RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 LYPD6BQ8NI32 183 aa9.23□□□□□ -0.93
CDK5RAP3-226ENST00000583182 IGLC6P0CF74 106 aa9.22□□□□□ -0.93
CDK5RAP3-226ENST00000583182 SULT1A2P50226 295 aa9.22□□□□□ -0.93
CDK5RAP3-226ENST00000583182 PGLYRP4Q96LB8 373 aa9.22□□□□□ -0.93
CDK5RAP3-226ENST00000583182 A0A1B0GV50 99 aa9.21□□□□□ -0.94
CDK5RAP3-226ENST00000583182 CFAP161Q6P656 301 aa9.21□□□□□ -0.94
CDK5RAP3-226ENST00000583182 RASL11AQ6T310 242 aa9.21□□□□□ -0.94
CDK5RAP3-226ENST00000583182 SFT2D1Q8WV19 159 aa9.21□□□□□ -0.94
CDK5RAP3-226ENST00000583182 TPPP3Q9BW30 176 aa9.21□□□□□ -0.94
CDK5RAP3-226ENST00000583182 LPAP08519 4548 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 A0A096LNI7 61 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 IGKV3OR2-268A0A0C4DH90 116 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 UBE2L6O14933 153 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 ARPC5O15511 151 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 ZNF345Q14585 488 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 SPINK6Q6UWN8 80 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 TMUB2Q71RG4 321 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 FER1L6-AS1Q8NA97 138 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 MBD3L1Q8WWY6 194 aa9.2□□□□□ -0.94
CDK5RAP3-226ENST00000583182 GAS8-AS1O95177 125 aa9.19□□□□□ -0.94
CDK5RAP3-226ENST00000583182 RPL35P42766 123 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-226ENST00000583182 AMTP48728 403 aa9.19□□□□□ -0.94
CDK5RAP3-226ENST00000583182 NDUFA5Q16718 116 aa9.19□□□□□ -0.94
CDK5RAP3-226ENST00000583182 KCNRGQ8N5I3 272 aa9.19□□□□□ -0.94
CDK5RAP3-226ENST00000583182 NIT2Q9NQR4 276 aa9.19□□□□□ -0.94
CDK5RAP3-226ENST00000583182 GVQW2A0A096LPI5 108 aaPredicted RBP9.18□□□□□ -0.94
CDK5RAP3-226ENST00000583182 CACNG7P62955 275 aa9.18□□□□□ -0.94
CDK5RAP3-226ENST00000583182 SRSF9Q13242 221 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDK5RAP3-226ENST00000583182 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
CDK5RAP3-226ENST00000583182 TEX261Q6UWH6 196 aa9.18□□□□□ -0.94
CDK5RAP3-226ENST00000583182 FAM213BQ8TBF2 198 aa9.18□□□□□ -0.94
CDK5RAP3-226ENST00000583182 CHCHD10Q8WYQ3 142 aaPredicted RBP9.18□□□□□ -0.94
CDK5RAP3-226ENST00000583182 COTL1Q14019 142 aa9.17□□□□□ -0.94
CDK5RAP3-226ENST00000583182 OR2D3Q8NGH3 330 aa9.17□□□□□ -0.94
CDK5RAP3-226ENST00000583182 C19orf71A6NCJ1 209 aa9.15□□□□□ -0.94
CDK5RAP3-226ENST00000583182 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-226ENST00000583182 CENPWQ5EE01 88 aa9.15□□□□□ -0.94
CDK5RAP3-226ENST00000583182 SLC51BQ86UW2 128 aa9.15□□□□□ -0.94
CDK5RAP3-226ENST00000583182 BCL2L11O43521 198 aa9.14□□□□□ -0.95
CDK5RAP3-226ENST00000583182 TRGC1P0CF51 173 aa9.14□□□□□ -0.95
CDK5RAP3-226ENST00000583182 NTF3P20783 257 aa9.14□□□□□ -0.95
CDK5RAP3-226ENST00000583182 FOXI1Q12951 378 aa9.14□□□□□ -0.95
CDK5RAP3-226ENST00000583182 LYZL1Q6UWQ5 148 aa9.14□□□□□ -0.95
CDK5RAP3-226ENST00000583182 C11orf52Q96A22 123 aa9.14□□□□□ -0.95
CDK5RAP3-226ENST00000583182 KANTRA0A1W2PQU2 76 aa9.13□□□□□ -0.95
CDK5RAP3-226ENST00000583182 UMAD1C9J7I0 102 aa9.13□□□□□ -0.95
CDK5RAP3-226ENST00000583182 F2Z2F3 143 aa9.13□□□□□ -0.95
CDK5RAP3-226ENST00000583182 ATP6V1G1O75348 118 aa9.13□□□□□ -0.95
CDK5RAP3-226ENST00000583182 Q6ZRP5 223 aa9.13□□□□□ -0.95
CDK5RAP3-226ENST00000583182 LINC00526Q96FQ7 95 aa9.13□□□□□ -0.95
CDK5RAP3-226ENST00000583182 LINC00474Q9P2X8 69 aa9.13□□□□□ -0.95
CDK5RAP3-226ENST00000583182 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-226ENST00000583182 TRAV26-2A0A0B4J265 109 aa9.12□□□□□ -0.95
CDK5RAP3-226ENST00000583182 IGKV2-29A2NJV5 120 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-226ENST00000583182 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
CDK5RAP3-226ENST00000583182 AMMECR1LQ6DCA0 310 aa9.12□□□□□ -0.95
CDK5RAP3-226ENST00000583182 RNASEKQ6P5S7 137 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-226ENST00000583182 GATD1Q8NB37 220 aa9.12□□□□□ -0.95
CDK5RAP3-226ENST00000583182 RAB19A4D1S5 217 aa9.11□□□□□ -0.95
CDK5RAP3-226ENST00000583182 CCL20P78556 96 aa9.11□□□□□ -0.95
CDK5RAP3-226ENST00000583182 CLLU1Q5K131 121 aa9.11□□□□□ -0.95
CDK5RAP3-226ENST00000583182 XKRY2A2RUG3 117 aa9.1□□□□□ -0.95
CDK5RAP3-226ENST00000583182 IFNA1P01562 189 aa9.1□□□□□ -0.95
CDK5RAP3-226ENST00000583182 FGF6P10767 208 aa9.1□□□□□ -0.95
CDK5RAP3-226ENST00000583182 XCL1P47992 114 aa9.1□□□□□ -0.95
CDK5RAP3-226ENST00000583182 RPL39LQ96EH5 51 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-226ENST00000583182 CARD19Q96LW7 228 aa9.1□□□□□ -0.95
CDK5RAP3-226ENST00000583182 GNG13Q9P2W3 67 aa9.1□□□□□ -0.95
CDK5RAP3-226ENST00000583182 LINC00862A6NCI5 91 aa9.09□□□□□ -0.95
CDK5RAP3-226ENST00000583182 NCR2O95944 276 aa9.09□□□□□ -0.95
CDK5RAP3-226ENST00000583182 CTRLP40313 264 aa9.09□□□□□ -0.95
CDK5RAP3-226ENST00000583182 SLC7A5P1Q8MH63 180 aa9.09□□□□□ -0.95
CDK5RAP3-226ENST00000583182 OR5A1Q8NGJ0 315 aa9.09□□□□□ -0.95
CDK5RAP3-226ENST00000583182 MANBALQ9NQG1 85 aa9.09□□□□□ -0.95
CDK5RAP3-226ENST00000583182 TRBV20OR9-2A0A075B6H5 130 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 IGHV1-58A0A0C4DH39 117 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 H7C423 109 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 CCL25O15444 150 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 APCSP02743 223 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 GNG4P50150 75 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 RAB14P61106 215 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 EIF5AP63241 154 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 TWIST1Q15672 202 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 SMIM12Q96EX1 92 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 CNFNQ9BYD5 112 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 PKIGQ9Y2B9 76 aa9.08□□□□□ -0.96
CDK5RAP3-226ENST00000583182 LINC00959A0A1B0GUT2 108 aa9.07□□□□□ -0.96
CDK5RAP3-226ENST00000583182 PTTG1IPP53801 180 aa9.07□□□□□ -0.96
CDK5RAP3-226ENST00000583182 FAM231BA6NCW3 169 aa9.06□□□□□ -0.96
CDK5RAP3-226ENST00000583182 ZNF25P17030 456 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-226ENST00000583182 S100A1P23297 94 aa9.06□□□□□ -0.96
CDK5RAP3-226ENST00000583182 FOXA3P55318 350 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-226ENST00000583182 SYCNQ0VAF6 134 aa9.06□□□□□ -0.96
CDK5RAP3-226ENST00000583182 ALKAL2Q6UX46 152 aa9.06□□□□□ -0.96
CDK5RAP3-226ENST00000583182 NUDT10Q8NFP7 164 aa9.06□□□□□ -0.96
CDK5RAP3-226ENST00000583182 NUDT11Q96G61 164 aa9.06□□□□□ -0.96
CDK5RAP3-226ENST00000583182 MED9Q9NWA0 146 aa9.06□□□□□ -0.96
CDK5RAP3-226ENST00000583182 A0A1W2PNN7 141 aa9.05□□□□□ -0.96
CDK5RAP3-226ENST00000583182 SDHAF1A6NFY7 115 aa9.05□□□□□ -0.96
CDK5RAP3-226ENST00000583182 TRAV1-1A0A0B4J248 108 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms