RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SAMD5Q5TGI4 173 aa14.09□□□□□ -0.15
TRIM47-204ENST00000587339 FAM222AQ5U5X8 452 aa14.09□□□□□ -0.15
TRIM47-204ENST00000587339 C20orf203Q8NBC4 194 aa14.09□□□□□ -0.15
TRIM47-204ENST00000587339 ZMAT4Q9H898 229 aa14.09□□□□□ -0.15
TRIM47-204ENST00000587339 IGIPA6NJ69 53 aa14.09□□□□□ -0.15
TRIM47-204ENST00000587339 DEFB4AO15263 64 aa14.09□□□□□ -0.15
TRIM47-204ENST00000587339 LBHQ53QV2 105 aaPredicted RBP14.09□□□□□ -0.15
TRIM47-204ENST00000587339 PHLDA1Q8WV24 401 aaPredicted RBP14.09□□□□□ -0.15
TRIM47-204ENST00000587339 IGHV3-38A0A0C4DH36 116 aa14.08□□□□□ -0.16
TRIM47-204ENST00000587339 FHL2Q14192 279 aa14.08□□□□□ -0.16
TRIM47-204ENST00000587339 Q8NAQ8 132 aa14.08□□□□□ -0.16
TRIM47-204ENST00000587339 TIMM17AQ99595 171 aa14.07□□□□□ -0.16
TRIM47-204ENST00000587339 A0A087WX48 190 aa14.07□□□□□ -0.16
TRIM47-204ENST00000587339 TRAV12-1A0A0B4J245 112 aa14.07□□□□□ -0.16
TRIM47-204ENST00000587339 COTL1Q14019 142 aa14.07□□□□□ -0.16
TRIM47-204ENST00000587339 BAALCQ8WXS3 180 aa14.07□□□□□ -0.16
TRIM47-204ENST00000587339 TMEM141Q96I45 108 aa14.07□□□□□ -0.16
TRIM47-204ENST00000587339 MDFIQ99750 246 aa14.07□□□□□ -0.16
TRIM47-204ENST00000587339 A0A1B0GV90 55 aa14.06□□□□□ -0.16
TRIM47-204ENST00000587339 GAGE12JA6NER3 117 aa14.05□□□□□ -0.16
TRIM47-204ENST00000587339 GAGE1Q13065 139 aa14.05□□□□□ -0.16
TRIM47-204ENST00000587339 GAGE4Q13068 117 aa14.05□□□□□ -0.16
TRIM47-204ENST00000587339 GAGE5Q13069 117 aa14.05□□□□□ -0.16
TRIM47-204ENST00000587339 GAGE13Q4V321 117 aa14.05□□□□□ -0.16
TRIM47-204ENST00000587339 MRPL35Q9NZE8 188 aaKnown RBP14.05□□□□□ -0.16
TRIM47-204ENST00000587339 DAZ4Q86SG3 579 aaKnown RBP14.05□□□□□ -0.16
TRIM47-204ENST00000587339 C2orf88Q9BSF0 95 aa14.05□□□□□ -0.16
TRIM47-204ENST00000587339 DAZ3Q9NR90 486 aaKnown RBP14.05□□□□□ -0.16
TRIM47-204ENST00000587339 CMYA5Q8N3K9 4069 aa14.04□□□□□ -0.16
TRIM47-204ENST00000587339 DPM2O94777 84 aa14.04□□□□□ -0.16
TRIM47-204ENST00000587339 IGKCP01834 107 aa14.04□□□□□ -0.16
TRIM47-204ENST00000587339 IGLC3P0DOY3 106 aa14.04□□□□□ -0.16
TRIM47-204ENST00000587339 UBE2D3P61077 147 aa14.04□□□□□ -0.16
TRIM47-204ENST00000587339 UBE2D2P62837 147 aa14.04□□□□□ -0.16
TRIM47-204ENST00000587339 MIEN1Q9BRT3 115 aa14.04□□□□□ -0.16
TRIM47-204ENST00000587339 PRADC1Q9BSG0 188 aa14.04□□□□□ -0.16
TRIM47-204ENST00000587339 HHLA3Q9XRX5 114 aa14.03□□□□□ -0.16
TRIM47-204ENST00000587339 CHCHD7Q9BUK0 85 aa14.03□□□□□ -0.16
TRIM47-204ENST00000587339 LOC100131303A0A0U1RQF7 123 aa14.02□□□□□ -0.16
TRIM47-204ENST00000587339 F8VRH5 84 aa14.02□□□□□ -0.16
TRIM47-204ENST00000587339 CHTOPQ9Y3Y2 248 aaKnown RBP14.02□□□□□ -0.16
TRIM47-204ENST00000587339 ANK2Q01484 3957 aa14.02□□□□□ -0.17
TRIM47-204ENST00000587339 PRSS29PA6NIE9 313 aa14.02□□□□□ -0.17
TRIM47-204ENST00000587339 STPG4Q8N801 248 aa14.02□□□□□ -0.17
TRIM47-204ENST00000587339 PLNP26678 52 aa14.01□□□□□ -0.17
TRIM47-204ENST00000587339 DAD1P61803 113 aa14.01□□□□□ -0.17
TRIM47-204ENST00000587339 PMVKQ15126 192 aa14.01□□□□□ -0.17
TRIM47-204ENST00000587339 UQCR10Q9UDW1 63 aa14.01□□□□□ -0.17
TRIM47-204ENST00000587339 SPART-AS1P0CW21 52 aa14□□□□□ -0.17
TRIM47-204ENST00000587339 PYGO1Q9Y3Y4 419 aa14□□□□□ -0.17
TRIM47-204ENST00000587339 CELA1Q9UNI1 258 aa14□□□□□ -0.17
TRIM47-204ENST00000587339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.99□□□□□ -0.17
TRIM47-204ENST00000587339 IGKV2-29A2NJV5 120 aaPredicted RBP13.99□□□□□ -0.17
TRIM47-204ENST00000587339 OPRPNQ99935 248 aaPredicted RBP13.99□□□□□ -0.17
TRIM47-204ENST00000587339 CST9LQ9H4G1 147 aa13.99□□□□□ -0.17
TRIM47-204ENST00000587339 PRO0255Q9UI72 69 aa13.99□□□□□ -0.17
TRIM47-204ENST00000587339 RETNQ9HD89 108 aa13.98□□□□□ -0.17
TRIM47-204ENST00000587339 CRYBA4P53673 196 aa13.98□□□□□ -0.17
TRIM47-204ENST00000587339 ANKRD39Q53RE8 183 aa13.98□□□□□ -0.17
TRIM47-204ENST00000587339 PAPPA-AS1Q5QFB9 102 aa13.98□□□□□ -0.17
TRIM47-204ENST00000587339 ZC2HC1BQ5TFG8 222 aa13.98□□□□□ -0.17
TRIM47-204ENST00000587339 IGLV4-3A0A075B6K6 122 aa13.97□□□□□ -0.17
TRIM47-204ENST00000587339 NTM-AS1Q6ZSK4 140 aa13.97□□□□□ -0.17
TRIM47-204ENST00000587339 UBE2D4Q9Y2X8 147 aa13.97□□□□□ -0.17
TRIM47-204ENST00000587339 TCTAP57738 103 aa13.96□□□□□ -0.17
TRIM47-204ENST00000587339 CEMP1Q6PRD7 247 aaPredicted RBP13.96□□□□□ -0.17
TRIM47-204ENST00000587339 GTSF1LQ9H1H1 148 aa13.96□□□□□ -0.17
TRIM47-204ENST00000587339 SPANXA1Q9NS26 97 aa13.96□□□□□ -0.17
TRIM47-204ENST00000587339 PRB2P02812 416 aaPredicted RBP13.96□□□□□ -0.18
TRIM47-204ENST00000587339 ATP5G1P05496 136 aa13.96□□□□□ -0.18
TRIM47-204ENST00000587339 VCX2Q9H322 139 aa13.96□□□□□ -0.18
TRIM47-204ENST00000587339 NOTCH1P46531 2555 aa13.95□□□□□ -0.18
TRIM47-204ENST00000587339 TEX48A0A1B0GUV7 120 aa13.95□□□□□ -0.18
TRIM47-204ENST00000587339 NPSP0C0P6 89 aa13.95□□□□□ -0.18
TRIM47-204ENST00000587339 LINC00694P0DN24 101 aa13.94□□□□□ -0.18
TRIM47-204ENST00000587339 GYPEP15421 78 aa13.94□□□□□ -0.18
TRIM47-204ENST00000587339 SLC25A34Q6PIV7 304 aa13.94□□□□□ -0.18
TRIM47-204ENST00000587339 IGLV4-69A0A075B6H9 119 aa13.93□□□□□ -0.18
TRIM47-204ENST00000587339 PAX4O43316 350 aa13.93□□□□□ -0.18
TRIM47-204ENST00000587339 COX8AP10176 69 aa13.92□□□□□ -0.18
TRIM47-204ENST00000587339 NMUP48645 174 aa13.92□□□□□ -0.18
TRIM47-204ENST00000587339 HNRNPA3P51991 378 aaKnown RBP13.92□□□□□ -0.18
TRIM47-204ENST00000587339 FAM104AQ969W3 186 aa13.92□□□□□ -0.18
TRIM47-204ENST00000587339 TRBV25-1A0A075B6N4 114 aa13.92□□□□□ -0.18
TRIM47-204ENST00000587339 DGAT2L7PQ6IED9 249 aa13.92□□□□□ -0.18
TRIM47-204ENST00000587339 KPRPQ5T749 579 aaPredicted RBP13.91□□□□□ -0.18
TRIM47-204ENST00000587339 AMELXQ99217 191 aa13.91□□□□□ -0.18
TRIM47-204ENST00000587339 TMEM243Q9BU79 118 aa13.91□□□□□ -0.18
TRIM47-204ENST00000587339 TIMM21Q9BVV7 248 aa13.91□□□□□ -0.18
TRIM47-204ENST00000587339 TP73-AS1Q9UF72 201 aa13.91□□□□□ -0.18
TRIM47-204ENST00000587339 DNAH3Q8TD57 4116 aa13.9□□□□□ -0.18
TRIM47-204ENST00000587339 NBEAL1Q6ZS30 2694 aa13.9□□□□□ -0.18
TRIM47-204ENST00000587339 SBSPONQ8IVN8 264 aa13.9□□□□□ -0.18
TRIM47-204ENST00000587339 ATP6V0E2Q8NHE4 81 aa13.9□□□□□ -0.18
TRIM47-204ENST00000587339 C11orf86A6NJI1 115 aa13.9□□□□□ -0.18
TRIM47-204ENST00000587339 F5H768 121 aa13.9□□□□□ -0.18
TRIM47-204ENST00000587339 K7EIL1 84 aa13.9□□□□□ -0.18
TRIM47-204ENST00000587339 RNASE13Q5GAN3 156 aaKnown RBP13.9□□□□□ -0.18
TRIM47-204ENST00000587339 TRBV6-8A0A0A6YYG3 113 aa13.89□□□□□ -0.19
TRIM47-204ENST00000587339 A0A0J9YY99 117 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms