RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 KRTAP26-1Q6PEX3 210 aa9.49□□□□□ -0.89
DNMT1-217ENST00000589091 C9orf163Q8N9P6 203 aa9.49□□□□□ -0.89
DNMT1-217ENST00000589091 KRTAP29-1A8MX34 341 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-217ENST00000589091 BLOC1S1P78537 153 aa9.48□□□□□ -0.89
DNMT1-217ENST00000589091 TWIST1Q15672 202 aa9.48□□□□□ -0.89
DNMT1-217ENST00000589091 C20orf203Q8NBC4 194 aa9.48□□□□□ -0.89
DNMT1-217ENST00000589091 TMEM250H0YL14 139 aa9.47□□□□□ -0.89
DNMT1-217ENST00000589091 AMTP48728 403 aa9.47□□□□□ -0.89
DNMT1-217ENST00000589091 SMIM15Q7Z3B0 74 aa9.47□□□□□ -0.89
DNMT1-217ENST00000589091 OCC1Q8TAD7 63 aa9.47□□□□□ -0.89
DNMT1-217ENST00000589091 RNASE7Q9H1E1 156 aaKnown RBP9.47□□□□□ -0.89
DNMT1-217ENST00000589091 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.9
DNMT1-217ENST00000589091 Q6ZNX1 250 aa9.46□□□□□ -0.9
DNMT1-217ENST00000589091 AKAP14Q86UN6 197 aa9.46□□□□□ -0.9
DNMT1-217ENST00000589091 MYCBP2O75592 4640 aa9.45□□□□□ -0.9
DNMT1-217ENST00000589091 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
DNMT1-217ENST00000589091 K7EN84 100 aa9.45□□□□□ -0.9
DNMT1-217ENST00000589091 TEX261Q6UWH6 196 aa9.45□□□□□ -0.9
DNMT1-217ENST00000589091 A8MWL6 223 aa9.44□□□□□ -0.9
DNMT1-217ENST00000589091 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
DNMT1-217ENST00000589091 NCR2O95944 276 aa9.44□□□□□ -0.9
DNMT1-217ENST00000589091 CNBPP62633 177 aaKnown RBP9.44□□□□□ -0.9
DNMT1-217ENST00000589091 FAM231DQ6ZW35 169 aa9.44□□□□□ -0.9
DNMT1-217ENST00000589091 GATD1Q8NB37 220 aa9.44□□□□□ -0.9
DNMT1-217ENST00000589091 AP5S1Q9NUS5 200 aa9.44□□□□□ -0.9
DNMT1-217ENST00000589091 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-217ENST00000589091 hDV102S1A0JD36 115 aa9.43□□□□□ -0.9
DNMT1-217ENST00000589091 KRTAP10-4P60372 401 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-217ENST00000589091 ALKAL2Q6UX46 152 aa9.43□□□□□ -0.9
DNMT1-217ENST00000589091 LYPD6BQ8NI32 183 aa9.43□□□□□ -0.9
DNMT1-217ENST00000589091 H7C423 109 aa9.42□□□□□ -0.9
DNMT1-217ENST00000589091 NDUFS6O75380 124 aaKnown RBP9.42□□□□□ -0.9
DNMT1-217ENST00000589091 CT83Q5H943 113 aa9.42□□□□□ -0.9
DNMT1-217ENST00000589091 GTSF1Q8WW33 167 aa9.42□□□□□ -0.9
DNMT1-217ENST00000589091 BORCS7Q96B45 105 aa9.42□□□□□ -0.9
DNMT1-217ENST00000589091 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
DNMT1-217ENST00000589091 TRAV26-2A0A0B4J265 109 aa9.41□□□□□ -0.9
DNMT1-217ENST00000589091 APCSP02743 223 aa9.41□□□□□ -0.9
DNMT1-217ENST00000589091 RPL37AP61513 92 aaKnown RBP9.41□□□□□ -0.9
DNMT1-217ENST00000589091 AMMECR1LQ6DCA0 310 aa9.41□□□□□ -0.9
DNMT1-217ENST00000589091 CFAP161Q6P656 301 aa9.41□□□□□ -0.9
DNMT1-217ENST00000589091 SDIM1Q6ZPB5 146 aa9.41□□□□□ -0.9
DNMT1-217ENST00000589091 HERC1Q15751 4861 aa9.41□□□□□ -0.9
DNMT1-217ENST00000589091 IGHV3-64A0A075B6Q5 118 aa9.4□□□□□ -0.9
DNMT1-217ENST00000589091 OXTP01178 125 aa9.4□□□□□ -0.9
DNMT1-217ENST00000589091 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-217ENST00000589091 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-217ENST00000589091 RPL39LQ96EH5 51 aaKnown RBP9.4□□□□□ -0.9
DNMT1-217ENST00000589091 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-217ENST00000589091 SDHAF1A6NFY7 115 aa9.39□□□□□ -0.91
DNMT1-217ENST00000589091 CIRBPQ14011 172 aaKnown RBP9.39□□□□□ -0.91
DNMT1-217ENST00000589091 FAM210AQ96ND0 272 aa9.39□□□□□ -0.91
DNMT1-217ENST00000589091 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
DNMT1-217ENST00000589091 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
DNMT1-217ENST00000589091 ZNF25P17030 456 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-217ENST00000589091 CEBPGP53567 150 aa9.38□□□□□ -0.91
DNMT1-217ENST00000589091 RNASEKQ6P5S7 137 aaKnown RBP9.38□□□□□ -0.91
DNMT1-217ENST00000589091 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
DNMT1-217ENST00000589091 SMIM7Q9BQ49 75 aa9.38□□□□□ -0.91
DNMT1-217ENST00000589091 EIF5A2Q9GZV4 153 aaKnown RBP9.38□□□□□ -0.91
DNMT1-217ENST00000589091 IGKV3OR2-268A0A0C4DH90 116 aa9.37□□□□□ -0.91
DNMT1-217ENST00000589091 FAM231BA6NCW3 169 aa9.37□□□□□ -0.91
DNMT1-217ENST00000589091 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
DNMT1-217ENST00000589091 I3L3M4 83 aa9.37□□□□□ -0.91
DNMT1-217ENST00000589091 FGF6P10767 208 aa9.37□□□□□ -0.91
DNMT1-217ENST00000589091 PMCHP20382 165 aa9.37□□□□□ -0.91
DNMT1-217ENST00000589091 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-217ENST00000589091 A0A1B0GUT8 65 aa9.36□□□□□ -0.91
DNMT1-217ENST00000589091 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-217ENST00000589091 LINC01551Q86U37 167 aa9.36□□□□□ -0.91
DNMT1-217ENST00000589091 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
DNMT1-217ENST00000589091 TSKUQ8WUA8 353 aa9.36□□□□□ -0.91
DNMT1-217ENST00000589091 BTF3L4Q96K17 158 aa9.36□□□□□ -0.91
DNMT1-217ENST00000589091 TMEM191AQ9H0A3 160 aa9.36□□□□□ -0.91
DNMT1-217ENST00000589091 ZNF727A8MUV8 499 aa9.35□□□□□ -0.91
DNMT1-217ENST00000589091 HIGD1CA8MV81 97 aa9.35□□□□□ -0.91
DNMT1-217ENST00000589091 PANO1I0J062 215 aa9.35□□□□□ -0.91
DNMT1-217ENST00000589091 OR5A1Q8NGJ0 315 aa9.35□□□□□ -0.91
DNMT1-217ENST00000589091 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-217ENST00000589091 TMEM101Q96IK0 257 aa9.35□□□□□ -0.91
DNMT1-217ENST00000589091 ST20Q9HBF5 79 aa9.35□□□□□ -0.91
DNMT1-217ENST00000589091 OSTCQ9NRP0 149 aa9.35□□□□□ -0.91
DNMT1-217ENST00000589091 SLPIP03973 132 aa9.34□□□□□ -0.91
DNMT1-217ENST00000589091 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
DNMT1-217ENST00000589091 SERTAD4-AS1Q5TG53 156 aa9.34□□□□□ -0.91
DNMT1-217ENST00000589091 DPH3Q96FX2 82 aa9.34□□□□□ -0.91
DNMT1-217ENST00000589091 MRAP2Q96G30 205 aa9.34□□□□□ -0.91
DNMT1-217ENST00000589091 SPACA4Q8TDM5 124 aa9.33□□□□□ -0.92
DNMT1-217ENST00000589091 A0A087WYN8 130 aa9.32□□□□□ -0.92
DNMT1-217ENST00000589091 GVQW2A0A096LPI5 108 aaPredicted RBP9.32□□□□□ -0.92
DNMT1-217ENST00000589091 SRP19P09132 144 aaKnown RBP9.32□□□□□ -0.92
DNMT1-217ENST00000589091 ESDP10768 282 aa9.32□□□□□ -0.92
DNMT1-217ENST00000589091 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
DNMT1-217ENST00000589091 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
DNMT1-217ENST00000589091 TRBV27A0A0K0K1C4 114 aa9.31□□□□□ -0.92
DNMT1-217ENST00000589091 A6NJY4 79 aa9.31□□□□□ -0.92
DNMT1-217ENST00000589091 PPP1R17O96001 155 aa9.31□□□□□ -0.92
DNMT1-217ENST00000589091 TSHBP01222 138 aa9.31□□□□□ -0.92
DNMT1-217ENST00000589091 RAB4AP20338 218 aa9.31□□□□□ -0.92
DNMT1-217ENST00000589091 POLR2KP53803 58 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms