RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 TM2D2Q9BX73 214 aa11.05□□□□□ -0.64
MBD1-217ENST00000588937 VCX2Q9H322 139 aa11.05□□□□□ -0.64
MBD1-217ENST00000588937 C9orf118A6NHY6 69 aa11.04□□□□□ -0.64
MBD1-217ENST00000588937 CCL25O15444 150 aa11.04□□□□□ -0.64
MBD1-217ENST00000588937 SMIM13P0DJ93 91 aa11.04□□□□□ -0.64
MBD1-217ENST00000588937 OR4C5Q8NGB2 326 aa11.04□□□□□ -0.64
MBD1-217ENST00000588937 TRGV1A0A0A0MS02 117 aa11.03□□□□□ -0.64
MBD1-217ENST00000588937 PF4P02776 101 aa11.03□□□□□ -0.64
MBD1-217ENST00000588937 Q6ZSN1 163 aa11.03□□□□□ -0.64
MBD1-217ENST00000588937 IGLV4-3A0A075B6K6 122 aa11.03□□□□□ -0.64
MBD1-217ENST00000588937 TMEM170BQ5T4T1 132 aa11.03□□□□□ -0.64
MBD1-217ENST00000588937 HIST1H4GQ99525 98 aa11.03□□□□□ -0.64
MBD1-217ENST00000588937 C19orf73Q9NVV2 129 aa11.03□□□□□ -0.64
MBD1-217ENST00000588937 NACAE9PAV3 2078 aa11.03□□□□□ -0.64
MBD1-217ENST00000588937 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
MBD1-217ENST00000588937 EMP1P54849 157 aa11.02□□□□□ -0.65
MBD1-217ENST00000588937 AMMECR1LQ6DCA0 310 aa11.02□□□□□ -0.65
MBD1-217ENST00000588937 C16orf74Q96GX8 76 aa11.02□□□□□ -0.65
MBD1-217ENST00000588937 FXYD2P54710 66 aa11.01□□□□□ -0.65
MBD1-217ENST00000588937 COTL1Q14019 142 aa11.01□□□□□ -0.65
MBD1-217ENST00000588937 ZNRF2Q8NHG8 242 aa11.01□□□□□ -0.65
MBD1-217ENST00000588937 SPANXA1Q9NS26 97 aa11.01□□□□□ -0.65
MBD1-217ENST00000588937 C2CD3Q4AC94 2353 aa11.01□□□□□ -0.65
MBD1-217ENST00000588937 TRAV4A0A0B4J268 109 aa11□□□□□ -0.65
MBD1-217ENST00000588937 DAZ2Q13117 558 aaKnown RBP11□□□□□ -0.65
MBD1-217ENST00000588937 TRBV10-1A0A0K0K1A3 114 aa11□□□□□ -0.65
MBD1-217ENST00000588937 GIG44P09565 113 aaPredicted RBP11□□□□□ -0.65
MBD1-217ENST00000588937 RPL35AP18077 110 aaKnown RBP11□□□□□ -0.65
MBD1-217ENST00000588937 SCGB1D4Q6XE38 83 aa11□□□□□ -0.65
MBD1-217ENST00000588937 AMELXQ99217 191 aa11□□□□□ -0.65
MBD1-217ENST00000588937 OPRPNQ99935 248 aaPredicted RBP11□□□□□ -0.65
MBD1-217ENST00000588937 CIDEAO60543 219 aa10.99□□□□□ -0.65
MBD1-217ENST00000588937 KRTAP10-3P60369 221 aa10.99□□□□□ -0.65
MBD1-217ENST00000588937 GTF2H5Q6ZYL4 71 aa10.99□□□□□ -0.65
MBD1-217ENST00000588937 LINC00482Q8N8I6 264 aa10.99□□□□□ -0.65
MBD1-217ENST00000588937 CHCHD7Q9BUK0 85 aa10.99□□□□□ -0.65
MBD1-217ENST00000588937 SETD2Q9BYW2 2564 aaPredicted RBP10.99□□□□□ -0.65
MBD1-217ENST00000588937 TRBV7-3A0A075B6L6 115 aa10.98□□□□□ -0.65
MBD1-217ENST00000588937 H3BUT2 72 aa10.98□□□□□ -0.65
MBD1-217ENST00000588937 RAB37Q96AX2 223 aa10.98□□□□□ -0.65
MBD1-217ENST00000588937 RPL36AP83881 106 aaKnown RBP10.98□□□□□ -0.65
MBD1-217ENST00000588937 RPL36ALQ969Q0 106 aaKnown RBP10.98□□□□□ -0.65
MBD1-217ENST00000588937 WFDC10AQ9H1F0 79 aa10.98□□□□□ -0.65
MBD1-217ENST00000588937 WNK1Q9H4A3 2382 aa10.97□□□□□ -0.65
MBD1-217ENST00000588937 NIPBLQ6KC79 2804 aaeCLIP10.97□□□□□ -0.65
MBD1-217ENST00000588937 TMEM223A0PJW6 202 aa10.97□□□□□ -0.65
MBD1-217ENST00000588937 GAGE10A6NGK3 116 aa10.97□□□□□ -0.65
MBD1-217ENST00000588937 K7EQD1 137 aa10.97□□□□□ -0.65
MBD1-217ENST00000588937 LGALS3P17931 250 aaKnown RBP10.97□□□□□ -0.65
MBD1-217ENST00000588937 INSL3P51460 131 aa10.97□□□□□ -0.65
MBD1-217ENST00000588937 RRN3P1Q2M238 152 aa10.97□□□□□ -0.65
MBD1-217ENST00000588937 Q6ZTI0 123 aa10.97□□□□□ -0.65
MBD1-217ENST00000588937 NOP10Q9NPE3 64 aaKnown RBP10.97□□□□□ -0.65
MBD1-217ENST00000588937 NHP2Q9NX24 153 aaKnown RBP10.97□□□□□ -0.65
MBD1-217ENST00000588937 Q9UF83 564 aa10.97□□□□□ -0.65
MBD1-217ENST00000588937 UBE2D4Q9Y2X8 147 aa10.97□□□□□ -0.65
MBD1-217ENST00000588937 LEPROTO15243 131 aa10.96□□□□□ -0.65
MBD1-217ENST00000588937 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.65
MBD1-217ENST00000588937 PHLDA1Q8WV24 401 aaPredicted RBP10.96□□□□□ -0.65
MBD1-217ENST00000588937 ZNF479Q96JC4 524 aa10.96□□□□□ -0.65
MBD1-217ENST00000588937 A0A0J9YXV3 536 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 TMEM238LA0A1B0GVL6 79 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 A6NJY4 79 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 J3QQQ9 107 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 K7EP13 123 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
MBD1-217ENST00000588937 MRPS36P82909 103 aaKnown RBP10.95□□□□□ -0.66
MBD1-217ENST00000588937 DAZ4Q86SG3 579 aaKnown RBP10.95□□□□□ -0.66
MBD1-217ENST00000588937 OVOL2Q9BRP0 275 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 DAZ3Q9NR90 486 aaKnown RBP10.95□□□□□ -0.66
MBD1-217ENST00000588937 IGHV3-38A0A0C4DH36 116 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 A0A1W2PPM0 123 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 PLEKHB2Q96CS7 222 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
MBD1-217ENST00000588937 FABP2P12104 132 aa10.94□□□□□ -0.66
MBD1-217ENST00000588937 SMAGPQ0VAQ4 97 aa10.94□□□□□ -0.66
MBD1-217ENST00000588937 SRSF9Q13242 221 aaKnown RBP eCLIP10.94□□□□□ -0.66
MBD1-217ENST00000588937 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
MBD1-217ENST00000588937 PLAC8L1A1L4L8 177 aa10.93□□□□□ -0.66
MBD1-217ENST00000588937 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
MBD1-217ENST00000588937 C12orf74Q32Q52 190 aa10.93□□□□□ -0.66
MBD1-217ENST00000588937 C9orf66Q5T8R8 295 aa10.93□□□□□ -0.66
MBD1-217ENST00000588937 FAM104AQ969W3 186 aa10.93□□□□□ -0.66
MBD1-217ENST00000588937 SPANXB1Q9NS25 103 aaPredicted RBP10.93□□□□□ -0.66
MBD1-217ENST00000588937 TRGV2A0A075B6R0 118 aa10.93□□□□□ -0.66
MBD1-217ENST00000588937 A0A0J9YY99 117 aa10.93□□□□□ -0.66
MBD1-217ENST00000588937 TINCRA0A1B0GVN0 87 aa10.93□□□□□ -0.66
MBD1-217ENST00000588937 K7EP34 96 aa10.93□□□□□ -0.66
MBD1-217ENST00000588937 TSPEAR-AS2P59090 65 aa10.92□□□□□ -0.66
MBD1-217ENST00000588937 DGAT2L7PQ6IED9 249 aa10.92□□□□□ -0.66
MBD1-217ENST00000588937 CEMP1Q6PRD7 247 aaPredicted RBP10.92□□□□□ -0.66
MBD1-217ENST00000588937 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
MBD1-217ENST00000588937 A0A1B0GWB2 263 aa10.91□□□□□ -0.66
MBD1-217ENST00000588937 GAGE12BA1L429 117 aa10.91□□□□□ -0.66
MBD1-217ENST00000588937 K7ERJ3 54 aa10.91□□□□□ -0.66
MBD1-217ENST00000588937 GAGE7O76087 117 aa10.91□□□□□ -0.66
MBD1-217ENST00000588937 GAGE12FP0CL80 117 aa10.91□□□□□ -0.66
MBD1-217ENST00000588937 GAGE12GP0CL81 117 aa10.91□□□□□ -0.66
MBD1-217ENST00000588937 GAGE12IP0CL82 117 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 319.2 ms