RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 TRAV26-2A0A0B4J265 109 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 A0A1B0GUV1 79 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 SDHAF1A6NFY7 115 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 H7C423 109 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 I3L3M4 83 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 PMCHP20382 165 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 FCER1GP30273 86 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 FUSP35637 526 aaKnown RBP eCLIP3.39□□□□□ -1.87
LINC01140-208ENST00000587165 FOXA3P55318 350 aaPredicted RBP3.39□□□□□ -1.87
LINC01140-208ENST00000587165 KRTAP10-1P60331 282 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 REG3AQ06141 175 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 RNASEKQ6P5S7 137 aaKnown RBP3.39□□□□□ -1.87
LINC01140-208ENST00000587165 CFAP161Q6P656 301 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 CLPSL2Q6UWE3 100 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 NTM-AS1Q6ZSK4 140 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 LINC00269Q8N2A0 174 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 GATD1Q8NB37 220 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 ISOC2Q96AB3 205 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 TMEM191AQ9H0A3 160 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 AP5S1Q9NUS5 200 aa3.39□□□□□ -1.87
LINC01140-208ENST00000587165 DMBT1Q9UGM3 2413 aaPredicted RBP3.38□□□□□ -1.87
LINC01140-208ENST00000587165 TRBV6-5A0A0K0K1A5 114 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 USP17L23D6RBM5 183 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 F8W036 122 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 FAM229AH3BQW9 127 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 PPP1R2P9O14990 202 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 TCAPO15273 167 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 ZNF25P17030 456 aaPredicted RBP3.38□□□□□ -1.87
LINC01140-208ENST00000587165 RPL23P62829 140 aaKnown RBP3.38□□□□□ -1.87
LINC01140-208ENST00000587165 DGAT2L7PQ6IED9 249 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 ENHOQ6UWT2 76 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 CLRN3Q8NCR9 226 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 NUP35Q8NFH5 326 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 OR5A1Q8NGJ0 315 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 TMEM18Q96B42 140 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 RPL39LQ96EH5 51 aaKnown RBP3.38□□□□□ -1.87
LINC01140-208ENST00000587165 KIR2DL4Q99706 377 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 PRR34Q9NV39 138 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 V9GYV3 84 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 DNAH17Q9UFH2 4485 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 FAT2Q9NYQ8 4349 aa3.38□□□□□ -1.87
LINC01140-208ENST00000587165 DNAH2Q9P225 4427 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 DNAH11Q96DT5 4516 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.37□□□□□ -1.87
LINC01140-208ENST00000587165 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.37□□□□□ -1.87
LINC01140-208ENST00000587165 IGKV3OR2-268A0A0C4DH90 116 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 SMIM27A0A1W2PRY6 76 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 IGKV2-29A2NJV5 120 aaPredicted RBP3.37□□□□□ -1.87
LINC01140-208ENST00000587165 C7orf77A4D0Y5 90 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 LINC00862A6NCI5 91 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 VCYO14598 125 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 MT-ND4LP03901 98 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 FGF6P10767 208 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 CAMPP49913 170 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 HBBP68871 147 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 PNRC1Q12796 327 aaPredicted RBP3.37□□□□□ -1.87
LINC01140-208ENST00000587165 WFDC2Q14508 124 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 AMN1Q8IY45 258 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 TMEM242Q9NWH2 141 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 PKIGQ9Y2B9 76 aa3.37□□□□□ -1.87
LINC01140-208ENST00000587165 HERC2O95714 4834 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 IGLV4-60A0A075B6I1 120 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 TRBV27A0A0K0K1C4 114 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 hDV102S1A0JD36 115 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 PPBPP02775 128 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 PLA2G1BP04054 148 aaKnown RBP3.36□□□□□ -1.87
LINC01140-208ENST00000587165 RAB4AP20338 218 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 CKS2P33552 79 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 SUMO2P61956 95 aaKnown RBP3.36□□□□□ -1.87
LINC01140-208ENST00000587165 Q5VSD8 79 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 FAM104BQ5XKR9 115 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 ATP5L2Q7Z4Y8 100 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 C20orf203Q8NBC4 194 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 DEFB104AQ8WTQ1 72 aa3.36□□□□□ -1.87
LINC01140-208ENST00000587165 KIAA1109Q2LD37 5005 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 GAGE12HA6NDE8 117 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 C9JQL5 133 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 SMR3BP02814 79 aaPredicted RBP3.35□□□□□ -1.87
LINC01140-208ENST00000587165 INAFM2P0DMQ5 153 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 RAB5AP20339 215 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 XGP55808 180 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 SRSF3P84103 164 aaKnown RBP3.35□□□□□ -1.87
LINC01140-208ENST00000587165 SS18Q15532 418 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 MRPL54Q6P161 138 aaKnown RBP3.35□□□□□ -1.87
LINC01140-208ENST00000587165 CHCHD10Q8WYQ3 142 aaPredicted RBP3.35□□□□□ -1.87
LINC01140-208ENST00000587165 ANAPC16Q96DE5 110 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 RNF185Q96GF1 192 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 C20orf78Q9BR46 151 aa3.35□□□□□ -1.87
LINC01140-208ENST00000587165 FLG2Q5D862 2391 aaPredicted RBP3.35□□□□□ -1.87
LINC01140-208ENST00000587165 IGHV3-64A0A075B6Q5 118 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 D6R8Y8 96 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 SMKR1H3BMG3 65 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 PHOX2AO14813 284 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 CCL25O15444 150 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 TSHBP01222 138 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 PRSS1P07477 247 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 MALP21145 153 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 RPS10P46783 165 aaKnown RBP3.34□□□□□ -1.87
LINC01140-208ENST00000587165 XCL1P47992 114 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms