RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 NIT2Q9NQR4 276 aa10.87□□□□□ -0.67
TMED1-203ENST00000588259 IGHV3-64A0A075B6Q5 118 aa10.86□□□□□ -0.67
TMED1-203ENST00000588259 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.86□□□□□ -0.67
TMED1-203ENST00000588259 HNRNPA3P51991 378 aaKnown RBP10.86□□□□□ -0.67
TMED1-203ENST00000588259 TWIST1Q15672 202 aa10.86□□□□□ -0.67
TMED1-203ENST00000588259 LRP1Q07954 4544 aaKnown RBP10.86□□□□□ -0.67
TMED1-203ENST00000588259 TRBV20OR9-2A0A075B6H5 130 aa10.85□□□□□ -0.67
TMED1-203ENST00000588259 A0A1B0GUV1 79 aa10.85□□□□□ -0.67
TMED1-203ENST00000588259 BCL2P10415 239 aa10.85□□□□□ -0.67
TMED1-203ENST00000588259 CNBPP62633 177 aaKnown RBP10.85□□□□□ -0.67
TMED1-203ENST00000588259 PGLYRP4Q96LB8 373 aa10.85□□□□□ -0.67
TMED1-203ENST00000588259 PLA2G2DQ9UNK4 145 aa10.85□□□□□ -0.67
TMED1-203ENST00000588259 CTRLP40313 264 aa10.84□□□□□ -0.67
TMED1-203ENST00000588259 TRAV26-2A0A0B4J265 109 aa10.83□□□□□ -0.68
TMED1-203ENST00000588259 CHTF8P0CG12 524 aa10.83□□□□□ -0.68
TMED1-203ENST00000588259 AMMECR1LQ6DCA0 310 aa10.83□□□□□ -0.68
TMED1-203ENST00000588259 NUDT10Q8NFP7 164 aa10.83□□□□□ -0.68
TMED1-203ENST00000588259 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
TMED1-203ENST00000588259 RPP21Q9H633 154 aaKnown RBP10.83□□□□□ -0.68
TMED1-203ENST00000588259 GAGE12HA6NDE8 117 aa10.82□□□□□ -0.68
TMED1-203ENST00000588259 C9orf62Q8N4C0 152 aa10.82□□□□□ -0.68
TMED1-203ENST00000588259 SMIM15Q7Z3B0 74 aa10.81□□□□□ -0.68
TMED1-203ENST00000588259 RNASE7Q9H1E1 156 aaKnown RBP10.81□□□□□ -0.68
TMED1-203ENST00000588259 HIGD2BQ4VC39 106 aa10.8□□□□□ -0.68
TMED1-203ENST00000588259 RNASEKQ6P5S7 137 aaKnown RBP10.8□□□□□ -0.68
TMED1-203ENST00000588259 CFAP161Q6P656 301 aa10.8□□□□□ -0.68
TMED1-203ENST00000588259 GATD1Q8NB37 220 aa10.8□□□□□ -0.68
TMED1-203ENST00000588259 A0A087WYN8 130 aa10.79□□□□□ -0.68
TMED1-203ENST00000588259 SLPIP03973 132 aa10.79□□□□□ -0.68
TMED1-203ENST00000588259 TAGLN2P37802 199 aaKnown RBP10.79□□□□□ -0.68
TMED1-203ENST00000588259 CIRBPQ14011 172 aaKnown RBP10.79□□□□□ -0.68
TMED1-203ENST00000588259 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
TMED1-203ENST00000588259 PKHD1L1Q86WI1 4243 aa10.79□□□□□ -0.68
TMED1-203ENST00000588259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.78□□□□□ -0.68
TMED1-203ENST00000588259 IGKV2-29A2NJV5 120 aaPredicted RBP10.78□□□□□ -0.68
TMED1-203ENST00000588259 APCSP02743 223 aa10.78□□□□□ -0.68
TMED1-203ENST00000588259 Q6ZNX1 250 aa10.78□□□□□ -0.68
TMED1-203ENST00000588259 SLC51BQ86UW2 128 aa10.78□□□□□ -0.68
TMED1-203ENST00000588259 C15orf56Q8N910 161 aa10.78□□□□□ -0.68
TMED1-203ENST00000588259 SPACA4Q8TDM5 124 aa10.78□□□□□ -0.68
TMED1-203ENST00000588259 RNF185Q96GF1 192 aa10.78□□□□□ -0.68
TMED1-203ENST00000588259 FAT3Q8TDW7 4589 aa10.78□□□□□ -0.68
TMED1-203ENST00000588259 K7EN84 100 aa10.77□□□□□ -0.69
TMED1-203ENST00000588259 OCC1Q8TAD7 63 aa10.77□□□□□ -0.69
TMED1-203ENST00000588259 CHCHD10Q8WYQ3 142 aaPredicted RBP10.77□□□□□ -0.69
TMED1-203ENST00000588259 CNFNQ9BYD5 112 aa10.77□□□□□ -0.69
TMED1-203ENST00000588259 IGKV2-24A0A0C4DH68 120 aa10.76□□□□□ -0.69
TMED1-203ENST00000588259 COX6A2Q02221 97 aa10.76□□□□□ -0.69
TMED1-203ENST00000588259 C7orf33Q8WU49 177 aa10.76□□□□□ -0.69
TMED1-203ENST00000588259 NCR2O95944 276 aa10.75□□□□□ -0.69
TMED1-203ENST00000588259 FGF6P10767 208 aa10.75□□□□□ -0.69
TMED1-203ENST00000588259 RPS10P46783 165 aaKnown RBP10.75□□□□□ -0.69
TMED1-203ENST00000588259 CEBPGP53567 150 aa10.75□□□□□ -0.69
TMED1-203ENST00000588259 FOXA3P55318 350 aaPredicted RBP10.75□□□□□ -0.69
TMED1-203ENST00000588259 MAJINQ3KP22 176 aa10.75□□□□□ -0.69
TMED1-203ENST00000588259 Q6ZRU5 148 aa10.75□□□□□ -0.69
TMED1-203ENST00000588259 GTSF1Q8WW33 167 aa10.75□□□□□ -0.69
TMED1-203ENST00000588259 SDHAF1A6NFY7 115 aa10.74□□□□□ -0.69
TMED1-203ENST00000588259 PHOX2AO14813 284 aa10.74□□□□□ -0.69
TMED1-203ENST00000588259 GATCO43716 136 aaKnown RBP10.74□□□□□ -0.69
TMED1-203ENST00000588259 TEX261Q6UWH6 196 aa10.74□□□□□ -0.69
TMED1-203ENST00000588259 TCTE3Q8IZS6 198 aa10.74□□□□□ -0.69
TMED1-203ENST00000588259 PMCHP20382 165 aa10.73□□□□□ -0.69
TMED1-203ENST00000588259 BORCS7Q96B45 105 aa10.73□□□□□ -0.69
TMED1-203ENST00000588259 BTF3L4Q96K17 158 aa10.73□□□□□ -0.69
TMED1-203ENST00000588259 HMCN2Q8NDA2 5059 aa10.73□□□□□ -0.69
TMED1-203ENST00000588259 hCG_2014768A0A024R1R8 64 aa10.72□□□□□ -0.69
TMED1-203ENST00000588259 NDUFS6O75380 124 aaKnown RBP10.72□□□□□ -0.69
TMED1-203ENST00000588259 XCL1P47992 114 aa10.72□□□□□ -0.69
TMED1-203ENST00000588259 PRSS3P2Q8NHM4 247 aa10.72□□□□□ -0.69
TMED1-203ENST00000588259 TMEM101Q96IK0 257 aa10.72□□□□□ -0.69
TMED1-203ENST00000588259 PLAC8Q9NZF1 115 aa10.72□□□□□ -0.69
TMED1-203ENST00000588259 A8MWL6 223 aa10.71□□□□□ -0.69
TMED1-203ENST00000588259 H7C423 109 aa10.71□□□□□ -0.69
TMED1-203ENST00000588259 LYPD6BQ8NI32 183 aa10.71□□□□□ -0.69
TMED1-203ENST00000588259 GVQW2A0A096LPI5 108 aaPredicted RBP10.7□□□□□ -0.7
TMED1-203ENST00000588259 I3L3M4 83 aa10.7□□□□□ -0.7
TMED1-203ENST00000588259 MT1HL1P0DM35 61 aa10.7□□□□□ -0.7
TMED1-203ENST00000588259 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
TMED1-203ENST00000588259 STPG4Q8N801 248 aa10.7□□□□□ -0.7
TMED1-203ENST00000588259 OR5A1Q8NGJ0 315 aa10.7□□□□□ -0.7
TMED1-203ENST00000588259 TMEM250H0YL14 139 aa10.69□□□□□ -0.7
TMED1-203ENST00000588259 FOXI1Q12951 378 aa10.69□□□□□ -0.7
TMED1-203ENST00000588259 ALKAL2Q6UX46 152 aa10.69□□□□□ -0.7
TMED1-203ENST00000588259 MRAP2Q96G30 205 aa10.69□□□□□ -0.7
TMED1-203ENST00000588259 ST20Q9HBF5 79 aa10.69□□□□□ -0.7
TMED1-203ENST00000588259 TMEM242Q9NWH2 141 aa10.69□□□□□ -0.7
TMED1-203ENST00000588259 CCL25O15444 150 aa10.68□□□□□ -0.7
TMED1-203ENST00000588259 BLOC1S1P78537 153 aa10.68□□□□□ -0.7
TMED1-203ENST00000588259 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
TMED1-203ENST00000588259 A0A096LNI7 61 aa10.67□□□□□ -0.7
TMED1-203ENST00000588259 FAM231DQ6ZW35 169 aa10.67□□□□□ -0.7
TMED1-203ENST00000588259 AKAP14Q86UN6 197 aa10.67□□□□□ -0.7
TMED1-203ENST00000588259 LINC00959A0A1B0GUT2 108 aa10.66□□□□□ -0.7
TMED1-203ENST00000588259 FAM231BA6NCW3 169 aa10.66□□□□□ -0.7
TMED1-203ENST00000588259 GAS8-AS1O95177 125 aa10.66□□□□□ -0.7
TMED1-203ENST00000588259 TSHBP01222 138 aa10.66□□□□□ -0.7
TMED1-203ENST00000588259 PRR3P79522 188 aaKnown RBP10.66□□□□□ -0.7
TMED1-203ENST00000588259 SS18Q15532 418 aa10.66□□□□□ -0.7
TMED1-203ENST00000588259 CARD19Q96LW7 228 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms