RNA–Protein interactions for RNA: ENST00000587539.1

ZNF404-202, Transcript of zinc finger protein 404, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF404, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-202ENST00000587539 CPSF1Q10570 1443 aaKnown RBP0.21□□□□□ -2.38
ZNF404-202ENST00000587539 SMG6Q86US8 1419 aaKnown RBP0.21□□□□□ -2.38
ZNF404-202ENST00000587539 KNTC1P50748 2209 aa0.21□□□□□ -2.38
ZNF404-202ENST00000587539 IFT172Q9UG01 1749 aa0.21□□□□□ -2.38
ZNF404-202ENST00000587539 MBD5Q9P267 1494 aa0.21□□□□□ -2.38
ZNF404-202ENST00000587539 ZNF815PA8K554 130 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 KRTAP2-3P0C7H8 128 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 PP6455Q8WZ26 134 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 KRTAP2-4Q9BYR9 128 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 KRTAP2-1Q9BYU5 128 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 DYNLRB1Q9NP97 96 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 SCN3BQ9NY72 215 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 SPCS1Q9Y6A9 102 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 LRRC37A2A6NM11 1700 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 A2ML1A8K2U0 1454 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 MRC1P22897 1456 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 G3V318 75 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 M0R135 149 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 TNFP01375 233 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 MRPS10P82664 201 aaKnown RBP0.2□□□□□ -2.38
ZNF404-202ENST00000587539 MRPL54Q6P161 138 aaKnown RBP0.2□□□□□ -2.38
ZNF404-202ENST00000587539 COMMD6Q7Z4G1 85 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 C5orf38Q86SI9 138 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 LSM10Q969L4 123 aaKnown RBP0.2□□□□□ -2.38
ZNF404-202ENST00000587539 TMEM203Q969S6 136 aa0.2□□□□□ -2.38
ZNF404-202ENST00000587539 ROCK2O75116 1388 aaKnown RBP0.2□□□□□ -2.38
ZNF404-202ENST00000587539 PHLPP1O60346 1717 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 NALCNQ8IZF0 1738 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 FAM24AA6NFZ4 105 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 UQCR11O14957 56 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 SNAPC5O75971 98 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 GNG4P50150 75 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 TMEM170BQ5T4T1 132 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 SSBP3-AS1Q7Z2R9 100 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 BAGE2Q86Y30 109 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 AMELXQ99217 191 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 UQCR10Q9UDW1 63 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 PRO0255Q9UI72 69 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 NAV3Q8IVL0 2385 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 ZNF462Q96JM2 2506 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 ZMYM4Q5VZL5 1548 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 PRDM2Q13029 1718 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 ARFGEF1Q9Y6D6 1849 aa0.19□□□□□ -2.38
ZNF404-202ENST00000587539 TRBV7-3A0A075B6L6 115 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 TRAV22A0A0B4J277 110 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 IFITM1P13164 125 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 C9orf153Q5TBE3 101 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 FAM135AQ9P2D6 1515 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 ARAP2Q8WZ64 1704 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 ABCA4P78363 2273 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 UBE2L5PA0A1B0GUS4 154 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 F6UZH7 168 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 DLEU1O43261 78 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 CFDP00746 253 aaPredicted RBP0.18□□□□□ -2.38
ZNF404-202ENST00000587539 UBE2L3P68036 154 aaKnown RBP0.18□□□□□ -2.38
ZNF404-202ENST00000587539 HAMPP81172 84 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 SVBPQ8N300 66 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 NDUFA4L2Q9NRX3 87 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 U3KQA8 63 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 MYOM2P54296 1465 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 MAPKBP1O60336 1514 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 TNCP24821 2201 aa0.18□□□□□ -2.38
ZNF404-202ENST00000587539 SHANK2Q9UPX8 1470 aa0.17□□□□□ -2.38
ZNF404-202ENST00000587539 F8VRH5 84 aa0.17□□□□□ -2.38
ZNF404-202ENST00000587539 WHAMMP3Q1A5X7 153 aa0.17□□□□□ -2.38
ZNF404-202ENST00000587539 FAIMQ9NVQ4 179 aa0.17□□□□□ -2.38
ZNF404-202ENST00000587539 IER3IP1Q9Y5U9 82 aa0.17□□□□□ -2.38
ZNF404-202ENST00000587539 BIVM-ERCC5R4GMW8 1640 aa0.17□□□□□ -2.38
ZNF404-202ENST00000587539 ERCC6L2Q5T890 1561 aa0.17□□□□□ -2.38
ZNF404-202ENST00000587539 KIAA0100Q14667 2235 aaKnown RBP0.16□□□□□ -2.38
ZNF404-202ENST00000587539 M0R3E3 92 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 PPP3R1P63098 170 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 DCDP81605 110 aaKnown RBP0.16□□□□□ -2.38
ZNF404-202ENST00000587539 GNG8Q9UK08 70 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 MYH9P35579 1960 aaKnown RBP0.16□□□□□ -2.38
ZNF404-202ENST00000587539 PATJQ8NI35 1801 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 KIF21AQ7Z4S6 1674 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 NHSL1Q5SYE7 1610 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 APCP25054 2843 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 MYH7P12883 1935 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 FOCADQ5VW36 1801 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 DOCK2Q92608 1830 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 LOC100130705A0A1B0GUX0 176 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 MGPP08493 103 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 PIGYQ3MUY2 71 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 Q8IZM0 81 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 ABCA1O95477 2261 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 F5P12259 2224 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 CUL7Q14999 1698 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 RIMS1Q86UR5 1692 aaKnown RBP0.16□□□□□ -2.38
ZNF404-202ENST00000587539 QRICH2Q9H0J4 1663 aa0.16□□□□□ -2.38
ZNF404-202ENST00000587539 NRKQ7Z2Y5 1582 aa0.15□□□□□ -2.38
ZNF404-202ENST00000587539 MYH8P13535 1937 aa0.15□□□□□ -2.38
ZNF404-202ENST00000587539 IGLC7A0M8Q6 106 aa0.15□□□□□ -2.39
ZNF404-202ENST00000587539 NAP1L6A6NFF2 107 aa0.15□□□□□ -2.39
ZNF404-202ENST00000587539 C10orf142B7Z368 130 aa0.15□□□□□ -2.39
ZNF404-202ENST00000587539 H3BQ15 152 aa0.15□□□□□ -2.39
ZNF404-202ENST00000587539 HMGN4O00479 90 aa0.15□□□□□ -2.39
ZNF404-202ENST00000587539 SFT2D2O95562 160 aa0.15□□□□□ -2.39
ZNF404-202ENST00000587539 COX6CP09669 75 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms