RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 NIT2Q9NQR4 276 aa8.67□□□□□ -1.02
PRKCSH-201ENST00000585325 TMEM250H0YL14 139 aa8.66□□□□□ -1.02
PRKCSH-201ENST00000585325 UBE2L6O14933 153 aa8.66□□□□□ -1.02
PRKCSH-201ENST00000585325 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
PRKCSH-201ENST00000585325 KRTAP26-1Q6PEX3 210 aa8.66□□□□□ -1.02
PRKCSH-201ENST00000585325 C20orf203Q8NBC4 194 aa8.66□□□□□ -1.02
PRKCSH-201ENST00000585325 OCC1Q8TAD7 63 aa8.66□□□□□ -1.02
PRKCSH-201ENST00000585325 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
PRKCSH-201ENST00000585325 K7EN84 100 aa8.65□□□□□ -1.02
PRKCSH-201ENST00000585325 AMTP48728 403 aa8.65□□□□□ -1.02
PRKCSH-201ENST00000585325 COTL1Q14019 142 aa8.65□□□□□ -1.02
PRKCSH-201ENST00000585325 WDR73Q6P4I2 378 aa8.65□□□□□ -1.02
PRKCSH-201ENST00000585325 PGLYRP4Q96LB8 373 aa8.65□□□□□ -1.02
PRKCSH-201ENST00000585325 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
PRKCSH-201ENST00000585325 A0A1B0GUV1 79 aa8.64□□□□□ -1.03
PRKCSH-201ENST00000585325 GATCO43716 136 aaKnown RBP8.64□□□□□ -1.03
PRKCSH-201ENST00000585325 SMIM15Q7Z3B0 74 aa8.64□□□□□ -1.03
PRKCSH-201ENST00000585325 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
PRKCSH-201ENST00000585325 CLRN3Q8NCR9 226 aa8.64□□□□□ -1.03
PRKCSH-201ENST00000585325 PLA2G2DQ9UNK4 145 aa8.64□□□□□ -1.03
PRKCSH-201ENST00000585325 TRAV26-2A0A0B4J265 109 aa8.63□□□□□ -1.03
PRKCSH-201ENST00000585325 hDV102S1A0JD36 115 aa8.63□□□□□ -1.03
PRKCSH-201ENST00000585325 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
PRKCSH-201ENST00000585325 GATD1Q8NB37 220 aa8.63□□□□□ -1.03
PRKCSH-201ENST00000585325 SMIM7Q9BQ49 75 aa8.63□□□□□ -1.03
PRKCSH-201ENST00000585325 CNFNQ9BYD5 112 aa8.63□□□□□ -1.03
PRKCSH-201ENST00000585325 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
PRKCSH-201ENST00000585325 LYPD6BQ8NI32 183 aa8.62□□□□□ -1.03
PRKCSH-201ENST00000585325 BORCS7Q96B45 105 aa8.62□□□□□ -1.03
PRKCSH-201ENST00000585325 FAM210AQ96ND0 272 aa8.62□□□□□ -1.03
PRKCSH-201ENST00000585325 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
PRKCSH-201ENST00000585325 A8MWL6 223 aa8.61□□□□□ -1.03
PRKCSH-201ENST00000585325 RPL37AP61513 92 aaKnown RBP8.61□□□□□ -1.03
PRKCSH-201ENST00000585325 GTSF1Q8WW33 167 aa8.61□□□□□ -1.03
PRKCSH-201ENST00000585325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
PRKCSH-201ENST00000585325 IGKV3OR2-268A0A0C4DH90 116 aa8.6□□□□□ -1.03
PRKCSH-201ENST00000585325 FOXA3P55318 350 aaPredicted RBP8.6□□□□□ -1.03
PRKCSH-201ENST00000585325 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
PRKCSH-201ENST00000585325 AP5S1Q9NUS5 200 aa8.6□□□□□ -1.03
PRKCSH-201ENST00000585325 PANO1I0J062 215 aa8.59□□□□□ -1.03
PRKCSH-201ENST00000585325 CNBPP62633 177 aaKnown RBP8.59□□□□□ -1.03
PRKCSH-201ENST00000585325 AMMECR1LQ6DCA0 310 aa8.59□□□□□ -1.03
PRKCSH-201ENST00000585325 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
PRKCSH-201ENST00000585325 FAM231DQ6ZW35 169 aa8.59□□□□□ -1.03
PRKCSH-201ENST00000585325 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
PRKCSH-201ENST00000585325 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
PRKCSH-201ENST00000585325 GAGE12HA6NDE8 117 aa8.58□□□□□ -1.04
PRKCSH-201ENST00000585325 APCSP02743 223 aa8.58□□□□□ -1.04
PRKCSH-201ENST00000585325 RNASEKQ6P5S7 137 aaKnown RBP8.58□□□□□ -1.04
PRKCSH-201ENST00000585325 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
PRKCSH-201ENST00000585325 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
PRKCSH-201ENST00000585325 NCR2O95944 276 aa8.57□□□□□ -1.04
PRKCSH-201ENST00000585325 SRP19P09132 144 aaKnown RBP8.57□□□□□ -1.04
PRKCSH-201ENST00000585325 TEX261Q6UWH6 196 aa8.57□□□□□ -1.04
PRKCSH-201ENST00000585325 LINC01551Q86U37 167 aa8.57□□□□□ -1.04
PRKCSH-201ENST00000585325 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
PRKCSH-201ENST00000585325 NDUFS6O75380 124 aaKnown RBP8.56□□□□□ -1.04
PRKCSH-201ENST00000585325 OXTP01178 125 aa8.56□□□□□ -1.04
PRKCSH-201ENST00000585325 CT83Q5H943 113 aa8.56□□□□□ -1.04
PRKCSH-201ENST00000585325 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
PRKCSH-201ENST00000585325 LRP1Q07954 4544 aaKnown RBP8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 H7C423 109 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 SLPIP03973 132 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 FGF6P10767 208 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 PMCHP20382 165 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 PEA15Q15121 130 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 ADIRFQ15847 76 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 TMEM241Q24JQ0 296 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 CFAP161Q6P656 301 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 TSKUQ8WUA8 353 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 FAT3Q8TDW7 4589 aa8.55□□□□□ -1.04
PRKCSH-201ENST00000585325 A0A1B0GUT8 65 aa8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 HIGD1CA8MV81 97 aa8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 I3L3M4 83 aa8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 CHTF8P0CG12 524 aa8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 HNRNPA3P51991 378 aaKnown RBP8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 CIRBPQ14011 172 aaKnown RBP8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 FAM74A3Q4VXF1 159 aa8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 CHCHD10Q8WYQ3 142 aaPredicted RBP8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 OSTCQ9NRP0 149 aa8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
PRKCSH-201ENST00000585325 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
PRKCSH-201ENST00000585325 GAS8-AS1O95177 125 aa8.53□□□□□ -1.04
PRKCSH-201ENST00000585325 TMEM101Q96IK0 257 aa8.53□□□□□ -1.04
PRKCSH-201ENST00000585325 BTF3L4Q96K17 158 aa8.53□□□□□ -1.04
PRKCSH-201ENST00000585325 ST20Q9HBF5 79 aa8.53□□□□□ -1.04
PRKCSH-201ENST00000585325 A0A087WYN8 130 aa8.52□□□□□ -1.05
PRKCSH-201ENST00000585325 ZNF25P17030 456 aaPredicted RBP8.52□□□□□ -1.05
PRKCSH-201ENST00000585325 SPACA4Q8TDM5 124 aa8.52□□□□□ -1.05
PRKCSH-201ENST00000585325 TMEM242Q9NWH2 141 aa8.52□□□□□ -1.05
PRKCSH-201ENST00000585325 NAT8Q9UHE5 227 aa8.52□□□□□ -1.05
PRKCSH-201ENST00000585325 FAM231BA6NCW3 169 aa8.51□□□□□ -1.05
PRKCSH-201ENST00000585325 TSHBP01222 138 aa8.51□□□□□ -1.05
PRKCSH-201ENST00000585325 RPS10P46783 165 aaKnown RBP8.51□□□□□ -1.05
PRKCSH-201ENST00000585325 RPL23P62829 140 aaKnown RBP8.51□□□□□ -1.05
PRKCSH-201ENST00000585325 COX6A2Q02221 97 aa8.51□□□□□ -1.05
PRKCSH-201ENST00000585325 RIGQ13278 110 aa8.51□□□□□ -1.05
PRKCSH-201ENST00000585325 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms