RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 STPG4Q8N801 248 aa10.2□□□□□ -0.78
NPC1-205ENST00000587163 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
NPC1-205ENST00000587163 FAM213BQ8TBF2 198 aa10.2□□□□□ -0.78
NPC1-205ENST00000587163 PGLYRP4Q96LB8 373 aa10.2□□□□□ -0.78
NPC1-205ENST00000587163 IGKV3OR2-268A0A0C4DH90 116 aa10.19□□□□□ -0.78
NPC1-205ENST00000587163 PFDN1O60925 122 aa10.19□□□□□ -0.78
NPC1-205ENST00000587163 RPL35P42766 123 aaKnown RBP10.19□□□□□ -0.78
NPC1-205ENST00000587163 CFAP161Q6P656 301 aa10.19□□□□□ -0.78
NPC1-205ENST00000587163 NIT2Q9NQR4 276 aa10.19□□□□□ -0.78
NPC1-205ENST00000587163 UBE2L6O14933 153 aa10.18□□□□□ -0.78
NPC1-205ENST00000587163 AMTP48728 403 aa10.18□□□□□ -0.78
NPC1-205ENST00000587163 KCNRGQ8N5I3 272 aa10.18□□□□□ -0.78
NPC1-205ENST00000587163 OR2D3Q8NGH3 330 aa10.18□□□□□ -0.78
NPC1-205ENST00000587163 A0A096LNI7 61 aa10.17□□□□□ -0.78
NPC1-205ENST00000587163 CACNG7P62955 275 aa10.17□□□□□ -0.78
NPC1-205ENST00000587163 C19orf71A6NCJ1 209 aa10.16□□□□□ -0.78
NPC1-205ENST00000587163 COTL1Q14019 142 aa10.16□□□□□ -0.78
NPC1-205ENST00000587163 SPINK6Q6UWN8 80 aa10.16□□□□□ -0.78
NPC1-205ENST00000587163 CHCHD10Q8WYQ3 142 aaPredicted RBP10.16□□□□□ -0.78
NPC1-205ENST00000587163 GVQW2A0A096LPI5 108 aaPredicted RBP10.15□□□□□ -0.78
NPC1-205ENST00000587163 SMLR1H3BR10 107 aa10.15□□□□□ -0.78
NPC1-205ENST00000587163 RPS20P60866 119 aaKnown RBP10.15□□□□□ -0.78
NPC1-205ENST00000587163 CCL20P78556 96 aa10.15□□□□□ -0.78
NPC1-205ENST00000587163 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
NPC1-205ENST00000587163 CENPWQ5EE01 88 aa10.15□□□□□ -0.78
NPC1-205ENST00000587163 LYZL1Q6UWQ5 148 aa10.15□□□□□ -0.78
NPC1-205ENST00000587163 UMAD1C9J7I0 102 aa10.14□□□□□ -0.79
NPC1-205ENST00000587163 H2AFB1P0C5Y9 115 aa10.14□□□□□ -0.79
NPC1-205ENST00000587163 NTF3P20783 257 aa10.14□□□□□ -0.79
NPC1-205ENST00000587163 C11orf52Q96A22 123 aa10.14□□□□□ -0.79
NPC1-205ENST00000587163 RAB19A4D1S5 217 aa10.13□□□□□ -0.79
NPC1-205ENST00000587163 F2Z2F3 143 aa10.13□□□□□ -0.79
NPC1-205ENST00000587163 GAS8-AS1O95177 125 aa10.13□□□□□ -0.79
NPC1-205ENST00000587163 TRGC1P0CF51 173 aa10.13□□□□□ -0.79
NPC1-205ENST00000587163 REG3GQ6UW15 175 aa10.13□□□□□ -0.79
NPC1-205ENST00000587163 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
NPC1-205ENST00000587163 FOXI1Q12951 378 aa10.12□□□□□ -0.79
NPC1-205ENST00000587163 Q6ZNX1 250 aa10.12□□□□□ -0.79
NPC1-205ENST00000587163 LINC00526Q96FQ7 95 aa10.12□□□□□ -0.79
NPC1-205ENST00000587163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.11□□□□□ -0.79
NPC1-205ENST00000587163 TRAV26-2A0A0B4J265 109 aa10.11□□□□□ -0.79
NPC1-205ENST00000587163 IGKV2-29A2NJV5 120 aaPredicted RBP10.11□□□□□ -0.79
NPC1-205ENST00000587163 C9orf62Q8N4C0 152 aa10.11□□□□□ -0.79
NPC1-205ENST00000587163 GNG13Q9P2W3 67 aa10.11□□□□□ -0.79
NPC1-205ENST00000587163 IFNA1P01562 189 aa10.1□□□□□ -0.79
NPC1-205ENST00000587163 AMMECR1LQ6DCA0 310 aa10.1□□□□□ -0.79
NPC1-205ENST00000587163 RNASEKQ6P5S7 137 aaKnown RBP10.1□□□□□ -0.79
NPC1-205ENST00000587163 TRBV20OR9-2A0A075B6H5 130 aa10.09□□□□□ -0.79
NPC1-205ENST00000587163 XKRY2A2RUG3 117 aa10.09□□□□□ -0.79
NPC1-205ENST00000587163 FGF6P10767 208 aa10.09□□□□□ -0.79
NPC1-205ENST00000587163 ZNF345Q14585 488 aa10.09□□□□□ -0.79
NPC1-205ENST00000587163 Q6ZRP5 223 aa10.09□□□□□ -0.79
NPC1-205ENST00000587163 RPL39LQ96EH5 51 aaKnown RBP10.09□□□□□ -0.79
NPC1-205ENST00000587163 LPAP08519 4548 aa10.08□□□□□ -0.8
NPC1-205ENST00000587163 GNG4P50150 75 aa10.08□□□□□ -0.8
NPC1-205ENST00000587163 MANBALQ9NQG1 85 aa10.08□□□□□ -0.8
NPC1-205ENST00000587163 LINC00474Q9P2X8 69 aa10.08□□□□□ -0.8
NPC1-205ENST00000587163 CTRLP40313 264 aa10.07□□□□□ -0.8
NPC1-205ENST00000587163 XCL1P47992 114 aa10.07□□□□□ -0.8
NPC1-205ENST00000587163 FOXA3P55318 350 aaPredicted RBP10.07□□□□□ -0.8
NPC1-205ENST00000587163 TWIST1Q15672 202 aa10.07□□□□□ -0.8
NPC1-205ENST00000587163 H7C423 109 aa10.06□□□□□ -0.8
NPC1-205ENST00000587163 NCR2O95944 276 aa10.06□□□□□ -0.8
NPC1-205ENST00000587163 NUDT10Q8NFP7 164 aa10.06□□□□□ -0.8
NPC1-205ENST00000587163 OR5A1Q8NGJ0 315 aa10.06□□□□□ -0.8
NPC1-205ENST00000587163 SMIM12Q96EX1 92 aa10.06□□□□□ -0.8
NPC1-205ENST00000587163 NUDT11Q96G61 164 aa10.06□□□□□ -0.8
NPC1-205ENST00000587163 CNFNQ9BYD5 112 aa10.06□□□□□ -0.8
NPC1-205ENST00000587163 IGHV1-58A0A0C4DH39 117 aa10.05□□□□□ -0.8
NPC1-205ENST00000587163 LINC00959A0A1B0GUT2 108 aa10.05□□□□□ -0.8
NPC1-205ENST00000587163 FAM231BA6NCW3 169 aa10.05□□□□□ -0.8
NPC1-205ENST00000587163 CCL25O15444 150 aa10.05□□□□□ -0.8
NPC1-205ENST00000587163 BCL2L11O43521 198 aa10.05□□□□□ -0.8
NPC1-205ENST00000587163 CARD19Q96LW7 228 aa10.05□□□□□ -0.8
NPC1-205ENST00000587163 TRAV1-1A0A0B4J248 108 aa10.04□□□□□ -0.8
NPC1-205ENST00000587163 APCSP02743 223 aa10.04□□□□□ -0.8
NPC1-205ENST00000587163 KANTRA0A1W2PQU2 76 aa10.03□□□□□ -0.8
NPC1-205ENST00000587163 SDHAF1A6NFY7 115 aa10.03□□□□□ -0.8
NPC1-205ENST00000587163 HMSDA8MTL9 139 aa10.03□□□□□ -0.8
NPC1-205ENST00000587163 SYCNQ0VAF6 134 aa10.03□□□□□ -0.8
NPC1-205ENST00000587163 MED9Q9NWA0 146 aa10.03□□□□□ -0.8
NPC1-205ENST00000587163 A0A1W2PNN7 141 aa10.02□□□□□ -0.81
NPC1-205ENST00000587163 ZNF25P17030 456 aaPredicted RBP10.02□□□□□ -0.81
NPC1-205ENST00000587163 PTTG1IPP53801 180 aa10.02□□□□□ -0.81
NPC1-205ENST00000587163 MEF2BQ02080 365 aaPredicted RBP10.02□□□□□ -0.81
NPC1-205ENST00000587163 RNASE7Q9H1E1 156 aaKnown RBP10.02□□□□□ -0.81
NPC1-205ENST00000587163 BIN3Q9NQY0 253 aa10.02□□□□□ -0.81
NPC1-205ENST00000587163 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
NPC1-205ENST00000587163 PDE6DO43924 150 aa10.01□□□□□ -0.81
NPC1-205ENST00000587163 GAGE2BQ13066 116 aa10.01□□□□□ -0.81
NPC1-205ENST00000587163 RPP21Q9H633 154 aaKnown RBP10.01□□□□□ -0.81
NPC1-205ENST00000587163 ZNF561-AS1K7EIQ3 104 aa10□□□□□ -0.81
NPC1-205ENST00000587163 ESDP10768 282 aa10□□□□□ -0.81
NPC1-205ENST00000587163 PMCHP20382 165 aa10□□□□□ -0.81
NPC1-205ENST00000587163 TMEM101Q96IK0 257 aa10□□□□□ -0.81
NPC1-205ENST00000587163 BTF3L4Q96K17 158 aa10□□□□□ -0.81
NPC1-205ENST00000587163 I3L3M4 83 aa9.99□□□□□ -0.81
NPC1-205ENST00000587163 K7EN84 100 aa9.99□□□□□ -0.81
NPC1-205ENST00000587163 TSHBP01222 138 aa9.99□□□□□ -0.81
NPC1-205ENST00000587163 EIF5AP63241 154 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms