RNA–Protein interactions for RNA: ENST00000588564.1

RUNDC3A-204, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-204ENST00000588564 TSHBP01222 138 aa9.36□□□□□ -0.91
RUNDC3A-204ENST00000588564 KIAA1644Q3SXP7 199 aa9.36□□□□□ -0.91
RUNDC3A-204ENST00000588564 PRELID3AQ96N28 172 aa9.36□□□□□ -0.91
RUNDC3A-204ENST00000588564 C20orf78Q9BR46 151 aa9.36□□□□□ -0.91
RUNDC3A-204ENST00000588564 VCYO14598 125 aa9.35□□□□□ -0.91
RUNDC3A-204ENST00000588564 PHOX2AO14813 284 aa9.35□□□□□ -0.91
RUNDC3A-204ENST00000588564 HLA-DQA1P01909 254 aa9.35□□□□□ -0.91
RUNDC3A-204ENST00000588564 APCSP02743 223 aa9.35□□□□□ -0.91
RUNDC3A-204ENST00000588564 COX19Q49B96 90 aa9.35□□□□□ -0.91
RUNDC3A-204ENST00000588564 TTC32Q5I0X7 151 aa9.35□□□□□ -0.91
RUNDC3A-204ENST00000588564 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
RUNDC3A-204ENST00000588564 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
RUNDC3A-204ENST00000588564 SMCO4Q9NRQ5 59 aa9.35□□□□□ -0.91
RUNDC3A-204ENST00000588564 DNAH17Q9UFH2 4485 aa9.34□□□□□ -0.91
RUNDC3A-204ENST00000588564 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
RUNDC3A-204ENST00000588564 PRSS47A8MTI9 375 aa9.34□□□□□ -0.91
RUNDC3A-204ENST00000588564 AMTP48728 403 aa9.34□□□□□ -0.91
RUNDC3A-204ENST00000588564 RPL32P62910 135 aaKnown RBP9.34□□□□□ -0.91
RUNDC3A-204ENST00000588564 GAGE6Q13070 117 aa9.34□□□□□ -0.91
RUNDC3A-204ENST00000588564 TMEM243Q9BU79 118 aa9.34□□□□□ -0.91
RUNDC3A-204ENST00000588564 MRPL18Q9H0U6 180 aaKnown RBP9.34□□□□□ -0.91
RUNDC3A-204ENST00000588564 IBA57-AS1B1ANH7 110 aa9.33□□□□□ -0.92
RUNDC3A-204ENST00000588564 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
RUNDC3A-204ENST00000588564 K7EP13 123 aa9.33□□□□□ -0.92
RUNDC3A-204ENST00000588564 RTL8CO15255 209 aa9.33□□□□□ -0.92
RUNDC3A-204ENST00000588564 ESDP10768 282 aa9.33□□□□□ -0.92
RUNDC3A-204ENST00000588564 MPV17L2Q567V2 206 aa9.33□□□□□ -0.92
RUNDC3A-204ENST00000588564 SMIM2Q9BVW6 85 aa9.33□□□□□ -0.92
RUNDC3A-204ENST00000588564 LAMTOR2Q9Y2Q5 125 aa9.33□□□□□ -0.92
RUNDC3A-204ENST00000588564 MT-ND6P03923 174 aa9.32□□□□□ -0.92
RUNDC3A-204ENST00000588564 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
RUNDC3A-204ENST00000588564 C6orf223Q8N319 242 aa9.32□□□□□ -0.92
RUNDC3A-204ENST00000588564 Q8N976 141 aa9.32□□□□□ -0.92
RUNDC3A-204ENST00000588564 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.31□□□□□ -0.92
RUNDC3A-204ENST00000588564 A0A087WX48 190 aa9.31□□□□□ -0.92
RUNDC3A-204ENST00000588564 IGKV2-29A2NJV5 120 aaPredicted RBP9.31□□□□□ -0.92
RUNDC3A-204ENST00000588564 RBX1P62877 108 aa9.31□□□□□ -0.92
RUNDC3A-204ENST00000588564 FABP9Q0Z7S8 132 aa9.31□□□□□ -0.92
RUNDC3A-204ENST00000588564 C10orf126Q8N4M7 172 aa9.31□□□□□ -0.92
RUNDC3A-204ENST00000588564 ALKBH7Q9BT30 221 aaPredicted RBP9.31□□□□□ -0.92
RUNDC3A-204ENST00000588564 TRAPPC1Q9Y5R8 145 aa9.31□□□□□ -0.92
RUNDC3A-204ENST00000588564 FAT2Q9NYQ8 4349 aa9.31□□□□□ -0.92
RUNDC3A-204ENST00000588564 LOC389332A0A1B0GUA5 103 aa9.3□□□□□ -0.92
RUNDC3A-204ENST00000588564 TCAPO15273 167 aa9.3□□□□□ -0.92
RUNDC3A-204ENST00000588564 SCO1O75880 301 aa9.3□□□□□ -0.92
RUNDC3A-204ENST00000588564 BTF3P20290 206 aaKnown RBP9.3□□□□□ -0.92
RUNDC3A-204ENST00000588564 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
RUNDC3A-204ENST00000588564 KIR2DL4Q99706 377 aa9.3□□□□□ -0.92
RUNDC3A-204ENST00000588564 MAP1LC3AQ9H492 121 aa9.3□□□□□ -0.92
RUNDC3A-204ENST00000588564 KLK12Q9UKR0 248 aa9.3□□□□□ -0.92
RUNDC3A-204ENST00000588564 IGLV4-60A0A075B6I1 120 aa9.29□□□□□ -0.92
RUNDC3A-204ENST00000588564 A0A1B0GUV1 79 aa9.29□□□□□ -0.92
RUNDC3A-204ENST00000588564 FCER1GP30273 86 aa9.29□□□□□ -0.92
RUNDC3A-204ENST00000588564 PKIAP61925 76 aa9.29□□□□□ -0.92
RUNDC3A-204ENST00000588564 Q8N8P6 123 aa9.29□□□□□ -0.92
RUNDC3A-204ENST00000588564 C20orf203Q8NBC4 194 aa9.29□□□□□ -0.92
RUNDC3A-204ENST00000588564 COLCA2A8K830 154 aa9.28□□□□□ -0.92
RUNDC3A-204ENST00000588564 H7C423 109 aa9.28□□□□□ -0.92
RUNDC3A-204ENST00000588564 UBE2L6O14933 153 aa9.28□□□□□ -0.92
RUNDC3A-204ENST00000588564 LAGE3Q14657 143 aa9.28□□□□□ -0.92
RUNDC3A-204ENST00000588564 ENHOQ6UWT2 76 aa9.28□□□□□ -0.92
RUNDC3A-204ENST00000588564 ANGP03950 147 aaKnown RBP9.27□□□□□ -0.93
RUNDC3A-204ENST00000588564 FGF6P10767 208 aa9.27□□□□□ -0.93
RUNDC3A-204ENST00000588564 IFI27P40305 119 aaPredicted RBP9.27□□□□□ -0.93
RUNDC3A-204ENST00000588564 ATP6V1G1O75348 118 aa9.26□□□□□ -0.93
RUNDC3A-204ENST00000588564 LINC00269Q8N2A0 174 aa9.26□□□□□ -0.93
RUNDC3A-204ENST00000588564 Q9HAA7 133 aa9.26□□□□□ -0.93
RUNDC3A-204ENST00000588564 PRR34Q9NV39 138 aa9.26□□□□□ -0.93
RUNDC3A-204ENST00000588564 TNP2Q05952 138 aa9.25□□□□□ -0.93
RUNDC3A-204ENST00000588564 MRPL52Q86TS9 123 aaKnown RBP9.25□□□□□ -0.93
RUNDC3A-204ENST00000588564 NFE4Q86UQ8 179 aa9.25□□□□□ -0.93
RUNDC3A-204ENST00000588564 UBE2WQ96B02 151 aa9.25□□□□□ -0.93
RUNDC3A-204ENST00000588564 NXT2Q9NPJ8 142 aaKnown RBP9.25□□□□□ -0.93
RUNDC3A-204ENST00000588564 TRAV8-3A0A0A6YYJ7 113 aa9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 RAB5AP20339 215 aa9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 S100A1P23297 94 aa9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 RPL39P62891 51 aaKnown RBP9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 AMMECR1LQ6DCA0 310 aa9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 RNASEKQ6P5S7 137 aaKnown RBP9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 CLPSL2Q6UWE3 100 aa9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 LINC00336Q6ZUF6 198 aa9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 UBE2D4Q9Y2X8 147 aa9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 PKD1P98161 4303 aa9.24□□□□□ -0.93
RUNDC3A-204ENST00000588564 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
RUNDC3A-204ENST00000588564 PRSS29PA6NIE9 313 aa9.23□□□□□ -0.93
RUNDC3A-204ENST00000588564 ZNF25P17030 456 aaPredicted RBP9.23□□□□□ -0.93
RUNDC3A-204ENST00000588564 C18orf32Q8TCD1 76 aa9.23□□□□□ -0.93
RUNDC3A-204ENST00000588564 FAM104AQ969W3 186 aa9.23□□□□□ -0.93
RUNDC3A-204ENST00000588564 CDC42SE2Q9NRR3 84 aa9.23□□□□□ -0.93
RUNDC3A-204ENST00000588564 DNAH11Q96DT5 4516 aa9.23□□□□□ -0.93
RUNDC3A-204ENST00000588564 TRGC2P03986 189 aa9.22□□□□□ -0.93
RUNDC3A-204ENST00000588564 REG3AQ06141 175 aa9.22□□□□□ -0.93
RUNDC3A-204ENST00000588564 Q0VG73 95 aa9.22□□□□□ -0.93
RUNDC3A-204ENST00000588564 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
RUNDC3A-204ENST00000588564 PRSS3P2Q8NHM4 247 aa9.22□□□□□ -0.93
RUNDC3A-204ENST00000588564 URB1-AS1Q96HZ7 61 aa9.22□□□□□ -0.93
RUNDC3A-204ENST00000588564 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
RUNDC3A-204ENST00000588564 CSDC2Q9Y534 153 aaKnown RBP9.22□□□□□ -0.93
RUNDC3A-204ENST00000588564 K7EMI3 77 aa9.21□□□□□ -0.94
RUNDC3A-204ENST00000588564 ORMDL2Q53FV1 153 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms