RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 IGHV3-30-5P0DP03 117 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 PMCHP20382 165 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 COX19Q49B96 90 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 NIT1Q86X76 327 aa12.88□□□□□ -0.35
CLPTM1-209ENST00000588855 APCSP02743 223 aa12.87□□□□□ -0.35
CLPTM1-209ENST00000588855 CHCHD5Q9BSY4 110 aa12.87□□□□□ -0.35
CLPTM1-209ENST00000588855 SMCO4Q9NRQ5 59 aa12.87□□□□□ -0.35
CLPTM1-209ENST00000588855 PHOX2AO14813 284 aa12.86□□□□□ -0.35
CLPTM1-209ENST00000588855 AMTP48728 403 aa12.86□□□□□ -0.35
CLPTM1-209ENST00000588855 KIAA1644Q3SXP7 199 aa12.86□□□□□ -0.35
CLPTM1-209ENST00000588855 C20orf78Q9BR46 151 aa12.86□□□□□ -0.35
CLPTM1-209ENST00000588855 TSHBP01222 138 aa12.85□□□□□ -0.35
CLPTM1-209ENST00000588855 TMEM243Q9BU79 118 aa12.85□□□□□ -0.35
CLPTM1-209ENST00000588855 DNAH17Q9UFH2 4485 aa12.84□□□□□ -0.35
CLPTM1-209ENST00000588855 VCYO14598 125 aa12.84□□□□□ -0.35
CLPTM1-209ENST00000588855 MT-ND6P03923 174 aa12.84□□□□□ -0.35
CLPTM1-209ENST00000588855 GAGE6Q13070 117 aa12.84□□□□□ -0.35
CLPTM1-209ENST00000588855 MRPL18Q9H0U6 180 aaKnown RBP12.84□□□□□ -0.35
CLPTM1-209ENST00000588855 TMEM262E9PQX1 116 aa12.83□□□□□ -0.35
CLPTM1-209ENST00000588855 MPV17L2Q567V2 206 aa12.83□□□□□ -0.35
CLPTM1-209ENST00000588855 SMIM2Q9BVW6 85 aa12.83□□□□□ -0.35
CLPTM1-209ENST00000588855 LAMTOR2Q9Y2Q5 125 aa12.83□□□□□ -0.35
CLPTM1-209ENST00000588855 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
CLPTM1-209ENST00000588855 A0A087WX48 190 aa12.83□□□□□ -0.36
CLPTM1-209ENST00000588855 RPL32P62910 135 aaKnown RBP12.83□□□□□ -0.36
CLPTM1-209ENST00000588855 K7EP13 123 aa12.82□□□□□ -0.36
CLPTM1-209ENST00000588855 FABP9Q0Z7S8 132 aa12.82□□□□□ -0.36
CLPTM1-209ENST00000588855 C10orf126Q8N4M7 172 aa12.82□□□□□ -0.36
CLPTM1-209ENST00000588855 CHCHD7Q9BUK0 85 aa12.82□□□□□ -0.36
CLPTM1-209ENST00000588855 FAT2Q9NYQ8 4349 aa12.81□□□□□ -0.36
CLPTM1-209ENST00000588855 KIR2DL4Q99706 377 aa12.81□□□□□ -0.36
CLPTM1-209ENST00000588855 MAP1LC3AQ9H492 121 aa12.81□□□□□ -0.36
CLPTM1-209ENST00000588855 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 LOC389332A0A1B0GUA5 103 aa12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 IGKV2-29A2NJV5 120 aaPredicted RBP12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 UBE2L6O14933 153 aa12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 SCO1O75880 301 aa12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 FCER1GP30273 86 aa12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 PKIAP61925 76 aa12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 C1orf134Q5TEV5 83 aa12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 C6orf223Q8N319 242 aa12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 Q8N976 141 aa12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 TRAPPC1Q9Y5R8 145 aa12.8□□□□□ -0.36
CLPTM1-209ENST00000588855 ESDP10768 282 aa12.79□□□□□ -0.36
CLPTM1-209ENST00000588855 PRSS47A8MTI9 375 aa12.78□□□□□ -0.36
CLPTM1-209ENST00000588855 IBA57-AS1B1ANH7 110 aa12.78□□□□□ -0.36
CLPTM1-209ENST00000588855 ATP6V1G1O75348 118 aa12.78□□□□□ -0.36
CLPTM1-209ENST00000588855 RBX1P62877 108 aa12.78□□□□□ -0.36
CLPTM1-209ENST00000588855 ALKBH7Q9BT30 221 aaPredicted RBP12.78□□□□□ -0.36
CLPTM1-209ENST00000588855 RTL8CO15255 209 aa12.78□□□□□ -0.36
CLPTM1-209ENST00000588855 TCAPO15273 167 aa12.78□□□□□ -0.36
CLPTM1-209ENST00000588855 KLK12Q9UKR0 248 aa12.78□□□□□ -0.36
CLPTM1-209ENST00000588855 LAGE3Q14657 143 aa12.76□□□□□ -0.37
CLPTM1-209ENST00000588855 Q9HAA7 133 aa12.76□□□□□ -0.37
CLPTM1-209ENST00000588855 IGLV4-60A0A075B6I1 120 aa12.75□□□□□ -0.37
CLPTM1-209ENST00000588855 ANGP03950 147 aaKnown RBP12.75□□□□□ -0.37
CLPTM1-209ENST00000588855 Q8N8P6 123 aa12.75□□□□□ -0.37
CLPTM1-209ENST00000588855 A0A1B0GUV1 79 aa12.74□□□□□ -0.37
CLPTM1-209ENST00000588855 H7C423 109 aa12.74□□□□□ -0.37
CLPTM1-209ENST00000588855 FGF6P10767 208 aa12.74□□□□□ -0.37
CLPTM1-209ENST00000588855 BTF3P20290 206 aaKnown RBP12.74□□□□□ -0.37
CLPTM1-209ENST00000588855 C20orf203Q8NBC4 194 aa12.74□□□□□ -0.37
CLPTM1-209ENST00000588855 COLCA2A8K830 154 aa12.73□□□□□ -0.37
CLPTM1-209ENST00000588855 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
CLPTM1-209ENST00000588855 AMMECR1LQ6DCA0 310 aa12.73□□□□□ -0.37
CLPTM1-209ENST00000588855 RNASEKQ6P5S7 137 aaKnown RBP12.73□□□□□ -0.37
CLPTM1-209ENST00000588855 Q6ZRN7 208 aaPredicted RBP12.73□□□□□ -0.37
CLPTM1-209ENST00000588855 RAB5AP20339 215 aa12.72□□□□□ -0.37
CLPTM1-209ENST00000588855 S100A1P23297 94 aa12.72□□□□□ -0.37
CLPTM1-209ENST00000588855 CLPSL2Q6UWE3 100 aa12.72□□□□□ -0.37
CLPTM1-209ENST00000588855 UBE2WQ96B02 151 aa12.72□□□□□ -0.37
CLPTM1-209ENST00000588855 NXT2Q9NPJ8 142 aaKnown RBP12.72□□□□□ -0.37
CLPTM1-209ENST00000588855 CRPP02741 224 aa12.71□□□□□ -0.38
CLPTM1-209ENST00000588855 RPL39P62891 51 aaKnown RBP12.71□□□□□ -0.38
CLPTM1-209ENST00000588855 ENHOQ6UWT2 76 aa12.71□□□□□ -0.38
CLPTM1-209ENST00000588855 NFE4Q86UQ8 179 aa12.71□□□□□ -0.38
CLPTM1-209ENST00000588855 LINC00269Q8N2A0 174 aa12.71□□□□□ -0.38
CLPTM1-209ENST00000588855 DNAH11Q96DT5 4516 aa12.7□□□□□ -0.38
CLPTM1-209ENST00000588855 TRAV8-3A0A0A6YYJ7 113 aa12.7□□□□□ -0.38
CLPTM1-209ENST00000588855 ZNF25P17030 456 aaPredicted RBP12.7□□□□□ -0.38
CLPTM1-209ENST00000588855 MRPL52Q86TS9 123 aaKnown RBP12.7□□□□□ -0.38
CLPTM1-209ENST00000588855 PRR34Q9NV39 138 aa12.7□□□□□ -0.38
CLPTM1-209ENST00000588855 HECTD4Q9Y4D8 3996 aa12.7□□□□□ -0.38
CLPTM1-209ENST00000588855 PRSS3P2Q8NHM4 247 aa12.69□□□□□ -0.38
CLPTM1-209ENST00000588855 C18orf32Q8TCD1 76 aa12.69□□□□□ -0.38
CLPTM1-209ENST00000588855 UBE2D4Q9Y2X8 147 aa12.69□□□□□ -0.38
CLPTM1-209ENST00000588855 PKD1P98161 4303 aa12.69□□□□□ -0.38
CLPTM1-209ENST00000588855 TMEM18Q96B42 140 aa12.68□□□□□ -0.38
CLPTM1-209ENST00000588855 TMEM101Q96IK0 257 aa12.68□□□□□ -0.38
CLPTM1-209ENST00000588855 TRGC2P03986 189 aa12.67□□□□□ -0.38
CLPTM1-209ENST00000588855 REG3AQ06141 175 aa12.67□□□□□ -0.38
CLPTM1-209ENST00000588855 Q0VG73 95 aa12.67□□□□□ -0.38
CLPTM1-209ENST00000588855 LINC00336Q6ZUF6 198 aa12.67□□□□□ -0.38
CLPTM1-209ENST00000588855 OR5A1Q8NGJ0 315 aa12.67□□□□□ -0.38
CLPTM1-209ENST00000588855 PRSS29PA6NIE9 313 aa12.67□□□□□ -0.38
CLPTM1-209ENST00000588855 K7EMI3 77 aa12.67□□□□□ -0.38
CLPTM1-209ENST00000588855 TNP2Q05952 138 aa12.67□□□□□ -0.38
CLPTM1-209ENST00000588855 ORMDL2Q53FV1 153 aa12.67□□□□□ -0.38
CLPTM1-209ENST00000588855 EPPK1P58107 5090 aaKnown RBP12.66□□□□□ -0.38
CLPTM1-209ENST00000588855 IGKV2D-24A0A075B6R9 120 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms