RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 TMEM241Q24JQ0 296 aa12.49□□□□□ -0.41
TPM4-204ENST00000586499 IGLV4-60A0A075B6I1 120 aa12.48□□□□□ -0.41
TPM4-204ENST00000586499 GAS8-AS1O95177 125 aa12.48□□□□□ -0.41
TPM4-204ENST00000586499 RPL23P62829 140 aaKnown RBP12.48□□□□□ -0.41
TPM4-204ENST00000586499 COTL1Q14019 142 aa12.48□□□□□ -0.41
TPM4-204ENST00000586499 MIAQ16674 131 aa12.48□□□□□ -0.41
TPM4-204ENST00000586499 C20orf203Q8NBC4 194 aa12.48□□□□□ -0.41
TPM4-204ENST00000586499 FRZBQ92765 325 aa12.48□□□□□ -0.41
TPM4-204ENST00000586499 ISOC2Q96AB3 205 aa12.48□□□□□ -0.41
TPM4-204ENST00000586499 TMEM70Q9BUB7 260 aa12.48□□□□□ -0.41
TPM4-204ENST00000586499 V9GYV3 84 aa12.48□□□□□ -0.41
TPM4-204ENST00000586499 A0A1B0GUT8 65 aa12.47□□□□□ -0.41
TPM4-204ENST00000586499 EPM2AB3EWF7 344 aa12.47□□□□□ -0.41
TPM4-204ENST00000586499 HLA-DQA1P01909 254 aa12.47□□□□□ -0.41
TPM4-204ENST00000586499 BORCS7Q96B45 105 aa12.47□□□□□ -0.41
TPM4-204ENST00000586499 GFRA4Q9GZZ7 299 aa12.47□□□□□ -0.41
TPM4-204ENST00000586499 AMTP48728 403 aa12.46□□□□□ -0.41
TPM4-204ENST00000586499 PEA15Q15121 130 aa12.46□□□□□ -0.41
TPM4-204ENST00000586499 ADIRFQ15847 76 aa12.46□□□□□ -0.41
TPM4-204ENST00000586499 FAM74A3Q4VXF1 159 aa12.46□□□□□ -0.41
TPM4-204ENST00000586499 KRTAP26-1Q6PEX3 210 aa12.46□□□□□ -0.41
TPM4-204ENST00000586499 IGLV10-54A0A075B6I4 117 aa12.45□□□□□ -0.42
TPM4-204ENST00000586499 FAM231BA6NCW3 169 aa12.45□□□□□ -0.42
TPM4-204ENST00000586499 REG3AQ06141 175 aa12.45□□□□□ -0.42
TPM4-204ENST00000586499 NUP35Q8NFH5 326 aa12.45□□□□□ -0.42
TPM4-204ENST00000586499 NAT8Q9UHE5 227 aa12.45□□□□□ -0.42
TPM4-204ENST00000586499 A0A1B0GUV1 79 aa12.44□□□□□ -0.42
TPM4-204ENST00000586499 SDHAF1A6NFY7 115 aa12.44□□□□□ -0.42
TPM4-204ENST00000586499 UBE2L6O14933 153 aa12.44□□□□□ -0.42
TPM4-204ENST00000586499 Q5VSD8 79 aa12.44□□□□□ -0.42
TPM4-204ENST00000586499 RNF185Q96GF1 192 aa12.44□□□□□ -0.42
TPM4-204ENST00000586499 TMEM191AQ9H0A3 160 aa12.44□□□□□ -0.42
TPM4-204ENST00000586499 USP17L23D6RBM5 183 aa12.43□□□□□ -0.42
TPM4-204ENST00000586499 RAB4AP20338 218 aa12.42□□□□□ -0.42
TPM4-204ENST00000586499 AMN1Q8IY45 258 aa12.42□□□□□ -0.42
TPM4-204ENST00000586499 RPS10P46783 165 aaKnown RBP12.41□□□□□ -0.42
TPM4-204ENST00000586499 Q6ZSA8 131 aa12.41□□□□□ -0.42
TPM4-204ENST00000586499 SMDT1Q9H4I9 107 aa12.41□□□□□ -0.42
TPM4-204ENST00000586499 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.4□□□□□ -0.42
TPM4-204ENST00000586499 TRBV6-5A0A0K0K1A5 114 aa12.4□□□□□ -0.42
TPM4-204ENST00000586499 IGKV2-29A2NJV5 120 aaPredicted RBP12.4□□□□□ -0.42
TPM4-204ENST00000586499 PRSS1P07477 247 aa12.4□□□□□ -0.42
TPM4-204ENST00000586499 PMCHP20382 165 aa12.4□□□□□ -0.42
TPM4-204ENST00000586499 C14orf177Q52M58 125 aa12.4□□□□□ -0.42
TPM4-204ENST00000586499 SMKR1H3BMG3 65 aa12.39□□□□□ -0.43
TPM4-204ENST00000586499 I3L3M4 83 aa12.39□□□□□ -0.43
TPM4-204ENST00000586499 NCR2O95944 276 aa12.39□□□□□ -0.43
TPM4-204ENST00000586499 APCSP02743 223 aa12.39□□□□□ -0.43
TPM4-204ENST00000586499 RIGQ13278 110 aa12.39□□□□□ -0.43
TPM4-204ENST00000586499 ST20Q9HBF5 79 aa12.39□□□□□ -0.43
TPM4-204ENST00000586499 NAT8BQ9UHF3 227 aa12.39□□□□□ -0.43
TPM4-204ENST00000586499 TRAV8-4A0A0B4J246 113 aa12.38□□□□□ -0.43
TPM4-204ENST00000586499 IGKV3OR2-268A0A0C4DH90 116 aa12.37□□□□□ -0.43
TPM4-204ENST00000586499 SMIM27A0A1W2PRY6 76 aa12.37□□□□□ -0.43
TPM4-204ENST00000586499 TSHBP01222 138 aa12.37□□□□□ -0.43
TPM4-204ENST00000586499 AMMECR1LQ6DCA0 310 aa12.37□□□□□ -0.43
TPM4-204ENST00000586499 RNASEKQ6P5S7 137 aaKnown RBP12.37□□□□□ -0.43
TPM4-204ENST00000586499 MRAP2Q96G30 205 aa12.37□□□□□ -0.43
TPM4-204ENST00000586499 TMEM242Q9NWH2 141 aa12.37□□□□□ -0.43
TPM4-204ENST00000586499 FGF6P10767 208 aa12.36□□□□□ -0.43
TPM4-204ENST00000586499 POLR2KP53803 58 aaKnown RBP12.36□□□□□ -0.43
TPM4-204ENST00000586499 SRRM2Q9UQ35 2752 aaKnown RBP12.35□□□□□ -0.43
TPM4-204ENST00000586499 FAM229AH3BQW9 127 aa12.35□□□□□ -0.43
TPM4-204ENST00000586499 INAFM2P0DMQ5 153 aa12.35□□□□□ -0.43
TPM4-204ENST00000586499 CAMPP49913 170 aa12.35□□□□□ -0.43
TPM4-204ENST00000586499 VPS13BQ7Z7G8 4022 aa12.35□□□□□ -0.43
TPM4-204ENST00000586499 ESDP10768 282 aa12.34□□□□□ -0.43
TPM4-204ENST00000586499 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
TPM4-204ENST00000586499 H7C423 109 aa12.33□□□□□ -0.44
TPM4-204ENST00000586499 MRPL51Q4U2R6 128 aaKnown RBP12.33□□□□□ -0.44
TPM4-204ENST00000586499 NRACQ8N912 160 aa12.33□□□□□ -0.44
TPM4-204ENST00000586499 TRBV27A0A0K0K1C4 114 aa12.32□□□□□ -0.44
TPM4-204ENST00000586499 GAGE12HA6NDE8 117 aa12.32□□□□□ -0.44
TPM4-204ENST00000586499 FAM104BQ5XKR9 115 aa12.32□□□□□ -0.44
TPM4-204ENST00000586499 DGAT2L7PQ6IED9 249 aa12.32□□□□□ -0.44
TPM4-204ENST00000586499 MRPL54Q6P161 138 aaKnown RBP12.31□□□□□ -0.44
TPM4-204ENST00000586499 CHAC1Q9BUX1 264 aa12.31□□□□□ -0.44
TPM4-204ENST00000586499 hDV102S1A0JD36 115 aa12.3□□□□□ -0.44
TPM4-204ENST00000586499 VCYO14598 125 aa12.3□□□□□ -0.44
TPM4-204ENST00000586499 C9orf163Q8N9P6 203 aa12.3□□□□□ -0.44
TPM4-204ENST00000586499 CLRN3Q8NCR9 226 aa12.3□□□□□ -0.44
TPM4-204ENST00000586499 CIRBP-AS1Q8TBR5 109 aa12.3□□□□□ -0.44
TPM4-204ENST00000586499 CHCHD10Q8WYQ3 142 aaPredicted RBP12.3□□□□□ -0.44
TPM4-204ENST00000586499 SLPIP03973 132 aa12.29□□□□□ -0.44
TPM4-204ENST00000586499 ZNF25P17030 456 aaPredicted RBP12.29□□□□□ -0.44
TPM4-204ENST00000586499 RAB14P61106 215 aa12.29□□□□□ -0.44
TPM4-204ENST00000586499 SUMO2P61956 95 aaKnown RBP12.29□□□□□ -0.44
TPM4-204ENST00000586499 LINC00528Q8N1L1 170 aa12.29□□□□□ -0.44
TPM4-204ENST00000586499 BTF3L4Q96K17 158 aa12.29□□□□□ -0.44
TPM4-204ENST00000586499 TMEM101Q96IK0 257 aa12.28□□□□□ -0.44
TPM4-204ENST00000586499 A0A1B0GW15 77 aa12.27□□□□□ -0.45
TPM4-204ENST00000586499 A0A1B0GXF2 115 aa12.27□□□□□ -0.45
TPM4-204ENST00000586499 FCER1GP30273 86 aa12.27□□□□□ -0.45
TPM4-204ENST00000586499 CKS2P33552 79 aa12.27□□□□□ -0.45
TPM4-204ENST00000586499 C15orf56Q8N910 161 aa12.27□□□□□ -0.45
TPM4-204ENST00000586499 OR5A1Q8NGJ0 315 aa12.27□□□□□ -0.45
TPM4-204ENST00000586499 C7orf77A4D0Y5 90 aa12.26□□□□□ -0.45
TPM4-204ENST00000586499 PPP1R17O96001 155 aa12.26□□□□□ -0.45
TPM4-204ENST00000586499 HBBP68871 147 aa12.26□□□□□ -0.45
TPM4-204ENST00000586499 LINC00959A0A1B0GUT2 108 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms