RNA–Protein interactions for RNA: ENST00000581460.1

RAB11FIP4-207, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-207ENST00000581460 CLRN3Q8NCR9 226 aa12.57□□□□□ -0.4
RAB11FIP4-207ENST00000581460 OCC1Q8TAD7 63 aa12.57□□□□□ -0.4
RAB11FIP4-207ENST00000581460 IGLV4-60A0A075B6I1 120 aa12.56□□□□□ -0.4
RAB11FIP4-207ENST00000581460 K7EN84 100 aa12.56□□□□□ -0.4
RAB11FIP4-207ENST00000581460 C9orf163Q8N9P6 203 aa12.56□□□□□ -0.4
RAB11FIP4-207ENST00000581460 hDV102S1A0JD36 115 aa12.55□□□□□ -0.4
RAB11FIP4-207ENST00000581460 KRTAP29-1A8MX34 341 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP4-207ENST00000581460 AKAP14Q86UN6 197 aa12.55□□□□□ -0.4
RAB11FIP4-207ENST00000581460 CNFNQ9BYD5 112 aa12.55□□□□□ -0.4
RAB11FIP4-207ENST00000581460 TRAV26-2A0A0B4J265 109 aa12.54□□□□□ -0.4
RAB11FIP4-207ENST00000581460 BLOC1S1P78537 153 aa12.54□□□□□ -0.4
RAB11FIP4-207ENST00000581460 GATD1Q8NB37 220 aa12.54□□□□□ -0.4
RAB11FIP4-207ENST00000581460 GFRA4Q9GZZ7 299 aa12.54□□□□□ -0.4
RAB11FIP4-207ENST00000581460 AP5S1Q9NUS5 200 aa12.54□□□□□ -0.4
RAB11FIP4-207ENST00000581460 GATCO43716 136 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP4-207ENST00000581460 CEBPGP53567 150 aa12.53□□□□□ -0.4
RAB11FIP4-207ENST00000581460 RPL37AP61513 92 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP4-207ENST00000581460 ALKAL2Q6UX46 152 aa12.53□□□□□ -0.4
RAB11FIP4-207ENST00000581460 TMEM250H0YL14 139 aa12.52□□□□□ -0.41
RAB11FIP4-207ENST00000581460 AMMECR1LQ6DCA0 310 aa12.52□□□□□ -0.41
RAB11FIP4-207ENST00000581460 IGKV3OR2-268A0A0C4DH90 116 aa12.51□□□□□ -0.41
RAB11FIP4-207ENST00000581460 Q6ZNX1 250 aa12.51□□□□□ -0.41
RAB11FIP4-207ENST00000581460 GTSF1Q8WW33 167 aa12.51□□□□□ -0.41
RAB11FIP4-207ENST00000581460 hCG_2014768A0A024R1R8 64 aa12.5□□□□□ -0.41
RAB11FIP4-207ENST00000581460 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP4-207ENST00000581460 A8MWL6 223 aa12.5□□□□□ -0.41
RAB11FIP4-207ENST00000581460 KRTAP10-4P60372 401 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP4-207ENST00000581460 CNBPP62633 177 aaKnown RBP12.5□□□□□ -0.41
RAB11FIP4-207ENST00000581460 TEX261Q6UWH6 196 aa12.5□□□□□ -0.41
RAB11FIP4-207ENST00000581460 RPL39LQ96EH5 51 aaKnown RBP12.5□□□□□ -0.41
RAB11FIP4-207ENST00000581460 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP4-207ENST00000581460 APCSP02743 223 aa12.49□□□□□ -0.41
RAB11FIP4-207ENST00000581460 RNASEKQ6P5S7 137 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP4-207ENST00000581460 SDIM1Q6ZPB5 146 aa12.49□□□□□ -0.41
RAB11FIP4-207ENST00000581460 BORCS7Q96B45 105 aa12.49□□□□□ -0.41
RAB11FIP4-207ENST00000581460 IGHV3-64A0A075B6Q5 118 aa12.48□□□□□ -0.41
RAB11FIP4-207ENST00000581460 NCR2O95944 276 aa12.48□□□□□ -0.41
RAB11FIP4-207ENST00000581460 FOXA3P55318 350 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP4-207ENST00000581460 CFAP161Q6P656 301 aa12.48□□□□□ -0.41
RAB11FIP4-207ENST00000581460 FAM231DQ6ZW35 169 aa12.48□□□□□ -0.41
RAB11FIP4-207ENST00000581460 DPH3Q96FX2 82 aa12.48□□□□□ -0.41
RAB11FIP4-207ENST00000581460 GAGE12HA6NDE8 117 aa12.47□□□□□ -0.41
RAB11FIP4-207ENST00000581460 SDHAF1A6NFY7 115 aa12.47□□□□□ -0.41
RAB11FIP4-207ENST00000581460 EIF5A2Q9GZV4 153 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-207ENST00000581460 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP4-207ENST00000581460 IGKV2-29A2NJV5 120 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP4-207ENST00000581460 PMCHP20382 165 aa12.46□□□□□ -0.41
RAB11FIP4-207ENST00000581460 H7C423 109 aa12.45□□□□□ -0.42
RAB11FIP4-207ENST00000581460 PANO1I0J062 215 aa12.45□□□□□ -0.42
RAB11FIP4-207ENST00000581460 OXTP01178 125 aa12.45□□□□□ -0.42
RAB11FIP4-207ENST00000581460 CT83Q5H943 113 aa12.45□□□□□ -0.42
RAB11FIP4-207ENST00000581460 SMIM7Q9BQ49 75 aa12.45□□□□□ -0.42
RAB11FIP4-207ENST00000581460 FGF6P10767 208 aa12.44□□□□□ -0.42
RAB11FIP4-207ENST00000581460 LYPD6BQ8NI32 183 aa12.44□□□□□ -0.42
RAB11FIP4-207ENST00000581460 I3L3M4 83 aa12.43□□□□□ -0.42
RAB11FIP4-207ENST00000581460 CHCHD10Q8WYQ3 142 aaPredicted RBP12.43□□□□□ -0.42
RAB11FIP4-207ENST00000581460 BTF3L4Q96K17 158 aa12.43□□□□□ -0.42
RAB11FIP4-207ENST00000581460 TMEM101Q96IK0 257 aa12.42□□□□□ -0.42
RAB11FIP4-207ENST00000581460 A0A1B0GUT8 65 aa12.41□□□□□ -0.42
RAB11FIP4-207ENST00000581460 HIGD1CA8MV81 97 aa12.41□□□□□ -0.42
RAB11FIP4-207ENST00000581460 SLPIP03973 132 aa12.41□□□□□ -0.42
RAB11FIP4-207ENST00000581460 ZNF25P17030 456 aaPredicted RBP12.41□□□□□ -0.42
RAB11FIP4-207ENST00000581460 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
RAB11FIP4-207ENST00000581460 HIGD2BQ4VC39 106 aa12.41□□□□□ -0.42
RAB11FIP4-207ENST00000581460 C15orf56Q8N910 161 aa12.41□□□□□ -0.42
RAB11FIP4-207ENST00000581460 TSKUQ8WUA8 353 aa12.41□□□□□ -0.42
RAB11FIP4-207ENST00000581460 ST20Q9HBF5 79 aa12.41□□□□□ -0.42
RAB11FIP4-207ENST00000581460 TRBV6-5A0A0K0K1A5 114 aa12.4□□□□□ -0.42
RAB11FIP4-207ENST00000581460 ZNF727A8MUV8 499 aa12.4□□□□□ -0.42
RAB11FIP4-207ENST00000581460 CHTF8P0CG12 524 aa12.4□□□□□ -0.42
RAB11FIP4-207ENST00000581460 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
RAB11FIP4-207ENST00000581460 RNF185Q96GF1 192 aa12.4□□□□□ -0.42
RAB11FIP4-207ENST00000581460 LRP1Q07954 4544 aaKnown RBP12.39□□□□□ -0.43
RAB11FIP4-207ENST00000581460 RPS10P46783 165 aaKnown RBP12.39□□□□□ -0.43
RAB11FIP4-207ENST00000581460 MRAP2Q96G30 205 aa12.39□□□□□ -0.43
RAB11FIP4-207ENST00000581460 FAM210AQ96ND0 272 aa12.39□□□□□ -0.43
RAB11FIP4-207ENST00000581460 TMEM242Q9NWH2 141 aa12.39□□□□□ -0.43
RAB11FIP4-207ENST00000581460 A0A087WYN8 130 aa12.38□□□□□ -0.43
RAB11FIP4-207ENST00000581460 NDUFS6O75380 124 aaKnown RBP12.38□□□□□ -0.43
RAB11FIP4-207ENST00000581460 HNRNPA3P51991 378 aaKnown RBP12.38□□□□□ -0.43
RAB11FIP4-207ENST00000581460 SERTAD4-AS1Q5TG53 156 aa12.38□□□□□ -0.43
RAB11FIP4-207ENST00000581460 OR5A1Q8NGJ0 315 aa12.38□□□□□ -0.43
RAB11FIP4-207ENST00000581460 SPACA4Q8TDM5 124 aa12.38□□□□□ -0.43
RAB11FIP4-207ENST00000581460 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
RAB11FIP4-207ENST00000581460 OSTCQ9NRP0 149 aa12.38□□□□□ -0.43
RAB11FIP4-207ENST00000581460 FAM231BA6NCW3 169 aa12.37□□□□□ -0.43
RAB11FIP4-207ENST00000581460 XCL1P47992 114 aa12.37□□□□□ -0.43
RAB11FIP4-207ENST00000581460 PKHD1L1Q86WI1 4243 aa12.37□□□□□ -0.43
RAB11FIP4-207ENST00000581460 GAS8-AS1O95177 125 aa12.36□□□□□ -0.43
RAB11FIP4-207ENST00000581460 TSHBP01222 138 aa12.36□□□□□ -0.43
RAB11FIP4-207ENST00000581460 COX6A2Q02221 97 aa12.36□□□□□ -0.43
RAB11FIP4-207ENST00000581460 FAT3Q8TDW7 4589 aa12.35□□□□□ -0.43
RAB11FIP4-207ENST00000581460 GVQW2A0A096LPI5 108 aaPredicted RBP12.35□□□□□ -0.43
RAB11FIP4-207ENST00000581460 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP4-207ENST00000581460 FOXI1Q12951 378 aa12.35□□□□□ -0.43
RAB11FIP4-207ENST00000581460 RIGQ13278 110 aa12.35□□□□□ -0.43
RAB11FIP4-207ENST00000581460 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
RAB11FIP4-207ENST00000581460 CCL25O15444 150 aa12.34□□□□□ -0.43
RAB11FIP4-207ENST00000581460 ESDP10768 282 aa12.34□□□□□ -0.43
RAB11FIP4-207ENST00000581460 RAB4AP20338 218 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms