RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, human

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-208	ENST00000580584	IGLV4-60	A0A075B6I1	120 aa		10.14	□□□□□ -0.79
PMP22-208	ENST00000580584	AMT	P48728	403 aa		10.14	□□□□□ -0.79
PMP22-208	ENST00000580584	COTL1	Q14019	142 aa		10.14	□□□□□ -0.79
PMP22-208	ENST00000580584	C20orf203	Q8NBC4	194 aa		10.14	□□□□□ -0.79
PMP22-208	ENST00000580584	VPS13B	Q7Z7G8	4022 aa		10.13	□□□□□ -0.79
PMP22-208	ENST00000580584	IGLV10-54	A0A075B6I4	117 aa		10.13	□□□□□ -0.79
PMP22-208	ENST00000580584	USP17L23	D6RBM5	183 aa		10.13	□□□□□ -0.79
PMP22-208	ENST00000580584	NDUFS6	O75380	124 aa	Known RBP	10.13	□□□□□ -0.79
PMP22-208	ENST00000580584	REG3A	Q06141	175 aa		10.13	□□□□□ -0.79
PMP22-208	ENST00000580584	KRTAP26-1	Q6PEX3	210 aa		10.13	□□□□□ -0.79
PMP22-208	ENST00000580584	GFRA4	Q9GZZ7	299 aa		10.13	□□□□□ -0.79
PMP22-208	ENST00000580584	SRRM2	Q9UQ35	2752 aa	Known RBP	10.13	□□□□□ -0.79
PMP22-208	ENST00000580584	HIGD1C	A8MV81	97 aa		10.12	□□□□□ -0.79
PMP22-208	ENST00000580584		C9JQL5	133 aa		10.12	□□□□□ -0.79
PMP22-208	ENST00000580584	UBE2L6	O14933	153 aa		10.12	□□□□□ -0.79
PMP22-208	ENST00000580584	TSKU	Q8WUA8	353 aa		10.12	□□□□□ -0.79
PMP22-208	ENST00000580584	BORCS7	Q96B45	105 aa		10.12	□□□□□ -0.79
PMP22-208	ENST00000580584	INAFM2	P0DMQ5	153 aa		10.11	□□□□□ -0.79
PMP22-208	ENST00000580584	C14orf177	Q52M58	125 aa		10.11	□□□□□ -0.79
PMP22-208	ENST00000580584	OSTC	Q9NRP0	149 aa		10.11	□□□□□ -0.79
PMP22-208	ENST00000580584		A0A1B0GUV1	79 aa		10.1	□□□□□ -0.79
PMP22-208	ENST00000580584	FAM229A	H3BQW9	127 aa		10.1	□□□□□ -0.79
PMP22-208	ENST00000580584	GAS8-AS1	O95177	125 aa		10.1	□□□□□ -0.79
PMP22-208	ENST00000580584	SRSF3	P84103	164 aa	Known RBP	10.1	□□□□□ -0.79
PMP22-208	ENST00000580584	TEX261	Q6UWH6	196 aa		10.1	□□□□□ -0.79
PMP22-208	ENST00000580584		V9GYV3	84 aa		10.1	□□□□□ -0.79
PMP22-208	ENST00000580584		A0A1B0GUT8	65 aa		10.09	□□□□□ -0.79
PMP22-208	ENST00000580584	PRSS1	P07477	247 aa		10.09	□□□□□ -0.79
PMP22-208	ENST00000580584	SCX	Q7RTU7	201 aa		10.09	□□□□□ -0.79
PMP22-208	ENST00000580584	ISOC2	Q96AB3	205 aa		10.09	□□□□□ -0.79
PMP22-208	ENST00000580584	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.08	□□□□□ -0.8
PMP22-208	ENST00000580584	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.08	□□□□□ -0.8
PMP22-208	ENST00000580584	SDHAF1	A6NFY7	115 aa		10.08	□□□□□ -0.8
PMP22-208	ENST00000580584	RPL23	P62829	140 aa	Known RBP	10.08	□□□□□ -0.8
PMP22-208	ENST00000580584	ADIRF	Q15847	76 aa		10.08	□□□□□ -0.8
PMP22-208	ENST00000580584	TMEM241	Q24JQ0	296 aa		10.08	□□□□□ -0.8
PMP22-208	ENST00000580584	FAM231B	A6NCW3	169 aa		10.07	□□□□□ -0.8
PMP22-208	ENST00000580584	APCS	P02743	223 aa		10.07	□□□□□ -0.8
PMP22-208	ENST00000580584	FAM74A3	Q4VXF1	159 aa		10.07	□□□□□ -0.8
PMP22-208	ENST00000580584	AMN1	Q8IY45	258 aa		10.07	□□□□□ -0.8
PMP22-208	ENST00000580584	RNF185	Q96GF1	192 aa		10.07	□□□□□ -0.8
PMP22-208	ENST00000580584	TMEM191A	Q9H0A3	160 aa		10.07	□□□□□ -0.8
PMP22-208	ENST00000580584	TRAV8-4	A0A0B4J246	113 aa		10.06	□□□□□ -0.8
PMP22-208	ENST00000580584	IGKV3OR2-268	A0A0C4DH90	116 aa		10.06	□□□□□ -0.8
PMP22-208	ENST00000580584	NCR2	O95944	276 aa		10.06	□□□□□ -0.8
PMP22-208	ENST00000580584	RPS10	P46783	165 aa	Known RBP	10.06	□□□□□ -0.8
PMP22-208	ENST00000580584	PEA15	Q15121	130 aa		10.06	□□□□□ -0.8
PMP22-208	ENST00000580584	LINC00528	Q8N1L1	170 aa		10.06	□□□□□ -0.8
PMP22-208	ENST00000580584	NUP35	Q8NFH5	326 aa		10.06	□□□□□ -0.8
PMP22-208	ENST00000580584	NAT8	Q9UHE5	227 aa		10.06	□□□□□ -0.8
PMP22-208	ENST00000580584	MYCBP2	O75592	4640 aa		10.06	□□□□□ -0.8
PMP22-208	ENST00000580584	TRBV6-5	A0A0K0K1A5	114 aa		10.05	□□□□□ -0.8
PMP22-208	ENST00000580584		I3L3M4	83 aa		10.05	□□□□□ -0.8
PMP22-208	ENST00000580584	PMCH	P20382	165 aa		10.05	□□□□□ -0.8
PMP22-208	ENST00000580584	AMMECR1L	Q6DCA0	310 aa		10.05	□□□□□ -0.8
PMP22-208	ENST00000580584	RNASEK	Q6P5S7	137 aa	Known RBP	10.05	□□□□□ -0.8
PMP22-208	ENST00000580584	CHAC1	Q9BUX1	264 aa		10.05	□□□□□ -0.8
PMP22-208	ENST00000580584	SMKR1	H3BMG3	65 aa		10.04	□□□□□ -0.8
PMP22-208	ENST00000580584	TSHB	P01222	138 aa		10.04	□□□□□ -0.8
PMP22-208	ENST00000580584	RAB4A	P20338	218 aa		10.04	□□□□□ -0.8
PMP22-208	ENST00000580584	RIG	Q13278	110 aa		10.04	□□□□□ -0.8
PMP22-208	ENST00000580584	CIRBP-AS1	Q8TBR5	109 aa		10.04	□□□□□ -0.8
PMP22-208	ENST00000580584	ST20	Q9HBF5	79 aa		10.04	□□□□□ -0.8
PMP22-208	ENST00000580584	TMEM242	Q9NWH2	141 aa		10.04	□□□□□ -0.8
PMP22-208	ENST00000580584	hDV102S1	A0JD36	115 aa		10.03	□□□□□ -0.8
PMP22-208	ENST00000580584	FGF6	P10767	208 aa		10.03	□□□□□ -0.8
PMP22-208	ENST00000580584	MRAP2	Q96G30	205 aa		10.03	□□□□□ -0.8
PMP22-208	ENST00000580584	NAT8B	Q9UHF3	227 aa		10.03	□□□□□ -0.8
PMP22-208	ENST00000580584	GAGE12H	A6NDE8	117 aa		10.02	□□□□□ -0.81
PMP22-208	ENST00000580584	DGAT2L7P	Q6IED9	249 aa		10.02	□□□□□ -0.81
PMP22-208	ENST00000580584	HERC1	Q15751	4861 aa		10.01	□□□□□ -0.81
PMP22-208	ENST00000580584	SMIM27	A0A1W2PRY6	76 aa		10.01	□□□□□ -0.81
PMP22-208	ENST00000580584		H7C423	109 aa		10.01	□□□□□ -0.81
PMP22-208	ENST00000580584	C9orf163	Q8N9P6	203 aa		10.01	□□□□□ -0.81
PMP22-208	ENST00000580584	CLRN3	Q8NCR9	226 aa		10.01	□□□□□ -0.81
PMP22-208	ENST00000580584	PLA2G1B	P04054	148 aa	Known RBP	10	□□□□□ -0.81
PMP22-208	ENST00000580584	ESD	P10768	282 aa		10	□□□□□ -0.81
PMP22-208	ENST00000580584	POLR2K	P53803	58 aa	Known RBP	10	□□□□□ -0.81
PMP22-208	ENST00000580584	SMDT1	Q9H4I9	107 aa		10	□□□□□ -0.81
PMP22-208	ENST00000580584	TRBV27	A0A0K0K1C4	114 aa		9.99	□□□□□ -0.81
PMP22-208	ENST00000580584	CAMP	P49913	170 aa		9.99	□□□□□ -0.81
PMP22-208	ENST00000580584	C15orf56	Q8N910	161 aa		9.99	□□□□□ -0.81
PMP22-208	ENST00000580584	NRAC	Q8N912	160 aa		9.99	□□□□□ -0.81
PMP22-208	ENST00000580584	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	9.99	□□□□□ -0.81
PMP22-208	ENST00000580584	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	9.99	□□□□□ -0.81
PMP22-208	ENST00000580584	PANO1	I0J062	215 aa		9.98	□□□□□ -0.81
PMP22-208	ENST00000580584	SLPI	P03973	132 aa		9.98	□□□□□ -0.81
PMP22-208	ENST00000580584	ZNF25	P17030	456 aa	Predicted RBP	9.98	□□□□□ -0.81
PMP22-208	ENST00000580584	CNBP	P62633	177 aa	Known RBP	9.98	□□□□□ -0.81
PMP22-208	ENST00000580584	MRPL51	Q4U2R6	128 aa	Known RBP	9.98	□□□□□ -0.81
PMP22-208	ENST00000580584	TMEM101	Q96IK0	257 aa		9.98	□□□□□ -0.81
PMP22-208	ENST00000580584	BTF3L4	Q96K17	158 aa		9.98	□□□□□ -0.81
PMP22-208	ENST00000580584	C7orf77	A4D0Y5	90 aa		9.97	□□□□□ -0.81
PMP22-208	ENST00000580584	HIGD2B	Q4VC39	106 aa		9.97	□□□□□ -0.81
PMP22-208	ENST00000580584	FAM104B	Q5XKR9	115 aa		9.97	□□□□□ -0.81
PMP22-208	ENST00000580584	MRPL54	Q6P161	138 aa	Known RBP	9.97	□□□□□ -0.81
PMP22-208	ENST00000580584	SDIM1	Q6ZPB5	146 aa		9.97	□□□□□ -0.81
PMP22-208	ENST00000580584	OR5A1	Q8NGJ0	315 aa		9.97	□□□□□ -0.81
PMP22-208	ENST00000580584	AP5S1	Q9NUS5	200 aa		9.97	□□□□□ -0.81
PMP22-208	ENST00000580584	FCER1G	P30273	86 aa		9.96	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms