RNA–Protein interactions for RNA: ENST00000589969.1

NFIC-209, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-209ENST00000589969 RPP21Q9H633 154 aaKnown RBP13.35□□□□□ -0.27
NFIC-209ENST00000589969 UBE2L6O14933 153 aa13.34□□□□□ -0.27
NFIC-209ENST00000589969 KRTAP10-4P60372 401 aaPredicted RBP13.34□□□□□ -0.27
NFIC-209ENST00000589969 COTL1Q14019 142 aa13.34□□□□□ -0.27
NFIC-209ENST00000589969 IGLV10-54A0A075B6I4 117 aa13.33□□□□□ -0.28
NFIC-209ENST00000589969 AKAP14Q86UN6 197 aa13.33□□□□□ -0.28
NFIC-209ENST00000589969 AMTP48728 403 aa13.32□□□□□ -0.28
NFIC-209ENST00000589969 IGLV4-60A0A075B6I1 120 aa13.31□□□□□ -0.28
NFIC-209ENST00000589969 CNBPP62633 177 aaKnown RBP13.31□□□□□ -0.28
NFIC-209ENST00000589969 SMIM15Q7Z3B0 74 aa13.31□□□□□ -0.28
NFIC-209ENST00000589969 OCC1Q8TAD7 63 aa13.31□□□□□ -0.28
NFIC-209ENST00000589969 RNASE7Q9H1E1 156 aaKnown RBP13.31□□□□□ -0.28
NFIC-209ENST00000589969 K7EN84 100 aa13.3□□□□□ -0.28
NFIC-209ENST00000589969 OXTP01178 125 aa13.3□□□□□ -0.28
NFIC-209ENST00000589969 hDV102S1A0JD36 115 aa13.29□□□□□ -0.28
NFIC-209ENST00000589969 TMEM250H0YL14 139 aa13.29□□□□□ -0.28
NFIC-209ENST00000589969 RPL37AP61513 92 aaKnown RBP13.29□□□□□ -0.28
NFIC-209ENST00000589969 TEX261Q6UWH6 196 aa13.29□□□□□ -0.28
NFIC-209ENST00000589969 SDIM1Q6ZPB5 146 aa13.29□□□□□ -0.28
NFIC-209ENST00000589969 GATD1Q8NB37 220 aa13.29□□□□□ -0.28
NFIC-209ENST00000589969 AP5S1Q9NUS5 200 aa13.29□□□□□ -0.28
NFIC-209ENST00000589969 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.28□□□□□ -0.28
NFIC-209ENST00000589969 BLOC1S1P78537 153 aa13.28□□□□□ -0.28
NFIC-209ENST00000589969 GFRA4Q9GZZ7 299 aa13.28□□□□□ -0.28
NFIC-209ENST00000589969 NCR2O95944 276 aa13.27□□□□□ -0.29
NFIC-209ENST00000589969 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.27□□□□□ -0.29
NFIC-209ENST00000589969 GTSF1Q8WW33 167 aa13.26□□□□□ -0.29
NFIC-209ENST00000589969 IGHV3-64A0A075B6Q5 118 aa13.25□□□□□ -0.29
NFIC-209ENST00000589969 TRAV26-2A0A0B4J265 109 aa13.25□□□□□ -0.29
NFIC-209ENST00000589969 A8MWL6 223 aa13.25□□□□□ -0.29
NFIC-209ENST00000589969 H7C423 109 aa13.25□□□□□ -0.29
NFIC-209ENST00000589969 GATCO43716 136 aaKnown RBP13.25□□□□□ -0.29
NFIC-209ENST00000589969 CFAP161Q6P656 301 aa13.25□□□□□ -0.29
NFIC-209ENST00000589969 FAM231DQ6ZW35 169 aa13.25□□□□□ -0.29
NFIC-209ENST00000589969 LRP1Q07954 4544 aaKnown RBP13.25□□□□□ -0.29
NFIC-209ENST00000589969 AMMECR1LQ6DCA0 310 aa13.24□□□□□ -0.29
NFIC-209ENST00000589969 CIRBPQ14011 172 aaKnown RBP13.23□□□□□ -0.29
NFIC-209ENST00000589969 CT83Q5H943 113 aa13.23□□□□□ -0.29
NFIC-209ENST00000589969 LYPD6BQ8NI32 183 aa13.23□□□□□ -0.29
NFIC-209ENST00000589969 APCSP02743 223 aa13.22□□□□□ -0.29
NFIC-209ENST00000589969 SERTAD4-AS1Q5TG53 156 aa13.22□□□□□ -0.29
NFIC-209ENST00000589969 ALKAL2Q6UX46 152 aa13.22□□□□□ -0.29
NFIC-209ENST00000589969 BORCS7Q96B45 105 aa13.22□□□□□ -0.29
NFIC-209ENST00000589969 RPL39LQ96EH5 51 aaKnown RBP13.22□□□□□ -0.29
NFIC-209ENST00000589969 RNF185Q96GF1 192 aa13.22□□□□□ -0.29
NFIC-209ENST00000589969 GAGE12HA6NDE8 117 aa13.21□□□□□ -0.29
NFIC-209ENST00000589969 PANO1I0J062 215 aa13.21□□□□□ -0.29
NFIC-209ENST00000589969 FOXA3P55318 350 aaPredicted RBP13.21□□□□□ -0.29
NFIC-209ENST00000589969 FAM210AQ96ND0 272 aa13.21□□□□□ -0.29
NFIC-209ENST00000589969 FAT3Q8TDW7 4589 aa13.21□□□□□ -0.3
NFIC-209ENST00000589969 SDHAF1A6NFY7 115 aa13.2□□□□□ -0.3
NFIC-209ENST00000589969 SLPIP03973 132 aa13.2□□□□□ -0.3
NFIC-209ENST00000589969 DPH3Q96FX2 82 aa13.2□□□□□ -0.3
NFIC-209ENST00000589969 IGKV3OR2-268A0A0C4DH90 116 aa13.19□□□□□ -0.3
NFIC-209ENST00000589969 TRBV6-5A0A0K0K1A5 114 aa13.19□□□□□ -0.3
NFIC-209ENST00000589969 I3L3M4 83 aa13.19□□□□□ -0.3
NFIC-209ENST00000589969 NDUFS6O75380 124 aaKnown RBP13.19□□□□□ -0.3
NFIC-209ENST00000589969 ZNF25P17030 456 aaPredicted RBP13.19□□□□□ -0.3
NFIC-209ENST00000589969 RNASEKQ6P5S7 137 aaKnown RBP13.19□□□□□ -0.3
NFIC-209ENST00000589969 FGF6P10767 208 aa13.18□□□□□ -0.3
NFIC-209ENST00000589969 PMCHP20382 165 aa13.18□□□□□ -0.3
NFIC-209ENST00000589969 CEBPGP53567 150 aa13.18□□□□□ -0.3
NFIC-209ENST00000589969 C15orf56Q8N910 161 aa13.18□□□□□ -0.3
NFIC-209ENST00000589969 CHCHD10Q8WYQ3 142 aaPredicted RBP13.18□□□□□ -0.3
NFIC-209ENST00000589969 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.17□□□□□ -0.3
NFIC-209ENST00000589969 IGKV2-29A2NJV5 120 aaPredicted RBP13.17□□□□□ -0.3
NFIC-209ENST00000589969 SMIM7Q9BQ49 75 aa13.17□□□□□ -0.3
NFIC-209ENST00000589969 FAM231BA6NCW3 169 aa13.16□□□□□ -0.3
NFIC-209ENST00000589969 RPS10P46783 165 aaKnown RBP13.16□□□□□ -0.3
NFIC-209ENST00000589969 TSKUQ8WUA8 353 aa13.16□□□□□ -0.3
NFIC-209ENST00000589969 BTF3L4Q96K17 158 aa13.16□□□□□ -0.3
NFIC-209ENST00000589969 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
NFIC-209ENST00000589969 A0A1B0GUT8 65 aa13.15□□□□□ -0.3
NFIC-209ENST00000589969 LINC01551Q86U37 167 aa13.15□□□□□ -0.3
NFIC-209ENST00000589969 SPACA4Q8TDM5 124 aa13.15□□□□□ -0.3
NFIC-209ENST00000589969 TMEM101Q96IK0 257 aa13.15□□□□□ -0.3
NFIC-209ENST00000589969 ST20Q9HBF5 79 aa13.15□□□□□ -0.3
NFIC-209ENST00000589969 PKHD1L1Q86WI1 4243 aa13.14□□□□□ -0.31
NFIC-209ENST00000589969 A0A087WYN8 130 aa13.14□□□□□ -0.31
NFIC-209ENST00000589969 OR5A1Q8NGJ0 315 aa13.14□□□□□ -0.31
NFIC-209ENST00000589969 TMEM191AQ9H0A3 160 aa13.14□□□□□ -0.31
NFIC-209ENST00000589969 GVQW2A0A096LPI5 108 aaPredicted RBP13.13□□□□□ -0.31
NFIC-209ENST00000589969 HIGD1CA8MV81 97 aa13.13□□□□□ -0.31
NFIC-209ENST00000589969 HNRNPA3P51991 378 aaKnown RBP13.13□□□□□ -0.31
NFIC-209ENST00000589969 OSTCQ9NRP0 149 aa13.13□□□□□ -0.31
NFIC-209ENST00000589969 ZNF727A8MUV8 499 aa13.12□□□□□ -0.31
NFIC-209ENST00000589969 CHTF8P0CG12 524 aa13.12□□□□□ -0.31
NFIC-209ENST00000589969 ESDP10768 282 aa13.12□□□□□ -0.31
NFIC-209ENST00000589969 HIGD2BQ4VC39 106 aa13.12□□□□□ -0.31
NFIC-209ENST00000589969 MRAP2Q96G30 205 aa13.12□□□□□ -0.31
NFIC-209ENST00000589969 PLAC8Q9NZF1 115 aa13.12□□□□□ -0.31
NFIC-209ENST00000589969 TSHBP01222 138 aa13.11□□□□□ -0.31
NFIC-209ENST00000589969 COX6A2Q02221 97 aa13.11□□□□□ -0.31
NFIC-209ENST00000589969 FOXI1Q12951 378 aa13.11□□□□□ -0.31
NFIC-209ENST00000589969 Q6ZRU5 148 aa13.11□□□□□ -0.31
NFIC-209ENST00000589969 HMCN2Q8NDA2 5059 aa13.11□□□□□ -0.31
NFIC-209ENST00000589969 PKIGQ9Y2B9 76 aa13.1□□□□□ -0.31
NFIC-209ENST00000589969 TRBV27A0A0K0K1C4 114 aa13.09□□□□□ -0.31
NFIC-209ENST00000589969 LINC00959A0A1B0GUT2 108 aa13.09□□□□□ -0.31
NFIC-209ENST00000589969 RAB4AP20338 218 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms