RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 CLRN3Q8NCR9 226 aa11.01□□□□□ -0.65
TRIM47-203ENST00000586495 TMEM250H0YL14 139 aa11□□□□□ -0.65
TRIM47-203ENST00000586495 K7EN84 100 aa11□□□□□ -0.65
TRIM47-203ENST00000586495 SMIM15Q7Z3B0 74 aa11□□□□□ -0.65
TRIM47-203ENST00000586495 IGLV10-54A0A075B6I4 117 aa10.99□□□□□ -0.65
TRIM47-203ENST00000586495 AMTP48728 403 aa10.99□□□□□ -0.65
TRIM47-203ENST00000586495 C9orf163Q8N9P6 203 aa10.99□□□□□ -0.65
TRIM47-203ENST00000586495 HERC1Q15751 4861 aa10.98□□□□□ -0.65
TRIM47-203ENST00000586495 IGLV4-60A0A075B6I1 120 aa10.98□□□□□ -0.65
TRIM47-203ENST00000586495 GATCO43716 136 aaKnown RBP10.98□□□□□ -0.65
TRIM47-203ENST00000586495 ALKAL2Q6UX46 152 aa10.98□□□□□ -0.65
TRIM47-203ENST00000586495 MYCBP2O75592 4640 aa10.98□□□□□ -0.65
TRIM47-203ENST00000586495 GATD1Q8NB37 220 aa10.97□□□□□ -0.65
TRIM47-203ENST00000586495 A8MWL6 223 aa10.96□□□□□ -0.65
TRIM47-203ENST00000586495 KRTAP29-1A8MX34 341 aaPredicted RBP10.96□□□□□ -0.65
TRIM47-203ENST00000586495 TEX261Q6UWH6 196 aa10.96□□□□□ -0.65
TRIM47-203ENST00000586495 FAM231DQ6ZW35 169 aa10.96□□□□□ -0.65
TRIM47-203ENST00000586495 LYPD6BQ8NI32 183 aa10.96□□□□□ -0.65
TRIM47-203ENST00000586495 TRAV26-2A0A0B4J265 109 aa10.95□□□□□ -0.66
TRIM47-203ENST00000586495 GTSF1Q8WW33 167 aa10.95□□□□□ -0.66
TRIM47-203ENST00000586495 GFRA4Q9GZZ7 299 aa10.95□□□□□ -0.66
TRIM47-203ENST00000586495 AP5S1Q9NUS5 200 aa10.95□□□□□ -0.66
TRIM47-203ENST00000586495 hCG_2014768A0A024R1R8 64 aa10.94□□□□□ -0.66
TRIM47-203ENST00000586495 hDV102S1A0JD36 115 aa10.94□□□□□ -0.66
TRIM47-203ENST00000586495 NCR2O95944 276 aa10.94□□□□□ -0.66
TRIM47-203ENST00000586495 CEBPGP53567 150 aa10.94□□□□□ -0.66
TRIM47-203ENST00000586495 BORCS7Q96B45 105 aa10.94□□□□□ -0.66
TRIM47-203ENST00000586495 CNBPP62633 177 aaKnown RBP10.93□□□□□ -0.66
TRIM47-203ENST00000586495 CT83Q5H943 113 aa10.93□□□□□ -0.66
TRIM47-203ENST00000586495 AMMECR1LQ6DCA0 310 aa10.93□□□□□ -0.66
TRIM47-203ENST00000586495 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.92□□□□□ -0.66
TRIM47-203ENST00000586495 H7C423 109 aa10.92□□□□□ -0.66
TRIM47-203ENST00000586495 FOXA3P55318 350 aaPredicted RBP10.92□□□□□ -0.66
TRIM47-203ENST00000586495 KRTAP10-4P60372 401 aaPredicted RBP10.92□□□□□ -0.66
TRIM47-203ENST00000586495 SDIM1Q6ZPB5 146 aa10.92□□□□□ -0.66
TRIM47-203ENST00000586495 RPL39LQ96EH5 51 aaKnown RBP10.92□□□□□ -0.66
TRIM47-203ENST00000586495 EIF5A2Q9GZV4 153 aaKnown RBP10.92□□□□□ -0.66
TRIM47-203ENST00000586495 SDHAF1A6NFY7 115 aa10.91□□□□□ -0.66
TRIM47-203ENST00000586495 NDUFS6O75380 124 aaKnown RBP10.91□□□□□ -0.66
TRIM47-203ENST00000586495 APCSP02743 223 aa10.91□□□□□ -0.66
TRIM47-203ENST00000586495 RPL37AP61513 92 aaKnown RBP10.91□□□□□ -0.66
TRIM47-203ENST00000586495 CFAP161Q6P656 301 aa10.91□□□□□ -0.66
TRIM47-203ENST00000586495 IGHV3-64A0A075B6Q5 118 aa10.9□□□□□ -0.66
TRIM47-203ENST00000586495 IGKV3OR2-268A0A0C4DH90 116 aa10.9□□□□□ -0.66
TRIM47-203ENST00000586495 RNASEKQ6P5S7 137 aaKnown RBP10.9□□□□□ -0.66
TRIM47-203ENST00000586495 SMIM7Q9BQ49 75 aa10.9□□□□□ -0.66
TRIM47-203ENST00000586495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.9□□□□□ -0.66
TRIM47-203ENST00000586495 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
TRIM47-203ENST00000586495 PMCHP20382 165 aa10.89□□□□□ -0.67
TRIM47-203ENST00000586495 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.88□□□□□ -0.67
TRIM47-203ENST00000586495 TRBV6-5A0A0K0K1A5 114 aa10.88□□□□□ -0.67
TRIM47-203ENST00000586495 IGKV2-29A2NJV5 120 aaPredicted RBP10.88□□□□□ -0.67
TRIM47-203ENST00000586495 I3L3M4 83 aa10.88□□□□□ -0.67
TRIM47-203ENST00000586495 OXTP01178 125 aa10.88□□□□□ -0.67
TRIM47-203ENST00000586495 FGF6P10767 208 aa10.88□□□□□ -0.67
TRIM47-203ENST00000586495 LINC01551Q86U37 167 aa10.88□□□□□ -0.67
TRIM47-203ENST00000586495 TSKUQ8WUA8 353 aa10.88□□□□□ -0.67
TRIM47-203ENST00000586495 FAM210AQ96ND0 272 aa10.88□□□□□ -0.67
TRIM47-203ENST00000586495 A0A1B0GUT8 65 aa10.87□□□□□ -0.67
TRIM47-203ENST00000586495 FAM231BA6NCW3 169 aa10.87□□□□□ -0.67
TRIM47-203ENST00000586495 ZNF727A8MUV8 499 aa10.87□□□□□ -0.67
TRIM47-203ENST00000586495 ZNF25P17030 456 aaPredicted RBP10.87□□□□□ -0.67
TRIM47-203ENST00000586495 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
TRIM47-203ENST00000586495 BTF3L4Q96K17 158 aa10.87□□□□□ -0.67
TRIM47-203ENST00000586495 OSTCQ9NRP0 149 aa10.87□□□□□ -0.67
TRIM47-203ENST00000586495 HIGD1CA8MV81 97 aa10.86□□□□□ -0.67
TRIM47-203ENST00000586495 PANO1I0J062 215 aa10.86□□□□□ -0.67
TRIM47-203ENST00000586495 CIRBPQ14011 172 aaKnown RBP10.86□□□□□ -0.67
TRIM47-203ENST00000586495 CHCHD10Q8WYQ3 142 aaPredicted RBP10.86□□□□□ -0.67
TRIM47-203ENST00000586495 TMEM101Q96IK0 257 aa10.86□□□□□ -0.67
TRIM47-203ENST00000586495 TMEM191AQ9H0A3 160 aa10.86□□□□□ -0.67
TRIM47-203ENST00000586495 ST20Q9HBF5 79 aa10.86□□□□□ -0.67
TRIM47-203ENST00000586495 SLPIP03973 132 aa10.85□□□□□ -0.67
TRIM47-203ENST00000586495 C15orf56Q8N910 161 aa10.85□□□□□ -0.67
TRIM47-203ENST00000586495 RNF185Q96GF1 192 aa10.85□□□□□ -0.67
TRIM47-203ENST00000586495 SRP19P09132 144 aaKnown RBP10.84□□□□□ -0.67
TRIM47-203ENST00000586495 OR5A1Q8NGJ0 315 aa10.84□□□□□ -0.67
TRIM47-203ENST00000586495 MRAP2Q96G30 205 aa10.84□□□□□ -0.67
TRIM47-203ENST00000586495 RPS10P46783 165 aaKnown RBP10.83□□□□□ -0.68
TRIM47-203ENST00000586495 RIGQ13278 110 aa10.83□□□□□ -0.68
TRIM47-203ENST00000586495 ESDP10768 282 aa10.82□□□□□ -0.68
TRIM47-203ENST00000586495 RAB4AP20338 218 aa10.82□□□□□ -0.68
TRIM47-203ENST00000586495 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
TRIM47-203ENST00000586495 TMEM242Q9NWH2 141 aa10.82□□□□□ -0.68
TRIM47-203ENST00000586495 A0A087WYN8 130 aa10.81□□□□□ -0.68
TRIM47-203ENST00000586495 GAS8-AS1O95177 125 aa10.81□□□□□ -0.68
TRIM47-203ENST00000586495 TSHBP01222 138 aa10.81□□□□□ -0.68
TRIM47-203ENST00000586495 POLR2KP53803 58 aaKnown RBP10.81□□□□□ -0.68
TRIM47-203ENST00000586495 FAM74A3Q4VXF1 159 aa10.81□□□□□ -0.68
TRIM47-203ENST00000586495 AMN1Q8IY45 258 aa10.81□□□□□ -0.68
TRIM47-203ENST00000586495 SPACA4Q8TDM5 124 aa10.81□□□□□ -0.68
TRIM47-203ENST00000586495 TRBV27A0A0K0K1C4 114 aa10.8□□□□□ -0.68
TRIM47-203ENST00000586495 PPP1R17O96001 155 aa10.8□□□□□ -0.68
TRIM47-203ENST00000586495 CHTF8P0CG12 524 aa10.8□□□□□ -0.68
TRIM47-203ENST00000586495 TMEM241Q24JQ0 296 aa10.8□□□□□ -0.68
TRIM47-203ENST00000586495 SERTAD4-AS1Q5TG53 156 aa10.8□□□□□ -0.68
TRIM47-203ENST00000586495 V9GYV3 84 aa10.8□□□□□ -0.68
TRIM47-203ENST00000586495 GVQW2A0A096LPI5 108 aaPredicted RBP10.79□□□□□ -0.68
TRIM47-203ENST00000586495 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
TRIM47-203ENST00000586495 C7orf77A4D0Y5 90 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms