RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 TWIST1Q15672 202 aa11.03□□□□□ -0.64
MBD3-204ENST00000585967 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
MBD3-204ENST00000585967 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.65
MBD3-204ENST00000585967 TEX261Q6UWH6 196 aa11.02□□□□□ -0.65
MBD3-204ENST00000585967 CNFNQ9BYD5 112 aa11.02□□□□□ -0.65
MBD3-204ENST00000585967 TRBV20OR9-2A0A075B6H5 130 aa11.01□□□□□ -0.65
MBD3-204ENST00000585967 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
MBD3-204ENST00000585967 C20orf203Q8NBC4 194 aa11.01□□□□□ -0.65
MBD3-204ENST00000585967 NUDT10Q8NFP7 164 aa11.01□□□□□ -0.65
MBD3-204ENST00000585967 NUDT11Q96G61 164 aa11.01□□□□□ -0.65
MBD3-204ENST00000585967 IGHV3-64A0A075B6Q5 118 aa11□□□□□ -0.65
MBD3-204ENST00000585967 AMMECR1LQ6DCA0 310 aa11□□□□□ -0.65
MBD3-204ENST00000585967 CFAP161Q6P656 301 aa11□□□□□ -0.65
MBD3-204ENST00000585967 NCR2O95944 276 aa10.99□□□□□ -0.65
MBD3-204ENST00000585967 KRTAP26-1Q6PEX3 210 aa10.99□□□□□ -0.65
MBD3-204ENST00000585967 BORCS7Q96B45 105 aa10.99□□□□□ -0.65
MBD3-204ENST00000585967 IGLV4-60A0A075B6I1 120 aa10.97□□□□□ -0.65
MBD3-204ENST00000585967 TMEM250H0YL14 139 aa10.97□□□□□ -0.65
MBD3-204ENST00000585967 H7C423 109 aa10.97□□□□□ -0.65
MBD3-204ENST00000585967 APCSP02743 223 aa10.97□□□□□ -0.65
MBD3-204ENST00000585967 BLOC1S1P78537 153 aa10.97□□□□□ -0.65
MBD3-204ENST00000585967 DPH3Q96FX2 82 aa10.97□□□□□ -0.65
MBD3-204ENST00000585967 RNF185Q96GF1 192 aa10.97□□□□□ -0.65
MBD3-204ENST00000585967 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
MBD3-204ENST00000585967 KRTAP10-4P60372 401 aaPredicted RBP10.96□□□□□ -0.65
MBD3-204ENST00000585967 PKIGQ9Y2B9 76 aa10.96□□□□□ -0.65
MBD3-204ENST00000585967 A8MWL6 223 aa10.95□□□□□ -0.66
MBD3-204ENST00000585967 GATCO43716 136 aaKnown RBP10.95□□□□□ -0.66
MBD3-204ENST00000585967 RNASEKQ6P5S7 137 aaKnown RBP10.95□□□□□ -0.66
MBD3-204ENST00000585967 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
MBD3-204ENST00000585967 GATD1Q8NB37 220 aa10.95□□□□□ -0.66
MBD3-204ENST00000585967 OCC1Q8TAD7 63 aa10.95□□□□□ -0.66
MBD3-204ENST00000585967 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
MBD3-204ENST00000585967 FAM210AQ96ND0 272 aa10.95□□□□□ -0.66
MBD3-204ENST00000585967 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.95□□□□□ -0.66
MBD3-204ENST00000585967 ZNF25P17030 456 aaPredicted RBP10.94□□□□□ -0.66
MBD3-204ENST00000585967 PKHD1L1Q86WI1 4243 aa10.94□□□□□ -0.66
MBD3-204ENST00000585967 TRAV26-2A0A0B4J265 109 aa10.93□□□□□ -0.66
MBD3-204ENST00000585967 IGKV3OR2-268A0A0C4DH90 116 aa10.93□□□□□ -0.66
MBD3-204ENST00000585967 K7EN84 100 aa10.93□□□□□ -0.66
MBD3-204ENST00000585967 CT83Q5H943 113 aa10.93□□□□□ -0.66
MBD3-204ENST00000585967 FAM231DQ6ZW35 169 aa10.93□□□□□ -0.66
MBD3-204ENST00000585967 AKAP14Q86UN6 197 aa10.93□□□□□ -0.66
MBD3-204ENST00000585967 TMEM101Q96IK0 257 aa10.93□□□□□ -0.66
MBD3-204ENST00000585967 GAGE12HA6NDE8 117 aa10.92□□□□□ -0.66
MBD3-204ENST00000585967 SDHAF1A6NFY7 115 aa10.92□□□□□ -0.66
MBD3-204ENST00000585967 CIRBPQ14011 172 aaKnown RBP10.92□□□□□ -0.66
MBD3-204ENST00000585967 GFRA4Q9GZZ7 299 aa10.92□□□□□ -0.66
MBD3-204ENST00000585967 I3L3M4 83 aa10.91□□□□□ -0.66
MBD3-204ENST00000585967 C7orf33Q8WU49 177 aa10.91□□□□□ -0.66
MBD3-204ENST00000585967 GTSF1Q8WW33 167 aa10.91□□□□□ -0.66
MBD3-204ENST00000585967 LRP1Q07954 4544 aaKnown RBP10.91□□□□□ -0.66
MBD3-204ENST00000585967 PMCHP20382 165 aa10.9□□□□□ -0.66
MBD3-204ENST00000585967 RPS10P46783 165 aaKnown RBP10.9□□□□□ -0.66
MBD3-204ENST00000585967 CEBPGP53567 150 aa10.9□□□□□ -0.66
MBD3-204ENST00000585967 RPL39LQ96EH5 51 aaKnown RBP10.9□□□□□ -0.66
MBD3-204ENST00000585967 FAT3Q8TDW7 4589 aa10.9□□□□□ -0.67
MBD3-204ENST00000585967 FGF6P10767 208 aa10.89□□□□□ -0.67
MBD3-204ENST00000585967 ALKAL2Q6UX46 152 aa10.89□□□□□ -0.67
MBD3-204ENST00000585967 Q6ZNX1 250 aa10.89□□□□□ -0.67
MBD3-204ENST00000585967 CHCHD10Q8WYQ3 142 aaPredicted RBP10.89□□□□□ -0.67
MBD3-204ENST00000585967 MRAP2Q96G30 205 aa10.89□□□□□ -0.67
MBD3-204ENST00000585967 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.88□□□□□ -0.67
MBD3-204ENST00000585967 IGKV2-29A2NJV5 120 aaPredicted RBP10.88□□□□□ -0.67
MBD3-204ENST00000585967 NDUFS6O75380 124 aaKnown RBP10.88□□□□□ -0.67
MBD3-204ENST00000585967 SMAGPQ0VAQ4 97 aa10.88□□□□□ -0.67
MBD3-204ENST00000585967 C15orf56Q8N910 161 aa10.88□□□□□ -0.67
MBD3-204ENST00000585967 SPACA4Q8TDM5 124 aa10.88□□□□□ -0.67
MBD3-204ENST00000585967 SMIM7Q9BQ49 75 aa10.88□□□□□ -0.67
MBD3-204ENST00000585967 EIF5A2Q9GZV4 153 aaKnown RBP10.88□□□□□ -0.67
MBD3-204ENST00000585967 ST20Q9HBF5 79 aa10.88□□□□□ -0.67
MBD3-204ENST00000585967 A0A087WYN8 130 aa10.87□□□□□ -0.67
MBD3-204ENST00000585967 TRBV6-5A0A0K0K1A5 114 aa10.87□□□□□ -0.67
MBD3-204ENST00000585967 A0A1B0GUT8 65 aa10.87□□□□□ -0.67
MBD3-204ENST00000585967 FAM231BA6NCW3 169 aa10.87□□□□□ -0.67
MBD3-204ENST00000585967 Q6ZRU5 148 aa10.87□□□□□ -0.67
MBD3-204ENST00000585967 OR5A1Q8NGJ0 315 aa10.87□□□□□ -0.67
MBD3-204ENST00000585967 GVQW2A0A096LPI5 108 aaPredicted RBP10.86□□□□□ -0.67
MBD3-204ENST00000585967 PANO1I0J062 215 aa10.86□□□□□ -0.67
MBD3-204ENST00000585967 PPP1R17O96001 155 aa10.86□□□□□ -0.67
MBD3-204ENST00000585967 FOXA3P55318 350 aaPredicted RBP10.86□□□□□ -0.67
MBD3-204ENST00000585967 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
MBD3-204ENST00000585967 LINC00474Q9P2X8 69 aa10.86□□□□□ -0.67
MBD3-204ENST00000585967 PLA2G2DQ9UNK4 145 aa10.86□□□□□ -0.67
MBD3-204ENST00000585967 HIGD1CA8MV81 97 aa10.85□□□□□ -0.67
MBD3-204ENST00000585967 HIGD2BQ4VC39 106 aa10.85□□□□□ -0.67
MBD3-204ENST00000585967 LYPD6BQ8NI32 183 aa10.85□□□□□ -0.67
MBD3-204ENST00000585967 TMEM191AQ9H0A3 160 aa10.85□□□□□ -0.67
MBD3-204ENST00000585967 CHTF8P0CG12 524 aa10.84□□□□□ -0.67
MBD3-204ENST00000585967 COX6A2Q02221 97 aa10.84□□□□□ -0.67
MBD3-204ENST00000585967 SS18Q15532 418 aa10.84□□□□□ -0.67
MBD3-204ENST00000585967 PLAC8Q9NZF1 115 aa10.84□□□□□ -0.67
MBD3-204ENST00000585967 IGHV1-58A0A0C4DH39 117 aa10.83□□□□□ -0.68
MBD3-204ENST00000585967 C7orf77A4D0Y5 90 aa10.83□□□□□ -0.68
MBD3-204ENST00000585967 ZNF727A8MUV8 499 aa10.83□□□□□ -0.68
MBD3-204ENST00000585967 SLPIP03973 132 aa10.83□□□□□ -0.68
MBD3-204ENST00000585967 XCL1P47992 114 aa10.83□□□□□ -0.68
MBD3-204ENST00000585967 MAJINQ3KP22 176 aa10.83□□□□□ -0.68
MBD3-204ENST00000585967 OSTCQ9NRP0 149 aa10.83□□□□□ -0.68
MBD3-204ENST00000585967 IGKV2-24A0A0C4DH68 120 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms