RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 MRAP2Q96G30 205 aa11.64□□□□□ -0.55
H3F3B-207ENST00000589417 TMEM243Q9BU79 118 aa11.64□□□□□ -0.55
H3F3B-207ENST00000589417 HSPG2P98160 4391 aa11.63□□□□□ -0.55
H3F3B-207ENST00000589417 GAGE6Q13070 117 aa11.63□□□□□ -0.55
H3F3B-207ENST00000589417 SDHAF1A6NFY7 115 aa11.62□□□□□ -0.55
H3F3B-207ENST00000589417 PPP1R2P9O14990 202 aa11.62□□□□□ -0.55
H3F3B-207ENST00000589417 ANGP03950 147 aaKnown RBP11.62□□□□□ -0.55
H3F3B-207ENST00000589417 MIAQ16674 131 aa11.62□□□□□ -0.55
H3F3B-207ENST00000589417 IGKV2D-24A0A075B6R9 120 aa11.61□□□□□ -0.55
H3F3B-207ENST00000589417 GAS8-AS1O95177 125 aa11.61□□□□□ -0.55
H3F3B-207ENST00000589417 POLR2KP53803 58 aaKnown RBP11.61□□□□□ -0.55
H3F3B-207ENST00000589417 AMN1Q8IY45 258 aa11.61□□□□□ -0.55
H3F3B-207ENST00000589417 H7C423 109 aa11.6□□□□□ -0.55
H3F3B-207ENST00000589417 PPP1R17O96001 155 aa11.6□□□□□ -0.55
H3F3B-207ENST00000589417 CRPP02741 224 aa11.6□□□□□ -0.55
H3F3B-207ENST00000589417 AMTP48728 403 aa11.6□□□□□ -0.55
H3F3B-207ENST00000589417 WFDC2Q14508 124 aa11.6□□□□□ -0.55
H3F3B-207ENST00000589417 FAM104BQ5XKR9 115 aa11.6□□□□□ -0.55
H3F3B-207ENST00000589417 UQCC3Q6UW78 93 aa11.6□□□□□ -0.55
H3F3B-207ENST00000589417 C20orf203Q8NBC4 194 aa11.6□□□□□ -0.55
H3F3B-207ENST00000589417 TMEM70Q9BUB7 260 aa11.6□□□□□ -0.55
H3F3B-207ENST00000589417 TRBV27A0A0K0K1C4 114 aa11.59□□□□□ -0.55
H3F3B-207ENST00000589417 A0A1B0GXF2 115 aa11.59□□□□□ -0.55
H3F3B-207ENST00000589417 I3L3M4 83 aa11.59□□□□□ -0.55
H3F3B-207ENST00000589417 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
H3F3B-207ENST00000589417 C1orf43Q9BWL3 253 aa11.59□□□□□ -0.55
H3F3B-207ENST00000589417 ST20Q9HBF5 79 aa11.59□□□□□ -0.55
H3F3B-207ENST00000589417 LINC00862A6NCI5 91 aa11.58□□□□□ -0.56
H3F3B-207ENST00000589417 S100A8P05109 93 aa11.58□□□□□ -0.56
H3F3B-207ENST00000589417 FUSP35637 526 aaKnown RBP eCLIP11.58□□□□□ -0.561e-7■■■■□ 26
H3F3B-207ENST00000589417 RPS10P46783 165 aaKnown RBP11.58□□□□□ -0.56
H3F3B-207ENST00000589417 BAALCQ8WXS3 180 aa11.58□□□□□ -0.56
H3F3B-207ENST00000589417 ANAPC16Q96DE5 110 aa11.58□□□□□ -0.56
H3F3B-207ENST00000589417 IGLV4-60A0A075B6I1 120 aa11.57□□□□□ -0.56
H3F3B-207ENST00000589417 GCSHP23434 173 aa11.57□□□□□ -0.56
H3F3B-207ENST00000589417 KRTAP26-1Q6PEX3 210 aa11.57□□□□□ -0.56
H3F3B-207ENST00000589417 ATP5L2Q7Z4Y8 100 aa11.57□□□□□ -0.56
H3F3B-207ENST00000589417 NRACQ8N912 160 aa11.57□□□□□ -0.56
H3F3B-207ENST00000589417 TRBV24-1A0A075B6N3 115 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 IGLV5-52A0A0A0MRZ9 124 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 TRAV8-4A0A0B4J246 113 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 UBE2L6O14933 153 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 MT-ND4LP03901 98 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 ESDP10768 282 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 PMCHP20382 165 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 CAMPP49913 170 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 KRTAP10-1P60331 282 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 HBBP68871 147 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 REG3AQ06141 175 aa11.56□□□□□ -0.56
H3F3B-207ENST00000589417 MRPL51Q4U2R6 128 aaKnown RBP11.56□□□□□ -0.56
H3F3B-207ENST00000589417 TMEM218A2RU14 115 aa11.55□□□□□ -0.56
H3F3B-207ENST00000589417 TSHBP01222 138 aa11.55□□□□□ -0.56
H3F3B-207ENST00000589417 APCSP02743 223 aa11.55□□□□□ -0.56
H3F3B-207ENST00000589417 DEFB104AQ8WTQ1 72 aa11.55□□□□□ -0.56
H3F3B-207ENST00000589417 F8W036 122 aa11.54□□□□□ -0.56
H3F3B-207ENST00000589417 VCYO14598 125 aa11.54□□□□□ -0.56
H3F3B-207ENST00000589417 RPL32P62910 135 aaKnown RBP11.54□□□□□ -0.56
H3F3B-207ENST00000589417 LECT2O14960 151 aa11.53□□□□□ -0.56
H3F3B-207ENST00000589417 ZNF25P17030 456 aaPredicted RBP11.53□□□□□ -0.56
H3F3B-207ENST00000589417 SUMO2P61956 95 aaKnown RBP11.53□□□□□ -0.56
H3F3B-207ENST00000589417 C20orf78Q9BR46 151 aa11.53□□□□□ -0.56
H3F3B-207ENST00000589417 SMKR1H3BMG3 65 aa11.52□□□□□ -0.57
H3F3B-207ENST00000589417 ADCYAP1P18509 176 aa11.52□□□□□ -0.57
H3F3B-207ENST00000589417 XGP55808 180 aa11.52□□□□□ -0.57
H3F3B-207ENST00000589417 C14orf177Q52M58 125 aa11.52□□□□□ -0.57
H3F3B-207ENST00000589417 MRPL54Q6P161 138 aaKnown RBP11.52□□□□□ -0.57
H3F3B-207ENST00000589417 DNAH8Q96JB1 4490 aa11.51□□□□□ -0.57
H3F3B-207ENST00000589417 PPBPP02775 128 aa11.51□□□□□ -0.57
H3F3B-207ENST00000589417 FGF6P10767 208 aa11.51□□□□□ -0.57
H3F3B-207ENST00000589417 MRPL52Q86TS9 123 aaKnown RBP11.51□□□□□ -0.57
H3F3B-207ENST00000589417 IMMP2LQ96T52 175 aa11.51□□□□□ -0.57
H3F3B-207ENST00000589417 SEC11CQ9BY50 192 aa11.51□□□□□ -0.57
H3F3B-207ENST00000589417 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
H3F3B-207ENST00000589417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.5□□□□□ -0.57
H3F3B-207ENST00000589417 IGKV2-29A2NJV5 120 aaPredicted RBP11.5□□□□□ -0.57
H3F3B-207ENST00000589417 PHOX2AO14813 284 aa11.5□□□□□ -0.57
H3F3B-207ENST00000589417 CKS2P33552 79 aa11.5□□□□□ -0.57
H3F3B-207ENST00000589417 CLPSL2Q6UWE3 100 aa11.5□□□□□ -0.57
H3F3B-207ENST00000589417 KRTAP17-1Q9BYP8 105 aa11.5□□□□□ -0.57
H3F3B-207ENST00000589417 AMMECR1LQ6DCA0 310 aa11.49□□□□□ -0.57
H3F3B-207ENST00000589417 TNFRSF6BO95407 300 aa11.48□□□□□ -0.57
H3F3B-207ENST00000589417 Q8N1X5 172 aa11.48□□□□□ -0.57
H3F3B-207ENST00000589417 KIR2DL4Q99706 377 aa11.48□□□□□ -0.57
H3F3B-207ENST00000589417 CTDSP1Q9GZU7 261 aa11.48□□□□□ -0.57
H3F3B-207ENST00000589417 CSDC2Q9Y534 153 aaKnown RBP11.48□□□□□ -0.57
H3F3B-207ENST00000589417 C7orf77A4D0Y5 90 aa11.47□□□□□ -0.57
H3F3B-207ENST00000589417 D6R8Y8 96 aa11.47□□□□□ -0.57
H3F3B-207ENST00000589417 USP17L23D6RBM5 183 aa11.47□□□□□ -0.57
H3F3B-207ENST00000589417 TCAPO15273 167 aa11.47□□□□□ -0.57
H3F3B-207ENST00000589417 C10orf91Q5T1B1 145 aa11.47□□□□□ -0.57
H3F3B-207ENST00000589417 RNASEKQ6P5S7 137 aaKnown RBP11.47□□□□□ -0.57
H3F3B-207ENST00000589417 BTF3L4Q96K17 158 aa11.47□□□□□ -0.57
H3F3B-207ENST00000589417 IGLV10-54A0A075B6I4 117 aa11.46□□□□□ -0.57
H3F3B-207ENST00000589417 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.46□□□□□ -0.57
H3F3B-207ENST00000589417 PRSS47A8MTI9 375 aa11.46□□□□□ -0.57
H3F3B-207ENST00000589417 HLA-DQA1P01909 254 aa11.46□□□□□ -0.57
H3F3B-207ENST00000589417 Q6ZSA8 131 aa11.46□□□□□ -0.57
H3F3B-207ENST00000589417 COMMD7Q86VX2 200 aa11.46□□□□□ -0.57
H3F3B-207ENST00000589417 CLRN3Q8NCR9 226 aa11.46□□□□□ -0.57
H3F3B-207ENST00000589417 OR5A1Q8NGJ0 315 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms