RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 FAM30AQ9NZY2 134 aa12.84□□□□□ -0.35
TPM4-208ENST00000588410 FAM229AH3BQW9 127 aa12.83□□□□□ -0.36
TPM4-208ENST00000588410 FOXA3P55318 350 aaPredicted RBP12.82□□□□□ -0.36
TPM4-208ENST00000588410 REG3AQ06141 175 aa12.82□□□□□ -0.36
TPM4-208ENST00000588410 TSKUQ8WUA8 353 aa12.82□□□□□ -0.36
TPM4-208ENST00000588410 OSTCQ9NRP0 149 aa12.82□□□□□ -0.36
TPM4-208ENST00000588410 A0A1B0GUV1 79 aa12.81□□□□□ -0.36
TPM4-208ENST00000588410 LINC01620Q4KN68 170 aa12.81□□□□□ -0.36
TPM4-208ENST00000588410 RPL39LQ96EH5 51 aaKnown RBP12.81□□□□□ -0.36
TPM4-208ENST00000588410 GFRA4Q9GZZ7 299 aa12.81□□□□□ -0.36
TPM4-208ENST00000588410 A0A1B0GUT8 65 aa12.8□□□□□ -0.36
TPM4-208ENST00000588410 HIGD1CA8MV81 97 aa12.8□□□□□ -0.36
TPM4-208ENST00000588410 USP17L23D6RBM5 183 aa12.8□□□□□ -0.36
TPM4-208ENST00000588410 INAFM2P0DMQ5 153 aa12.8□□□□□ -0.36
TPM4-208ENST00000588410 TMEM241Q24JQ0 296 aa12.8□□□□□ -0.36
TPM4-208ENST00000588410 FAM74A3Q4VXF1 159 aa12.8□□□□□ -0.36
TPM4-208ENST00000588410 FAM231BA6NCW3 169 aa12.79□□□□□ -0.36
TPM4-208ENST00000588410 C20orf203Q8NBC4 194 aa12.79□□□□□ -0.36
TPM4-208ENST00000588410 IGLV4-60A0A075B6I1 120 aa12.78□□□□□ -0.36
TPM4-208ENST00000588410 IGLV10-54A0A075B6I4 117 aa12.78□□□□□ -0.36
TPM4-208ENST00000588410 TRAV8-4A0A0B4J246 113 aa12.78□□□□□ -0.36
TPM4-208ENST00000588410 NCR2O95944 276 aa12.78□□□□□ -0.36
TPM4-208ENST00000588410 PEA15Q15121 130 aa12.78□□□□□ -0.36
TPM4-208ENST00000588410 Q6ZSA8 131 aa12.78□□□□□ -0.36
TPM4-208ENST00000588410 AMMECR1LQ6DCA0 310 aa12.77□□□□□ -0.37
TPM4-208ENST00000588410 SDHAF1A6NFY7 115 aa12.76□□□□□ -0.37
TPM4-208ENST00000588410 APCSP02743 223 aa12.76□□□□□ -0.37
TPM4-208ENST00000588410 ADIRFQ15847 76 aa12.76□□□□□ -0.37
TPM4-208ENST00000588410 ISOC2Q96AB3 205 aa12.76□□□□□ -0.37
TPM4-208ENST00000588410 TMEM191AQ9H0A3 160 aa12.76□□□□□ -0.37
TPM4-208ENST00000588410 FAT1Q14517 4588 aa12.76□□□□□ -0.37
TPM4-208ENST00000588410 PMCHP20382 165 aa12.75□□□□□ -0.37
TPM4-208ENST00000588410 RIGQ13278 110 aa12.75□□□□□ -0.37
TPM4-208ENST00000588410 ST20Q9HBF5 79 aa12.75□□□□□ -0.37
TPM4-208ENST00000588410 NAT8Q9UHE5 227 aa12.75□□□□□ -0.37
TPM4-208ENST00000588410 V9GYV3 84 aa12.75□□□□□ -0.37
TPM4-208ENST00000588410 I3L3M4 83 aa12.74□□□□□ -0.37
TPM4-208ENST00000588410 PRSS1P07477 247 aa12.74□□□□□ -0.37
TPM4-208ENST00000588410 RPL23P62829 140 aaKnown RBP12.74□□□□□ -0.37
TPM4-208ENST00000588410 KRTAP26-1Q6PEX3 210 aa12.74□□□□□ -0.37
TPM4-208ENST00000588410 TRBV6-5A0A0K0K1A5 114 aa12.73□□□□□ -0.37
TPM4-208ENST00000588410 C9JQL5 133 aa12.73□□□□□ -0.37
TPM4-208ENST00000588410 RNASEKQ6P5S7 137 aaKnown RBP12.73□□□□□ -0.37
TPM4-208ENST00000588410 CLRN3Q8NCR9 226 aa12.73□□□□□ -0.37
TPM4-208ENST00000588410 SMDT1Q9H4I9 107 aa12.73□□□□□ -0.37
TPM4-208ENST00000588410 NAT8BQ9UHF3 227 aa12.73□□□□□ -0.37
TPM4-208ENST00000588410 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.72□□□□□ -0.37
TPM4-208ENST00000588410 IGKV3OR2-268A0A0C4DH90 116 aa12.72□□□□□ -0.37
TPM4-208ENST00000588410 IGKV2-29A2NJV5 120 aaPredicted RBP12.72□□□□□ -0.37
TPM4-208ENST00000588410 H7C423 109 aa12.72□□□□□ -0.37
TPM4-208ENST00000588410 DGAT2L7PQ6IED9 249 aa12.72□□□□□ -0.37
TPM4-208ENST00000588410 NUP35Q8NFH5 326 aa12.72□□□□□ -0.37
TPM4-208ENST00000588410 MRAP2Q96G30 205 aa12.72□□□□□ -0.37
TPM4-208ENST00000588410 DNAH8Q96JB1 4490 aa12.72□□□□□ -0.37
TPM4-208ENST00000588410 RAB4AP20338 218 aa12.71□□□□□ -0.37
TPM4-208ENST00000588410 SRSF3P84103 164 aaKnown RBP12.71□□□□□ -0.37
TPM4-208ENST00000588410 SCXQ7RTU7 201 aa12.71□□□□□ -0.37
TPM4-208ENST00000588410 AMN1Q8IY45 258 aa12.71□□□□□ -0.37
TPM4-208ENST00000588410 PLA2G1BP04054 148 aaKnown RBP12.7□□□□□ -0.38
TPM4-208ENST00000588410 FGF6P10767 208 aa12.7□□□□□ -0.38
TPM4-208ENST00000588410 LINC00528Q8N1L1 170 aa12.7□□□□□ -0.38
TPM4-208ENST00000588410 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
TPM4-208ENST00000588410 CHAC1Q9BUX1 264 aa12.7□□□□□ -0.38
TPM4-208ENST00000588410 GAS8-AS1O95177 125 aa12.69□□□□□ -0.38
TPM4-208ENST00000588410 TMEM101Q96IK0 257 aa12.69□□□□□ -0.38
TPM4-208ENST00000588410 BTF3L4Q96K17 158 aa12.69□□□□□ -0.38
TPM4-208ENST00000588410 TMEM242Q9NWH2 141 aa12.69□□□□□ -0.38
TPM4-208ENST00000588410 hDV102S1A0JD36 115 aa12.68□□□□□ -0.38
TPM4-208ENST00000588410 AP5S1Q9NUS5 200 aa12.68□□□□□ -0.38
TPM4-208ENST00000588410 GAGE12HA6NDE8 117 aa12.67□□□□□ -0.38
TPM4-208ENST00000588410 PPP1R17O96001 155 aa12.67□□□□□ -0.38
TPM4-208ENST00000588410 ZNF25P17030 456 aaPredicted RBP12.67□□□□□ -0.38
TPM4-208ENST00000588410 RPS10P46783 165 aaKnown RBP12.67□□□□□ -0.38
TPM4-208ENST00000588410 C9orf163Q8N9P6 203 aa12.67□□□□□ -0.38
TPM4-208ENST00000588410 SMIM27A0A1W2PRY6 76 aa12.66□□□□□ -0.38
TPM4-208ENST00000588410 SMKR1H3BMG3 65 aa12.66□□□□□ -0.38
TPM4-208ENST00000588410 TSHBP01222 138 aa12.66□□□□□ -0.38
TPM4-208ENST00000588410 CFAP161Q6P656 301 aa12.66□□□□□ -0.38
TPM4-208ENST00000588410 CIRBP-AS1Q8TBR5 109 aa12.66□□□□□ -0.38
TPM4-208ENST00000588410 TRBV27A0A0K0K1C4 114 aa12.65□□□□□ -0.38
TPM4-208ENST00000588410 VCYO14598 125 aa12.65□□□□□ -0.38
TPM4-208ENST00000588410 CAMPP49913 170 aa12.65□□□□□ -0.38
TPM4-208ENST00000588410 POLR2KP53803 58 aaKnown RBP12.65□□□□□ -0.38
TPM4-208ENST00000588410 CHCHD10Q8WYQ3 142 aaPredicted RBP12.65□□□□□ -0.38
TPM4-208ENST00000588410 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.64□□□□□ -0.39
TPM4-208ENST00000588410 A0A1B0GW15 77 aa12.64□□□□□ -0.39
TPM4-208ENST00000588410 ESDP10768 282 aa12.64□□□□□ -0.39
TPM4-208ENST00000588410 FCER1GP30273 86 aa12.64□□□□□ -0.39
TPM4-208ENST00000588410 OR5A1Q8NGJ0 315 aa12.64□□□□□ -0.39
TPM4-208ENST00000588410 RAB14P61106 215 aa12.63□□□□□ -0.39
TPM4-208ENST00000588410 CNBPP62633 177 aaKnown RBP12.63□□□□□ -0.39
TPM4-208ENST00000588410 FAM104BQ5XKR9 115 aa12.63□□□□□ -0.39
TPM4-208ENST00000588410 C7orf77A4D0Y5 90 aa12.62□□□□□ -0.39
TPM4-208ENST00000588410 S100A8P05109 93 aa12.62□□□□□ -0.39
TPM4-208ENST00000588410 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
TPM4-208ENST00000588410 VPS13BQ7Z7G8 4022 aa12.62□□□□□ -0.39
TPM4-208ENST00000588410 PPP1R2P9O14990 202 aa12.61□□□□□ -0.39
TPM4-208ENST00000588410 MRPL51Q4U2R6 128 aaKnown RBP12.61□□□□□ -0.39
TPM4-208ENST00000588410 KIR2DL4Q99706 377 aa12.61□□□□□ -0.39
TPM4-208ENST00000588410 SMAGPQ0VAQ4 97 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms