RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-228	ENST00000584074	USP17L23	D6RBM5	183 aa		13.99	□□□□□ -0.17
PPP4R1-228	ENST00000584074	SRP19	P09132	144 aa	Known RBP	13.99	□□□□□ -0.17
PPP4R1-228	ENST00000584074	COTL1	Q14019	142 aa		13.99	□□□□□ -0.17
PPP4R1-228	ENST00000584074	C14orf177	Q52M58	125 aa		13.99	□□□□□ -0.17
PPP4R1-228	ENST00000584074	KRTAP26-1	Q6PEX3	210 aa		13.99	□□□□□ -0.17
PPP4R1-228	ENST00000584074	C20orf203	Q8NBC4	194 aa		13.99	□□□□□ -0.17
PPP4R1-228	ENST00000584074	RPL39L	Q96EH5	51 aa	Known RBP	13.99	□□□□□ -0.17
PPP4R1-228	ENST00000584074	IGLV4-60	A0A075B6I1	120 aa		13.98	□□□□□ -0.17
PPP4R1-228	ENST00000584074	ZNF727	A8MUV8	499 aa		13.98	□□□□□ -0.17
PPP4R1-228	ENST00000584074	NDUFS6	O75380	124 aa	Known RBP	13.98	□□□□□ -0.17
PPP4R1-228	ENST00000584074	REG3A	Q06141	175 aa		13.98	□□□□□ -0.17
PPP4R1-228	ENST00000584074	CT83	Q5H943	113 aa		13.98	□□□□□ -0.17
PPP4R1-228	ENST00000584074	IGLV10-54	A0A075B6I4	117 aa		13.97	□□□□□ -0.17
PPP4R1-228	ENST00000584074		A0A1B0GUV1	79 aa		13.97	□□□□□ -0.17
PPP4R1-228	ENST00000584074	AMT	P48728	403 aa		13.97	□□□□□ -0.17
PPP4R1-228	ENST00000584074	GFRA4	Q9GZZ7	299 aa		13.97	□□□□□ -0.17
PPP4R1-228	ENST00000584074	UBE2L6	O14933	153 aa		13.95	□□□□□ -0.18
PPP4R1-228	ENST00000584074	PRSS1	P07477	247 aa		13.95	□□□□□ -0.18
PPP4R1-228	ENST00000584074	HIGD1C	A8MV81	97 aa		13.94	□□□□□ -0.18
PPP4R1-228	ENST00000584074	SCX	Q7RTU7	201 aa		13.94	□□□□□ -0.18
PPP4R1-228	ENST00000584074	TSKU	Q8WUA8	353 aa		13.94	□□□□□ -0.18
PPP4R1-228	ENST00000584074	OSTC	Q9NRP0	149 aa		13.94	□□□□□ -0.18
PPP4R1-228	ENST00000584074	MYCBP2	O75592	4640 aa		13.93	□□□□□ -0.18
PPP4R1-228	ENST00000584074	TEX261	Q6UWH6	196 aa		13.93	□□□□□ -0.18
PPP4R1-228	ENST00000584074	BORCS7	Q96B45	105 aa		13.93	□□□□□ -0.18
PPP4R1-228	ENST00000584074		A0A1B0GUT8	65 aa		13.92	□□□□□ -0.18
PPP4R1-228	ENST00000584074	CHAC1	Q9BUX1	264 aa		13.92	□□□□□ -0.18
PPP4R1-228	ENST00000584074	TRAV8-4	A0A0B4J246	113 aa		13.91	□□□□□ -0.18
PPP4R1-228	ENST00000584074	SDHAF1	A6NFY7	115 aa		13.91	□□□□□ -0.18
PPP4R1-228	ENST00000584074		C9JQL5	133 aa		13.91	□□□□□ -0.18
PPP4R1-228	ENST00000584074	GAS8-AS1	O95177	125 aa		13.91	□□□□□ -0.18
PPP4R1-228	ENST00000584074	LINC00528	Q8N1L1	170 aa		13.91	□□□□□ -0.18
PPP4R1-228	ENST00000584074	FAM231B	A6NCW3	169 aa		13.9	□□□□□ -0.18
PPP4R1-228	ENST00000584074	TMEM241	Q24JQ0	296 aa		13.9	□□□□□ -0.18
PPP4R1-228	ENST00000584074		V9GYV3	84 aa		13.9	□□□□□ -0.18
PPP4R1-228	ENST00000584074	HERC1	Q15751	4861 aa		13.9	□□□□□ -0.19
PPP4R1-228	ENST00000584074	NCR2	O95944	276 aa		13.89	□□□□□ -0.19
PPP4R1-228	ENST00000584074	DGAT2L7P	Q6IED9	249 aa		13.89	□□□□□ -0.19
PPP4R1-228	ENST00000584074	ISOC2	Q96AB3	205 aa		13.89	□□□□□ -0.19
PPP4R1-228	ENST00000584074	TMEM191A	Q9H0A3	160 aa		13.89	□□□□□ -0.19
PPP4R1-228	ENST00000584074	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.88	□□□□□ -0.19
PPP4R1-228	ENST00000584074	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.88	□□□□□ -0.19
PPP4R1-228	ENST00000584074	APCS	P02743	223 aa		13.88	□□□□□ -0.19
PPP4R1-228	ENST00000584074	SRSF3	P84103	164 aa	Known RBP	13.88	□□□□□ -0.19
PPP4R1-228	ENST00000584074	FAM74A3	Q4VXF1	159 aa		13.88	□□□□□ -0.19
PPP4R1-228	ENST00000584074	CIRBP-AS1	Q8TBR5	109 aa		13.88	□□□□□ -0.19
PPP4R1-228	ENST00000584074	TRBV6-5	A0A0K0K1A5	114 aa		13.87	□□□□□ -0.19
PPP4R1-228	ENST00000584074	PMCH	P20382	165 aa		13.87	□□□□□ -0.19
PPP4R1-228	ENST00000584074	RPL23	P62829	140 aa	Known RBP	13.87	□□□□□ -0.19
PPP4R1-228	ENST00000584074	AMMECR1L	Q6DCA0	310 aa		13.87	□□□□□ -0.19
PPP4R1-228	ENST00000584074	NUP35	Q8NFH5	326 aa		13.87	□□□□□ -0.19
PPP4R1-228	ENST00000584074	RNF185	Q96GF1	192 aa		13.87	□□□□□ -0.19
PPP4R1-228	ENST00000584074	IGKV3OR2-268	A0A0C4DH90	116 aa		13.86	□□□□□ -0.19
PPP4R1-228	ENST00000584074		I3L3M4	83 aa		13.86	□□□□□ -0.19
PPP4R1-228	ENST00000584074	PLA2G1B	P04054	148 aa	Known RBP	13.86	□□□□□ -0.19
PPP4R1-228	ENST00000584074	RAB4A	P20338	218 aa		13.86	□□□□□ -0.19
PPP4R1-228	ENST00000584074	ADIRF	Q15847	76 aa		13.86	□□□□□ -0.19
PPP4R1-228	ENST00000584074	AMN1	Q8IY45	258 aa		13.86	□□□□□ -0.19
PPP4R1-228	ENST00000584074	C9orf163	Q8N9P6	203 aa		13.86	□□□□□ -0.19
PPP4R1-228	ENST00000584074	CLRN3	Q8NCR9	226 aa		13.86	□□□□□ -0.19
PPP4R1-228	ENST00000584074	ST20	Q9HBF5	79 aa		13.86	□□□□□ -0.19
PPP4R1-228	ENST00000584074	FGF6	P10767	208 aa		13.85	□□□□□ -0.19
PPP4R1-228	ENST00000584074	RPS10	P46783	165 aa	Known RBP	13.85	□□□□□ -0.19
PPP4R1-228	ENST00000584074	RNASEK	Q6P5S7	137 aa	Known RBP	13.85	□□□□□ -0.19
PPP4R1-228	ENST00000584074	hDV102S1	A0JD36	115 aa		13.84	□□□□□ -0.19
PPP4R1-228	ENST00000584074		H7C423	109 aa		13.84	□□□□□ -0.19
PPP4R1-228	ENST00000584074	RIG	Q13278	110 aa		13.84	□□□□□ -0.19
PPP4R1-228	ENST00000584074	NAT8	Q9UHE5	227 aa		13.84	□□□□□ -0.19
PPP4R1-228	ENST00000584074	GAGE12H	A6NDE8	117 aa		13.83	□□□□□ -0.2
PPP4R1-228	ENST00000584074	TSHB	P01222	138 aa		13.83	□□□□□ -0.2
PPP4R1-228	ENST00000584074	PEA15	Q15121	130 aa		13.83	□□□□□ -0.2
PPP4R1-228	ENST00000584074	MRAP2	Q96G30	205 aa		13.83	□□□□□ -0.2
PPP4R1-228	ENST00000584074	TMEM242	Q9NWH2	141 aa		13.83	□□□□□ -0.2
PPP4R1-228	ENST00000584074	SMKR1	H3BMG3	65 aa		13.82	□□□□□ -0.2
PPP4R1-228	ENST00000584074	NAT8B	Q9UHF3	227 aa		13.82	□□□□□ -0.2
PPP4R1-228	ENST00000584074	FLG2	Q5D862	2391 aa	Predicted RBP	13.82	□□□□□ -0.2
PPP4R1-228	ENST00000584074	ESD	P10768	282 aa		13.81	□□□□□ -0.2
PPP4R1-228	ENST00000584074	POLR2K	P53803	58 aa	Known RBP	13.81	□□□□□ -0.2
PPP4R1-228	ENST00000584074	CNBP	P62633	177 aa	Known RBP	13.81	□□□□□ -0.2
PPP4R1-228	ENST00000584074	SLPI	P03973	132 aa		13.8	□□□□□ -0.2
PPP4R1-228	ENST00000584074	SDIM1	Q6ZPB5	146 aa		13.8	□□□□□ -0.2
PPP4R1-228	ENST00000584074	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.79	□□□□□ -0.2
PPP4R1-228	ENST00000584074	TRBV27	A0A0K0K1C4	114 aa		13.79	□□□□□ -0.2
PPP4R1-228	ENST00000584074	SMIM27	A0A1W2PRY6	76 aa		13.79	□□□□□ -0.2
PPP4R1-228	ENST00000584074	PANO1	I0J062	215 aa		13.79	□□□□□ -0.2
PPP4R1-228	ENST00000584074	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.79	□□□□□ -0.2
PPP4R1-228	ENST00000584074	SMDT1	Q9H4I9	107 aa		13.79	□□□□□ -0.2
PPP4R1-228	ENST00000584074	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.79	□□□□□ -0.2
PPP4R1-228	ENST00000584074	ZNF25	P17030	456 aa	Predicted RBP	13.78	□□□□□ -0.2
PPP4R1-228	ENST00000584074	C15orf56	Q8N910	161 aa		13.78	□□□□□ -0.2
PPP4R1-228	ENST00000584074	AP5S1	Q9NUS5	200 aa		13.78	□□□□□ -0.2
PPP4R1-228	ENST00000584074	KRTAP10-4	P60372	401 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP4R1-228	ENST00000584074	NRAC	Q8N912	160 aa		13.77	□□□□□ -0.21
PPP4R1-228	ENST00000584074	TMEM101	Q96IK0	257 aa		13.77	□□□□□ -0.21
PPP4R1-228	ENST00000584074	BTF3L4	Q96K17	158 aa		13.77	□□□□□ -0.21
PPP4R1-228	ENST00000584074	CAMP	P49913	170 aa		13.76	□□□□□ -0.21
PPP4R1-228	ENST00000584074	OR5A1	Q8NGJ0	315 aa		13.76	□□□□□ -0.21
PPP4R1-228	ENST00000584074	VCY	O14598	125 aa		13.75	□□□□□ -0.21
PPP4R1-228	ENST00000584074	MRPL51	Q4U2R6	128 aa	Known RBP	13.75	□□□□□ -0.21
PPP4R1-228	ENST00000584074	FAM104B	Q5XKR9	115 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms