RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 IGHV4-4A0A075B6R2 117 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 IGKV1D-37A0A075B6S9 117 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 A0A0J9YWU9 116 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 UBE2L5PA0A1B0GUS4 154 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 NUPR2A6NF83 97 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 ZNF705FA8MVS1 300 aaPredicted RBP3.35□□□□□ -1.87
ZNF540-204ENST00000586792 H3BQ15 152 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 K7EP34 96 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 ISLRO14498 428 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 HYPMO75409 117 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 CST7O76096 145 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 TRGC2P03986 189 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 ZNF705DP0CH99 300 aaPredicted RBP3.35□□□□□ -1.87
ZNF540-204ENST00000586792 ZNF705BP0CI00 300 aaPredicted RBP3.35□□□□□ -1.87
ZNF540-204ENST00000586792 GATA2P23769 480 aaPredicted RBP3.35□□□□□ -1.87
ZNF540-204ENST00000586792 PRR3P79522 188 aaKnown RBP3.35□□□□□ -1.87
ZNF540-204ENST00000586792 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 TMEM14EPQ6UXP3 125 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 TRPT1Q86TN4 253 aaKnown RBP3.35□□□□□ -1.87
ZNF540-204ENST00000586792 C6orf223Q8N319 242 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 ANKRD29Q8N6D5 301 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 STPG4Q8N801 248 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 NDFIP1Q9BT67 221 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 GNB1LQ9BYB4 327 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 KCNIP2Q9NS61 270 aa3.35□□□□□ -1.87
ZNF540-204ENST00000586792 IGKV1OR2-108A0A075B7D4 117 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 TRAV9-2A0A087WT02 112 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 IGHV3-38A0A0C4DH36 116 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 PLAC8L1A1L4L8 177 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 KNCNA6PVL3 124 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 PSPHP1O15172 72 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 DEDDO75618 318 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 FGF6P10767 208 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 HLA-DRB4P13762 266 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 MIFP14174 115 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 SRIP30626 198 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 ASIPP42127 132 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 IL15RAQ13261 267 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 KIAA1644Q3SXP7 199 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 ZNF506Q5JVG8 444 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 C10orf113Q5VZT2 155 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 LINC00305Q7Z4B0 112 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 BPIFA4PQ86YQ2 179 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 ZNF709Q8N972 641 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 FRZBQ92765 325 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 RAB37Q96AX2 223 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 SHANK2-AS3Q9BTD1 123 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 SCRT1Q9BWW7 348 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 KLK5Q9Y337 293 aaPredicted RBP3.34□□□□□ -1.87
ZNF540-204ENST00000586792 HLA-DRB4X5D2U9 266 aa3.34□□□□□ -1.87
ZNF540-204ENST00000586792 TGP01266 2768 aa3.34□□□□□ -1.88
ZNF540-204ENST00000586792 TRAV8-3A0A0A6YYJ7 113 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 TRAV8-1A0A0A6YYK1 113 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 TRAV26-2A0A0B4J265 109 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 FAM24AA6NFZ4 105 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 PMS2P5A8MQ11 134 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 C8orf87E5RJ46 101 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 H3BRM9 83 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 H3BRN7 92 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 DUSP14O95147 198 aaKnown RBP3.33□□□□□ -1.88
ZNF540-204ENST00000586792 IBA57Q5T440 356 aaKnown RBP3.33□□□□□ -1.88
ZNF540-204ENST00000586792 LCN15Q6UWW0 184 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 AMTNQ6UX39 209 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 TMEM252Q8N6L7 170 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 OR5C1Q8NGR4 320 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 PLEKHB2Q96CS7 222 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 SLC50A1Q9BRV3 221 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 TMEM191AQ9H0A3 160 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 GTSF1LQ9H1H1 148 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 C11orf68Q9H3H3 251 aaKnown RBP3.33□□□□□ -1.88
ZNF540-204ENST00000586792 RFNGQ9Y644 331 aa3.33□□□□□ -1.88
ZNF540-204ENST00000586792 IGHV1OR15-1A0A075B7D0 117 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 TRAV1-1A0A0B4J248 108 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 H3BMM0 161 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 ZNF253O75346 499 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 INSP01308 110 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 MT-ND6P03923 174 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 GPX1P07203 203 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 FABP2P12104 132 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 FXYD7P58549 80 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 Q0VG73 95 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 GDF5OSQ5U4N7 250 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 MIC13Q5XKP0 118 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 C11orf72Q8NBR9 251 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 CMTM2Q8TAZ6 248 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 SCGB1C1Q8TD33 95 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 PPP1R1CQ8WVI7 109 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 COPS9Q8WXC6 57 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 MGST2Q99735 147 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 SMIM3Q9BZL3 60 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 ZNF331Q9NQX6 463 aaPredicted RBP3.32□□□□□ -1.88
ZNF540-204ENST00000586792 PXMP4Q9Y6I8 212 aa3.32□□□□□ -1.88
ZNF540-204ENST00000586792 TRAV5A0A0B4J249 113 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 A0A0J9YX75 114 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 A0A0J9YXV3 536 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 LCE6AA0A183 80 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 LOC389332A0A1B0GUA5 103 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 C11orf94C9JXX5 98 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 SOCS3O14543 225 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms