RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 FAM210AQ96ND0 272 aa11.68□□□□□ -0.54
SRSF1-209ENST00000585096 DNAH8Q96JB1 4490 aa11.67□□□□□ -0.54
SRSF1-209ENST00000585096 TRAV26-2A0A0B4J265 109 aa11.67□□□□□ -0.54
SRSF1-209ENST00000585096 USP17L23D6RBM5 183 aa11.67□□□□□ -0.54
SRSF1-209ENST00000585096 FOXA3P55318 350 aaPredicted RBP11.67□□□□□ -0.54
SRSF1-209ENST00000585096 TRAV8-4A0A0B4J246 113 aa11.66□□□□□ -0.54
SRSF1-209ENST00000585096 ZNF727A8MUV8 499 aa11.66□□□□□ -0.54
SRSF1-209ENST00000585096 LINC01551Q86U37 167 aa11.66□□□□□ -0.54
SRSF1-209ENST00000585096 C20orf203Q8NBC4 194 aa11.66□□□□□ -0.54
SRSF1-209ENST00000585096 A0A1B0GVG6 124 aa11.65□□□□□ -0.54
SRSF1-209ENST00000585096 DEFB104AQ8WTQ1 72 aa11.65□□□□□ -0.54
SRSF1-209ENST00000585096 SRP19P09132 144 aaKnown RBP11.64□□□□□ -0.55
SRSF1-209ENST00000585096 KRTAP26-1Q6PEX3 210 aa11.64□□□□□ -0.55
SRSF1-209ENST00000585096 TSKUQ8WUA8 353 aa11.64□□□□□ -0.55
SRSF1-209ENST00000585096 GFRA4Q9GZZ7 299 aa11.64□□□□□ -0.55
SRSF1-209ENST00000585096 IGLV4-60A0A075B6I1 120 aa11.63□□□□□ -0.55
SRSF1-209ENST00000585096 IGLV10-54A0A075B6I4 117 aa11.63□□□□□ -0.55
SRSF1-209ENST00000585096 NCR2O95944 276 aa11.63□□□□□ -0.55
SRSF1-209ENST00000585096 PLA2G1BP04054 148 aaKnown RBP11.63□□□□□ -0.55
SRSF1-209ENST00000585096 DGAT2L7PQ6IED9 249 aa11.63□□□□□ -0.55
SRSF1-209ENST00000585096 SCXQ7RTU7 201 aa11.63□□□□□ -0.55
SRSF1-209ENST00000585096 RPL39LQ96EH5 51 aaKnown RBP11.63□□□□□ -0.55
SRSF1-209ENST00000585096 CHAC1Q9BUX1 264 aa11.63□□□□□ -0.55
SRSF1-209ENST00000585096 OSTCQ9NRP0 149 aa11.63□□□□□ -0.55
SRSF1-209ENST00000585096 A0A1B0GUT8 65 aa11.62□□□□□ -0.55
SRSF1-209ENST00000585096 FAM231BA6NCW3 169 aa11.62□□□□□ -0.55
SRSF1-209ENST00000585096 PRSS1P07477 247 aa11.62□□□□□ -0.55
SRSF1-209ENST00000585096 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
SRSF1-209ENST00000585096 CLRN3Q8NCR9 226 aa11.62□□□□□ -0.55
SRSF1-209ENST00000585096 HIGD1CA8MV81 97 aa11.61□□□□□ -0.55
SRSF1-209ENST00000585096 FAM74A3Q4VXF1 159 aa11.61□□□□□ -0.55
SRSF1-209ENST00000585096 AMMECR1LQ6DCA0 310 aa11.61□□□□□ -0.55
SRSF1-209ENST00000585096 SDHAF1A6NFY7 115 aa11.6□□□□□ -0.55
SRSF1-209ENST00000585096 H7C423 109 aa11.6□□□□□ -0.55
SRSF1-209ENST00000585096 APCSP02743 223 aa11.6□□□□□ -0.55
SRSF1-209ENST00000585096 TMEM241Q24JQ0 296 aa11.6□□□□□ -0.55
SRSF1-209ENST00000585096 SRRM2Q9UQ35 2752 aaKnown RBP11.59□□□□□ -0.55
SRSF1-209ENST00000585096 TRBV6-5A0A0K0K1A5 114 aa11.59□□□□□ -0.55
SRSF1-209ENST00000585096 I3L3M4 83 aa11.59□□□□□ -0.55
SRSF1-209ENST00000585096 PMCHP20382 165 aa11.59□□□□□ -0.55
SRSF1-209ENST00000585096 CIRBP-AS1Q8TBR5 109 aa11.59□□□□□ -0.55
SRSF1-209ENST00000585096 TMEM191AQ9H0A3 160 aa11.59□□□□□ -0.55
SRSF1-209ENST00000585096 C9orf163Q8N9P6 203 aa11.58□□□□□ -0.56
SRSF1-209ENST00000585096 ST20Q9HBF5 79 aa11.58□□□□□ -0.56
SRSF1-209ENST00000585096 VPS13BQ7Z7G8 4022 aa11.57□□□□□ -0.56
SRSF1-209ENST00000585096 RNASEKQ6P5S7 137 aaKnown RBP11.57□□□□□ -0.56
SRSF1-209ENST00000585096 ISOC2Q96AB3 205 aa11.57□□□□□ -0.56
SRSF1-209ENST00000585096 V9GYV3 84 aa11.57□□□□□ -0.56
SRSF1-209ENST00000585096 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.56□□□□□ -0.56
SRSF1-209ENST00000585096 hDV102S1A0JD36 115 aa11.56□□□□□ -0.56
SRSF1-209ENST00000585096 IGKV2-29A2NJV5 120 aaPredicted RBP11.56□□□□□ -0.56
SRSF1-209ENST00000585096 RIGQ13278 110 aa11.56□□□□□ -0.56
SRSF1-209ENST00000585096 PEA15Q15121 130 aa11.56□□□□□ -0.56
SRSF1-209ENST00000585096 MRAP2Q96G30 205 aa11.56□□□□□ -0.56
SRSF1-209ENST00000585096 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
SRSF1-209ENST00000585096 FGF6P10767 208 aa11.55□□□□□ -0.56
SRSF1-209ENST00000585096 RAB4AP20338 218 aa11.55□□□□□ -0.56
SRSF1-209ENST00000585096 RPL23P62829 140 aaKnown RBP11.55□□□□□ -0.56
SRSF1-209ENST00000585096 SMDT1Q9H4I9 107 aa11.55□□□□□ -0.56
SRSF1-209ENST00000585096 AP5S1Q9NUS5 200 aa11.55□□□□□ -0.56
SRSF1-209ENST00000585096 NAT8Q9UHE5 227 aa11.55□□□□□ -0.56
SRSF1-209ENST00000585096 NAT8BQ9UHF3 227 aa11.55□□□□□ -0.56
SRSF1-209ENST00000585096 GAGE12HA6NDE8 117 aa11.54□□□□□ -0.56
SRSF1-209ENST00000585096 ZNF25P17030 456 aaPredicted RBP11.54□□□□□ -0.56
SRSF1-209ENST00000585096 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
SRSF1-209ENST00000585096 ADIRFQ15847 76 aa11.54□□□□□ -0.56
SRSF1-209ENST00000585096 CFAP161Q6P656 301 aa11.54□□□□□ -0.56
SRSF1-209ENST00000585096 NUP35Q8NFH5 326 aa11.54□□□□□ -0.56
SRSF1-209ENST00000585096 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
SRSF1-209ENST00000585096 TMEM101Q96IK0 257 aa11.54□□□□□ -0.56
SRSF1-209ENST00000585096 BTF3L4Q96K17 158 aa11.54□□□□□ -0.56
SRSF1-209ENST00000585096 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.53□□□□□ -0.56
SRSF1-209ENST00000585096 C9JQL5 133 aa11.53□□□□□ -0.56
SRSF1-209ENST00000585096 GAS8-AS1O95177 125 aa11.53□□□□□ -0.56
SRSF1-209ENST00000585096 AMN1Q8IY45 258 aa11.53□□□□□ -0.56
SRSF1-209ENST00000585096 DMBT1Q9UGM3 2413 aaPredicted RBP11.52□□□□□ -0.56
SRSF1-209ENST00000585096 PPP1R17O96001 155 aa11.52□□□□□ -0.57
SRSF1-209ENST00000585096 TMEM242Q9NWH2 141 aa11.52□□□□□ -0.57
SRSF1-209ENST00000585096 TRBV27A0A0K0K1C4 114 aa11.51□□□□□ -0.57
SRSF1-209ENST00000585096 TSHBP01222 138 aa11.51□□□□□ -0.57
SRSF1-209ENST00000585096 ESDP10768 282 aa11.51□□□□□ -0.57
SRSF1-209ENST00000585096 RPS10P46783 165 aaKnown RBP11.51□□□□□ -0.57
SRSF1-209ENST00000585096 POLR2KP53803 58 aaKnown RBP11.51□□□□□ -0.57
SRSF1-209ENST00000585096 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
SRSF1-209ENST00000585096 CHCHD10Q8WYQ3 142 aaPredicted RBP11.51□□□□□ -0.57
SRSF1-209ENST00000585096 MYCBP2O75592 4640 aa11.5□□□□□ -0.57
SRSF1-209ENST00000585096 VCYO14598 125 aa11.5□□□□□ -0.57
SRSF1-209ENST00000585096 SRSF3P84103 164 aaKnown RBP11.5□□□□□ -0.57
SRSF1-209ENST00000585096 OR5A1Q8NGJ0 315 aa11.5□□□□□ -0.57
SRSF1-209ENST00000585096 FLG2Q5D862 2391 aaPredicted RBP11.49□□□□□ -0.57
SRSF1-209ENST00000585096 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
SRSF1-209ENST00000585096 HERC1Q15751 4861 aa11.48□□□□□ -0.57
SRSF1-209ENST00000585096 A0A1B0GW15 77 aa11.48□□□□□ -0.57
SRSF1-209ENST00000585096 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
SRSF1-209ENST00000585096 SMKR1H3BMG3 65 aa11.48□□□□□ -0.57
SRSF1-209ENST00000585096 FCER1GP30273 86 aa11.48□□□□□ -0.57
SRSF1-209ENST00000585096 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.48□□□□□ -0.57
SRSF1-209ENST00000585096 C7orf77A4D0Y5 90 aa11.47□□□□□ -0.57
SRSF1-209ENST00000585096 J3QL48 77 aa11.47□□□□□ -0.57
SRSF1-209ENST00000585096 SLPIP03973 132 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms