RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 LRCOL1A6NCL2 159 aa10.46□□□□□ -0.73
SKA2-209ENST00000583976 SMKR1H3BMG3 65 aa10.46□□□□□ -0.73
SKA2-209ENST00000583976 NDUFA5Q16718 116 aa10.46□□□□□ -0.73
SKA2-209ENST00000583976 Q9HAA7 133 aa10.46□□□□□ -0.73
SKA2-209ENST00000583976 A0A087WWC5 75 aa10.45□□□□□ -0.74
SKA2-209ENST00000583976 NCR2O95944 276 aa10.45□□□□□ -0.74
SKA2-209ENST00000583976 S100A8P05109 93 aa10.45□□□□□ -0.74
SKA2-209ENST00000583976 RHEBQ15382 184 aa10.45□□□□□ -0.74
SKA2-209ENST00000583976 MRPL51Q4U2R6 128 aaKnown RBP10.45□□□□□ -0.74
SKA2-209ENST00000583976 FAM104BQ5XKR9 115 aa10.45□□□□□ -0.74
SKA2-209ENST00000583976 KCNIP4Q6PIL6 250 aa10.45□□□□□ -0.74
SKA2-209ENST00000583976 ATP5L2Q7Z4Y8 100 aa10.45□□□□□ -0.74
SKA2-209ENST00000583976 DAZ4Q86SG3 579 aaKnown RBP10.45□□□□□ -0.74
SKA2-209ENST00000583976 BTF3L4Q96K17 158 aa10.45□□□□□ -0.74
SKA2-209ENST00000583976 DAZ3Q9NR90 486 aaKnown RBP10.45□□□□□ -0.74
SKA2-209ENST00000583976 URGCP-MRPS24S4R325 110 aa10.45□□□□□ -0.74
SKA2-209ENST00000583976 IGHV3-30P01768 117 aa10.44□□□□□ -0.74
SKA2-209ENST00000583976 IGHV3-33P01772 117 aa10.44□□□□□ -0.74
SKA2-209ENST00000583976 IGHV3-30-3P0DP02 117 aa10.44□□□□□ -0.74
SKA2-209ENST00000583976 IGHV3-30-5P0DP03 117 aa10.44□□□□□ -0.74
SKA2-209ENST00000583976 Q8N3U1 123 aa10.44□□□□□ -0.74
SKA2-209ENST00000583976 C10orf126Q8N4M7 172 aa10.44□□□□□ -0.74
SKA2-209ENST00000583976 MRAP2Q96G30 205 aa10.44□□□□□ -0.74
SKA2-209ENST00000583976 IMMP2LQ96T52 175 aa10.44□□□□□ -0.74
SKA2-209ENST00000583976 TRBV6-8A0A0A6YYG3 113 aa10.43□□□□□ -0.74
SKA2-209ENST00000583976 PSCAO43653 123 aa10.43□□□□□ -0.74
SKA2-209ENST00000583976 S100PP25815 95 aa10.43□□□□□ -0.74
SKA2-209ENST00000583976 RPS10P46783 165 aaKnown RBP10.43□□□□□ -0.74
SKA2-209ENST00000583976 WFDC2Q14508 124 aa10.43□□□□□ -0.74
SKA2-209ENST00000583976 NTM-AS1Q6ZSK4 140 aa10.43□□□□□ -0.74
SKA2-209ENST00000583976 SVBPQ8N300 66 aa10.43□□□□□ -0.74
SKA2-209ENST00000583976 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
SKA2-209ENST00000583976 K7EP13 123 aa10.42□□□□□ -0.74
SKA2-209ENST00000583976 SNAPINO95295 136 aa10.42□□□□□ -0.74
SKA2-209ENST00000583976 LINC01556Q5JQF7 62 aa10.42□□□□□ -0.74
SKA2-209ENST00000583976 Q8N814 137 aa10.42□□□□□ -0.74
SKA2-209ENST00000583976 TMEM242Q9NWH2 141 aa10.42□□□□□ -0.74
SKA2-209ENST00000583976 SDHAF1A6NFY7 115 aa10.41□□□□□ -0.74
SKA2-209ENST00000583976 TMEM262E9PQX1 116 aa10.41□□□□□ -0.74
SKA2-209ENST00000583976 CKS2P33552 79 aa10.41□□□□□ -0.74
SKA2-209ENST00000583976 TMEM70Q9BUB7 260 aa10.41□□□□□ -0.74
SKA2-209ENST00000583976 ST20Q9HBF5 79 aa10.41□□□□□ -0.74
SKA2-209ENST00000583976 IBA57-AS1B1ANH7 110 aa10.4□□□□□ -0.74
SKA2-209ENST00000583976 TMEM97Q5BJF2 176 aa10.4□□□□□ -0.74
SKA2-209ENST00000583976 CHCHD5Q9BSY4 110 aa10.4□□□□□ -0.74
SKA2-209ENST00000583976 LRP1Q07954 4544 aaKnown RBP10.39□□□□□ -0.75
SKA2-209ENST00000583976 HMCN2Q8NDA2 5059 aa10.39□□□□□ -0.75
SKA2-209ENST00000583976 TRBV25-1A0A075B6N4 114 aa10.39□□□□□ -0.75
SKA2-209ENST00000583976 IGHV1-24A0A0C4DH33 117 aa10.39□□□□□ -0.75
SKA2-209ENST00000583976 TRBV6-5A0A0K0K1A5 114 aa10.39□□□□□ -0.75
SKA2-209ENST00000583976 D6R8Y8 96 aa10.39□□□□□ -0.75
SKA2-209ENST00000583976 PMCHP20382 165 aa10.39□□□□□ -0.75
SKA2-209ENST00000583976 COTL1Q14019 142 aa10.39□□□□□ -0.75
SKA2-209ENST00000583976 NIT1Q86X76 327 aa10.39□□□□□ -0.75
SKA2-209ENST00000583976 NRACQ8N912 160 aa10.39□□□□□ -0.75
SKA2-209ENST00000583976 NTN5Q8WTR8 489 aaPredicted RBP10.39□□□□□ -0.75
SKA2-209ENST00000583976 TRAV9-1A0A075B6T8 112 aa10.38□□□□□ -0.75
SKA2-209ENST00000583976 FAM229AH3BQW9 127 aa10.38□□□□□ -0.75
SKA2-209ENST00000583976 GAGE6Q13070 117 aa10.38□□□□□ -0.75
SKA2-209ENST00000583976 ATRAIDQ6UW56 229 aa10.38□□□□□ -0.75
SKA2-209ENST00000583976 A0A087WX48 190 aa10.37□□□□□ -0.75
SKA2-209ENST00000583976 I3L3M4 83 aa10.37□□□□□ -0.75
SKA2-209ENST00000583976 LECT2O14960 151 aa10.37□□□□□ -0.75
SKA2-209ENST00000583976 PPP1R17O96001 155 aa10.37□□□□□ -0.75
SKA2-209ENST00000583976 AMTP48728 403 aa10.37□□□□□ -0.75
SKA2-209ENST00000583976 IQCJQ1A5X6 159 aa10.37□□□□□ -0.75
SKA2-209ENST00000583976 TMEM136Q6ZRR5 245 aa10.37□□□□□ -0.75
SKA2-209ENST00000583976 FAT3Q8TDW7 4589 aa10.37□□□□□ -0.75
SKA2-209ENST00000583976 TNFRSF6BO95407 300 aa10.36□□□□□ -0.75
SKA2-209ENST00000583976 NPYP01303 97 aa10.36□□□□□ -0.75
SKA2-209ENST00000583976 POLR2KP53803 58 aaKnown RBP10.36□□□□□ -0.75
SKA2-209ENST00000583976 SUMO2P61956 95 aaKnown RBP10.36□□□□□ -0.75
SKA2-209ENST00000583976 ORMDL3Q8N138 153 aa10.36□□□□□ -0.75
SKA2-209ENST00000583976 TMEM243Q9BU79 118 aa10.36□□□□□ -0.75
SKA2-209ENST00000583976 TGIF2-C20orf24A0A0A6YYL0 155 aa10.35□□□□□ -0.75
SKA2-209ENST00000583976 PPBPP02775 128 aa10.35□□□□□ -0.75
SKA2-209ENST00000583976 MPV17L2Q567V2 206 aa10.35□□□□□ -0.75
SKA2-209ENST00000583976 PRELID3AQ96N28 172 aa10.35□□□□□ -0.75
SKA2-209ENST00000583976 VCYO14598 125 aa10.34□□□□□ -0.75
SKA2-209ENST00000583976 TSHBP01222 138 aa10.34□□□□□ -0.75
SKA2-209ENST00000583976 APCSP02743 223 aa10.34□□□□□ -0.75
SKA2-209ENST00000583976 Q8N976 141 aa10.34□□□□□ -0.75
SKA2-209ENST00000583976 KLK12Q9UKR0 248 aa10.34□□□□□ -0.75
SKA2-209ENST00000583976 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.33□□□□□ -0.76
SKA2-209ENST00000583976 TRBV24-1A0A075B6N3 115 aa10.33□□□□□ -0.76
SKA2-209ENST00000583976 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.33□□□□□ -0.76
SKA2-209ENST00000583976 TRBV27A0A0K0K1C4 114 aa10.33□□□□□ -0.76
SKA2-209ENST00000583976 IGKV2-29A2NJV5 120 aaPredicted RBP10.33□□□□□ -0.76
SKA2-209ENST00000583976 UBE2L6O14933 153 aa10.33□□□□□ -0.76
SKA2-209ENST00000583976 ELOBQ15370 118 aa10.33□□□□□ -0.76
SKA2-209ENST00000583976 KIAA1644Q3SXP7 199 aa10.33□□□□□ -0.76
SKA2-209ENST00000583976 LINC01620Q4KN68 170 aa10.33□□□□□ -0.76
SKA2-209ENST00000583976 Q6ZSA8 131 aa10.33□□□□□ -0.76
SKA2-209ENST00000583976 LINC00528Q8N1L1 170 aa10.33□□□□□ -0.76
SKA2-209ENST00000583976 C20orf78Q9BR46 151 aa10.33□□□□□ -0.76
SKA2-209ENST00000583976 J3QL48 77 aa10.32□□□□□ -0.76
SKA2-209ENST00000583976 ANGP03950 147 aaKnown RBP10.32□□□□□ -0.76
SKA2-209ENST00000583976 FCER1GP30273 86 aa10.32□□□□□ -0.76
SKA2-209ENST00000583976 LAGE3Q14657 143 aa10.32□□□□□ -0.76
SKA2-209ENST00000583976 KIR2DL4Q99706 377 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms