275 SMKR1H3BMG3 65 aa13.9□□□□□ -0.18
LRP3-202ENST00000590275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.89□□□□□ -0.19
LRP3-202ENST00000590275 IGKV2-29A2NJV5 120 aaPredicted RBP13.89□□□□□ -0.19
LRP3-202ENST00000590275 EPM2AB3EWF7 344 aa13.89□□□□□ -0.19
LRP3-202ENST00000590275 PRSS1P07477 247 aa13.89□□□□□ -0.19
LRP3-202ENST00000590275 Q5VSD8 79 aa13.89□□□□□ -0.19
LRP3-202ENST00000590275 SMIM27A0A1W2PRY6 76 aa13.88□□□□□ -0.19
LRP3-202ENST00000590275 NCR2O95944 276 aa13.87□□□□□ -0.19
LRP3-202ENST00000590275 TSHBP01222 138 aa13.87□□□□□ -0.19
LRP3-202ENST00000590275 BORCS7Q96B45 105 aa13.87□□□□□ -0.19
LRP3-202ENST00000590275 SMDT1Q9H4I9 107 aa13.87□□□□□ -0.19
LRP3-202ENST00000590275 POLR2KP53803 58 aaKnown RBP13.86□□□□□ -0.19
LRP3-202ENST00000590275 NRACQ8N912 160 aa13.85□□□□□ -0.19
LRP3-202ENST00000590275 TMEM242Q9NWH2 141 aa13.85□□□□□ -0.19
LRP3-202ENST00000590275 NAT8BQ9UHF3 227 aa13.85□□□□□ -0.19
LRP3-202ENST00000590275 MYCBP2O75592 4640 aa13.84□□□□□ -0.19
LRP3-202ENST00000590275 UBE2L6O14933 153 aa13.84□□□□□ -0.19
LRP3-202ENST00000590275 ESDP10768 282 aa13.84□□□□□ -0.19
LRP3-202ENST00000590275 RIGQ13278 110 aa13.84□□□□□ -0.19
LRP3-202ENST00000590275 I3L3M4 83 aa13.83□□□□□ -0.2
LRP3-202ENST00000590275 APCSP02743 223 aa13.83□□□□□ -0.2
LRP3-202ENST00000590275 PMCHP20382 165 aa13.83□□□□□ -0.2
LRP3-202ENST00000590275 MRAP2Q96G30 205 aa13.83□□□□□ -0.2
LRP3-202ENST00000590275 ST20Q9HBF5 79 aa13.83□□□□□ -0.2
LRP3-202ENST00000590275 SRRM2Q9UQ35 2752 aaKnown RBP13.83□□□□□ -0.2
LRP3-202ENST00000590275 FGF6P10767 208 aa13.82□□□□□ -0.2
LRP3-202ENST00000590275 MRPL51Q4U2R6 128 aaKnown RBP13.82□□□□□ -0.2
LRP3-202ENST00000590275 SCXQ7RTU7 201 aa13.82□□□□□ -0.2
LRP3-202ENST00000590275 SLPIP03973 132 aa13.81□□□□□ -0.2
LRP3-202ENST00000590275 TRAV8-4A0A0B4J246 113 aa13.8□□□□□ -0.2
LRP3-202ENST00000590275 IGKV3OR2-268A0A0C4DH90 116 aa13.8□□□□□ -0.2
LRP3-202ENST00000590275 TRBV27A0A0K0K1C4 114 aa13.8□□□□□ -0.2
LRP3-202ENST00000590275 CAMPP49913 170 aa13.8□□□□□ -0.2
LRP3-202ENST00000590275 C14orf177Q52M58 125 aa13.8□□□□□ -0.2
LRP3-202ENST00000590275 FAM104BQ5XKR9 115 aa13.8□□□□□ -0.2
LRP3-202ENST00000590275 A0A1B0GXF2 115 aa13.79□□□□□ -0.2
LRP3-202ENST00000590275 IFITM2Q01629 132 aa13.79□□□□□ -0.2
LRP3-202ENST00000590275 RNASEKQ6P5S7 137 aaKnown RBP13.79□□□□□ -0.2
LRP3-202ENST00000590275 MRPL54Q6P161 138 aaKnown RBP13.78□□□□□ -0.2
LRP3-202ENST00000590275 HERC1Q15751 4861 aa13.77□□□□□ -0.2
LRP3-202ENST00000590275 GAGE12HA6NDE8 117 aa13.77□□□□□ -0.21
LRP3-202ENST00000590275 H7C423 109 aa13.77□□□□□ -0.21
LRP3-202ENST00000590275 PANO1I0J062 215 aa13.77□□□□□ -0.21
LRP3-202ENST00000590275 INAFM2P0DMQ5 153 aa13.77□□□□□ -0.21
LRP3-202ENST00000590275 AMMECR1LQ6DCA0 310 aa13.77□□□□□ -0.21
LRP3-202ENST00000590275 C15orf56Q8N910 161 aa13.77□□□□□ -0.21
LRP3-202ENST00000590275 CIRBP-AS1Q8TBR5 109 aa13.77□□□□□ -0.21
LRP3-202ENST00000590275 CHAC1Q9BUX1 264 aa13.76□□□□□ -0.21
LRP3-202ENST00000590275 C9orf163Q8N9P6 203 aa13.75□□□□□ -0.21
LRP3-202ENST00000590275 CHCHD10Q8WYQ3 142 aaPredicted RBP13.75□□□□□ -0.21
LRP3-202ENST00000590275 SUMO2P61956 95 aaKnown RBP13.74□□□□□ -0.21
LRP3-202ENST00000590275 DGAT2L7PQ6IED9 249 aa13.74□□□□□ -0.21
LRP3-202ENST00000590275 FAM229AH3BQW9 127 aa13.73□□□□□ -0.21
LRP3-202ENST00000590275 CLLU1Q5K131 121 aa13.73□□□□□ -0.21
LRP3-202ENST00000590275 SDIM1Q6ZPB5 146 aa13.73□□□□□ -0.21
LRP3-202ENST00000590275 LINC00528Q8N1L1 170 aa13.73□□□□□ -0.21
LRP3-202ENST00000590275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.73□□□□□ -0.21
LRP3-202ENST00000590275 hDV102S1A0JD36 115 aa13.72□□□□□ -0.21
LRP3-202ENST00000590275 VCYO14598 125 aa13.72□□□□□ -0.21
LRP3-202ENST00000590275 ZNF25P17030 456 aaPredicted RBP13.72□□□□□ -0.21
LRP3-202ENST00000590275 KRTAP10-4P60372 401 aaPredicted RBP13.72□□□□□ -0.21
LRP3-202ENST00000590275 FOXI1Q12951 378 aa13.72□□□□□ -0.21
LRP3-202ENST00000590275 MRPL52Q86TS9 123 aaKnown RBP13.72□□□□□ -0.21
LRP3-202ENST00000590275 CLRN3Q8NCR9 226 aa13.72□□□□□ -0.21
LRP3-202ENST00000590275 OR5A1Q8NGJ0 315 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms