RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 HLA-DRB4X5D2U9 266 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 IGLV11-55A0A075B6I3 123 aa5.48□□□□□ -1.53
SMAD4-209ENST00000589941 TRAV8-6A0A0B4J262 113 aa5.48□□□□□ -1.53
SMAD4-209ENST00000589941 NCR2O95944 276 aa5.48□□□□□ -1.53
SMAD4-209ENST00000589941 HLA-DMBP28068 263 aa5.48□□□□□ -1.53
SMAD4-209ENST00000589941 HSD52Q0P140 79 aa5.48□□□□□ -1.53
SMAD4-209ENST00000589941 ORMDL3Q8N138 153 aa5.48□□□□□ -1.53
SMAD4-209ENST00000589941 HIGD1BQ9P298 99 aa5.48□□□□□ -1.53
SMAD4-209ENST00000589941 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
SMAD4-209ENST00000589941 A0A087X0K7 114 aa5.47□□□□□ -1.53
SMAD4-209ENST00000589941 H3BTX0 84 aa5.47□□□□□ -1.53
SMAD4-209ENST00000589941 SH2D1AO60880 128 aa5.47□□□□□ -1.53
SMAD4-209ENST00000589941 HBDP02042 147 aa5.47□□□□□ -1.53
SMAD4-209ENST00000589941 FUSP35637 526 aaKnown RBP eCLIP5.47□□□□□ -1.53
SMAD4-209ENST00000589941 ZNF138P52744 262 aa5.47□□□□□ -1.53
SMAD4-209ENST00000589941 PLGLAQ15195 96 aa5.47□□□□□ -1.53
SMAD4-209ENST00000589941 MRPL51Q4U2R6 128 aaKnown RBP5.47□□□□□ -1.53
SMAD4-209ENST00000589941 OR11H2Q8NH07 326 aa5.47□□□□□ -1.53
SMAD4-209ENST00000589941 PRELID3AQ96N28 172 aa5.47□□□□□ -1.53
SMAD4-209ENST00000589941 TRAV10A0A0B4J240 114 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 C7orf71A4D174 169 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 TMEM189A5PLL7 270 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 A6NDN8 102 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 D6R8Y8 96 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 K7EP34 96 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 CIDEAO60543 219 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 SMR3BP02814 79 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-209ENST00000589941 IFI27P40305 119 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-209ENST00000589941 MFAP4P55083 255 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 AMMECR1LQ6DCA0 310 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 LYZL1Q6UWQ5 148 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 NEGR1Q7Z3B1 354 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 TTC9CQ8N5M4 171 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 Q8NAQ8 132 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 RNF185Q96GF1 192 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 C17orf77Q96MU5 243 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 RABAC1Q9UI14 185 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 CELA1Q9UNI1 258 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 FAT4Q6V0I7 4981 aa5.46□□□□□ -1.54
SMAD4-209ENST00000589941 IGHV3-21A0A0B4J1V1 117 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 TMEM213A2RRL7 107 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 RBAKDNA6NC62 111 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 PRAC2D3DTV9 90 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 K7ERU9 68 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 RPL7P18124 248 aaKnown RBP5.45□□□□□ -1.54
SMAD4-209ENST00000589941 HAMPP81172 84 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 FAM106AQ4KMX7 169 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 UBE2DNLQ8IWF7 75 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 OR5A1Q8NGJ0 315 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 KIR2DL5BQ8NHK3 375 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 IFI27L1Q96BM0 104 aa5.45□□□□□ -1.54
SMAD4-209ENST00000589941 M0R3E3 92 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 NPYP01303 97 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 IL4P05112 153 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 SMIM17P0DL12 118 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 APELAP0DMC3 54 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 EVI2AP22794 236 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 FCER1GP30273 86 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 S100A7P31151 101 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
SMAD4-209ENST00000589941 ZNF562Q6V9R5 426 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 GTF2H5Q6ZYL4 71 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 SMIM15Q7Z3B0 74 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 AMN1Q8IY45 258 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 FER1L6-AS1Q8NA97 138 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 MRPL53Q96EL3 112 aaKnown RBP5.44□□□□□ -1.54
SMAD4-209ENST00000589941 NXT2Q9NPJ8 142 aaKnown RBP5.44□□□□□ -1.54
SMAD4-209ENST00000589941 SMPXQ9UHP9 88 aa5.44□□□□□ -1.54
SMAD4-209ENST00000589941 A0A0G2JLM5 398 aa5.43□□□□□ -1.54
SMAD4-209ENST00000589941 H3BUA1 57 aa5.43□□□□□ -1.54
SMAD4-209ENST00000589941 VCYO14598 125 aa5.43□□□□□ -1.54
SMAD4-209ENST00000589941 CACNG7P62955 275 aa5.43□□□□□ -1.54
SMAD4-209ENST00000589941 APRG1Q8IVJ8 170 aa5.43□□□□□ -1.54
SMAD4-209ENST00000589941 CSTL1Q9H114 145 aa5.43□□□□□ -1.54
SMAD4-209ENST00000589941 C21orf62Q9NYP8 219 aa5.43□□□□□ -1.54
SMAD4-209ENST00000589941 HHLA3Q9XRX5 114 aa5.43□□□□□ -1.54
SMAD4-209ENST00000589941 DEFB131BA0A096LNP1 70 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 A0A1W2PPM0 123 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 BUB3O43684 328 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 GNG7O60262 68 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 SCGB2A1O75556 95 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 ATP5LO75964 103 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 ZNF80P51504 273 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-209ENST00000589941 TAL2Q16559 108 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 C6orf223Q8N319 242 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 Q8N8P6 123 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 OR8A1Q8NGG7 326 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 ATP6V0BQ99437 205 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 MAP1LC3AQ9H492 121 aa5.42□□□□□ -1.54
SMAD4-209ENST00000589941 IGKV2-40A0A087WW87 121 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-209ENST00000589941 FABP5P3A8MUU1 101 aa5.41□□□□□ -1.54
SMAD4-209ENST00000589941 SNAI2O43623 268 aa5.41□□□□□ -1.54
SMAD4-209ENST00000589941 IGKV2D-40P01614 121 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-209ENST00000589941 CTSGP08311 255 aa5.41□□□□□ -1.54
SMAD4-209ENST00000589941 CKS2P33552 79 aa5.41□□□□□ -1.54
SMAD4-209ENST00000589941 C12orf74Q32Q52 190 aa5.41□□□□□ -1.54
SMAD4-209ENST00000589941 SLC50A1Q9BRV3 221 aa5.41□□□□□ -1.54
SMAD4-209ENST00000589941 THYN1Q9P016 225 aa5.41□□□□□ -1.54
SMAD4-209ENST00000589941 A0A087WYN8 130 aa5.4□□□□□ -1.54
SMAD4-209ENST00000589941 A0A1B0GWB2 263 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms