RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 C9orf62Q8N4C0 152 aa13.57□□□□□ -0.24
TMC6-213ENST00000589933 IGHV3-64A0A075B6Q5 118 aa13.56□□□□□ -0.24
TMC6-213ENST00000589933 BCL2P10415 239 aa13.56□□□□□ -0.24
TMC6-213ENST00000589933 TWIST1Q15672 202 aa13.56□□□□□ -0.24
TMC6-213ENST00000589933 CFAP161Q6P656 301 aa13.56□□□□□ -0.24
TMC6-213ENST00000589933 SDIM1Q6ZPB5 146 aa13.56□□□□□ -0.24
TMC6-213ENST00000589933 SMIM15Q7Z3B0 74 aa13.56□□□□□ -0.24
TMC6-213ENST00000589933 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.55□□□□□ -0.24
TMC6-213ENST00000589933 IGLV4-60A0A075B6I1 120 aa13.54□□□□□ -0.24
TMC6-213ENST00000589933 CTRLP40313 264 aa13.54□□□□□ -0.24
TMC6-213ENST00000589933 NUDT10Q8NFP7 164 aa13.54□□□□□ -0.24
TMC6-213ENST00000589933 NUDT11Q96G61 164 aa13.54□□□□□ -0.24
TMC6-213ENST00000589933 AMMECR1LQ6DCA0 310 aa13.53□□□□□ -0.24
TMC6-213ENST00000589933 RPP21Q9H633 154 aaKnown RBP13.53□□□□□ -0.24
TMC6-213ENST00000589933 TRBV20OR9-2A0A075B6H5 130 aa13.52□□□□□ -0.25
TMC6-213ENST00000589933 SLC51BQ86UW2 128 aa13.52□□□□□ -0.25
TMC6-213ENST00000589933 RNF185Q96GF1 192 aa13.52□□□□□ -0.25
TMC6-213ENST00000589933 TEX261Q6UWH6 196 aa13.51□□□□□ -0.25
TMC6-213ENST00000589933 CNFNQ9BYD5 112 aa13.51□□□□□ -0.25
TMC6-213ENST00000589933 NCR2O95944 276 aa13.49□□□□□ -0.25
TMC6-213ENST00000589933 CIRBPQ14011 172 aaKnown RBP13.49□□□□□ -0.25
TMC6-213ENST00000589933 GFRA4Q9GZZ7 299 aa13.49□□□□□ -0.25
TMC6-213ENST00000589933 PLA2G2DQ9UNK4 145 aa13.49□□□□□ -0.25
TMC6-213ENST00000589933 IGKV3OR2-268A0A0C4DH90 116 aa13.48□□□□□ -0.25
TMC6-213ENST00000589933 H7C423 109 aa13.48□□□□□ -0.25
TMC6-213ENST00000589933 RNASE7Q9H1E1 156 aaKnown RBP13.48□□□□□ -0.25
TMC6-213ENST00000589933 GAGE12HA6NDE8 117 aa13.47□□□□□ -0.25
TMC6-213ENST00000589933 RNASEKQ6P5S7 137 aaKnown RBP13.47□□□□□ -0.25
TMC6-213ENST00000589933 TCTE3Q8IZS6 198 aa13.47□□□□□ -0.25
TMC6-213ENST00000589933 GATD1Q8NB37 220 aa13.47□□□□□ -0.25
TMC6-213ENST00000589933 PANO1I0J062 215 aa13.46□□□□□ -0.25
TMC6-213ENST00000589933 APCSP02743 223 aa13.46□□□□□ -0.25
TMC6-213ENST00000589933 Q6ZRU5 148 aa13.46□□□□□ -0.25
TMC6-213ENST00000589933 OCC1Q8TAD7 63 aa13.46□□□□□ -0.25
TMC6-213ENST00000589933 TRAV26-2A0A0B4J265 109 aa13.45□□□□□ -0.26
TMC6-213ENST00000589933 RPS10P46783 165 aaKnown RBP13.45□□□□□ -0.26
TMC6-213ENST00000589933 Q6ZNX1 250 aa13.45□□□□□ -0.26
TMC6-213ENST00000589933 C7orf33Q8WU49 177 aa13.45□□□□□ -0.26
TMC6-213ENST00000589933 BORCS7Q96B45 105 aa13.45□□□□□ -0.26
TMC6-213ENST00000589933 A0A087WYN8 130 aa13.44□□□□□ -0.26
TMC6-213ENST00000589933 A8MWL6 223 aa13.44□□□□□ -0.26
TMC6-213ENST00000589933 GATCO43716 136 aaKnown RBP13.44□□□□□ -0.26
TMC6-213ENST00000589933 BTF3L4Q96K17 158 aa13.44□□□□□ -0.26
TMC6-213ENST00000589933 HNRNPA3P51991 378 aaKnown RBP13.43□□□□□ -0.26
TMC6-213ENST00000589933 BLOC1S1P78537 153 aa13.43□□□□□ -0.26
TMC6-213ENST00000589933 SPACA4Q8TDM5 124 aa13.43□□□□□ -0.26
TMC6-213ENST00000589933 TMEM101Q96IK0 257 aa13.43□□□□□ -0.26
TMC6-213ENST00000589933 PKIGQ9Y2B9 76 aa13.43□□□□□ -0.26
TMC6-213ENST00000589933 SDHAF1A6NFY7 115 aa13.42□□□□□ -0.26
TMC6-213ENST00000589933 TMEM250H0YL14 139 aa13.42□□□□□ -0.26
TMC6-213ENST00000589933 K7EN84 100 aa13.42□□□□□ -0.26
TMC6-213ENST00000589933 SLPIP03973 132 aa13.42□□□□□ -0.26
TMC6-213ENST00000589933 ZNF25P17030 456 aaPredicted RBP13.42□□□□□ -0.26
TMC6-213ENST00000589933 PMCHP20382 165 aa13.42□□□□□ -0.26
TMC6-213ENST00000589933 CHCHD10Q8WYQ3 142 aaPredicted RBP13.42□□□□□ -0.26
TMC6-213ENST00000589933 RPL39LQ96EH5 51 aaKnown RBP13.42□□□□□ -0.26
TMC6-213ENST00000589933 I3L3M4 83 aa13.41□□□□□ -0.26
TMC6-213ENST00000589933 NDUFS6O75380 124 aaKnown RBP13.41□□□□□ -0.26
TMC6-213ENST00000589933 CHTF8P0CG12 524 aa13.41□□□□□ -0.26
TMC6-213ENST00000589933 FGF6P10767 208 aa13.41□□□□□ -0.26
TMC6-213ENST00000589933 C15orf56Q8N910 161 aa13.41□□□□□ -0.26
TMC6-213ENST00000589933 FAM210AQ96ND0 272 aa13.41□□□□□ -0.26
TMC6-213ENST00000589933 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.4□□□□□ -0.26
TMC6-213ENST00000589933 IGKV2-29A2NJV5 120 aaPredicted RBP13.4□□□□□ -0.26
TMC6-213ENST00000589933 COX6A2Q02221 97 aa13.4□□□□□ -0.26
TMC6-213ENST00000589933 HIGD2BQ4VC39 106 aa13.4□□□□□ -0.26
TMC6-213ENST00000589933 FAM231DQ6ZW35 169 aa13.4□□□□□ -0.26
TMC6-213ENST00000589933 GTSF1Q8WW33 167 aa13.4□□□□□ -0.26
TMC6-213ENST00000589933 PLAC8Q9NZF1 115 aa13.39□□□□□ -0.27
TMC6-213ENST00000589933 MAJINQ3KP22 176 aa13.38□□□□□ -0.27
TMC6-213ENST00000589933 CT83Q5H943 113 aa13.38□□□□□ -0.27
TMC6-213ENST00000589933 OR5A1Q8NGJ0 315 aa13.38□□□□□ -0.27
TMC6-213ENST00000589933 GVQW2A0A096LPI5 108 aaPredicted RBP13.37□□□□□ -0.27
TMC6-213ENST00000589933 CEBPGP53567 150 aa13.37□□□□□ -0.27
TMC6-213ENST00000589933 ST20Q9HBF5 79 aa13.37□□□□□ -0.27
TMC6-213ENST00000589933 IGKV2-24A0A0C4DH68 120 aa13.36□□□□□ -0.27
TMC6-213ENST00000589933 TRBV6-5A0A0K0K1A5 114 aa13.36□□□□□ -0.27
TMC6-213ENST00000589933 FOXA3P55318 350 aaPredicted RBP13.36□□□□□ -0.27
TMC6-213ENST00000589933 MRAP2Q96G30 205 aa13.36□□□□□ -0.27
TMC6-213ENST00000589933 LINC00474Q9P2X8 69 aa13.36□□□□□ -0.27
TMC6-213ENST00000589933 LRP1Q07954 4544 aaKnown RBP13.35□□□□□ -0.27
TMC6-213ENST00000589933 SS18Q15532 418 aa13.35□□□□□ -0.27
TMC6-213ENST00000589933 PHOX2AO14813 284 aa13.34□□□□□ -0.27
TMC6-213ENST00000589933 XCL1P47992 114 aa13.34□□□□□ -0.27
TMC6-213ENST00000589933 PRSS3P2Q8NHM4 247 aa13.34□□□□□ -0.27
TMC6-213ENST00000589933 IGHV1-58A0A0C4DH39 117 aa13.33□□□□□ -0.28
TMC6-213ENST00000589933 A0A1B0GUT8 65 aa13.33□□□□□ -0.28
TMC6-213ENST00000589933 SMAGPQ0VAQ4 97 aa13.33□□□□□ -0.28
TMC6-213ENST00000589933 FOXI1Q12951 378 aa13.33□□□□□ -0.28
TMC6-213ENST00000589933 ALKAL2Q6UX46 152 aa13.33□□□□□ -0.28
TMC6-213ENST00000589933 STPG4Q8N801 248 aa13.33□□□□□ -0.28
TMC6-213ENST00000589933 CCL25O15444 150 aa13.32□□□□□ -0.28
TMC6-213ENST00000589933 AKAP14Q86UN6 197 aa13.32□□□□□ -0.28
TMC6-213ENST00000589933 SMIM7Q9BQ49 75 aa13.32□□□□□ -0.28
TMC6-213ENST00000589933 EIF5A2Q9GZV4 153 aaKnown RBP13.32□□□□□ -0.28
TMC6-213ENST00000589933 LINC00959A0A1B0GUT2 108 aa13.31□□□□□ -0.28
TMC6-213ENST00000589933 FAM231BA6NCW3 169 aa13.31□□□□□ -0.28
TMC6-213ENST00000589933 ZNF561-AS1K7EIQ3 104 aa13.31□□□□□ -0.28
TMC6-213ENST00000589933 TSKUQ8WUA8 353 aa13.31□□□□□ -0.28
TMC6-213ENST00000589933 TMEM191AQ9H0A3 160 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms