RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CAMK2N2Q96S95 79 aa8.02□□□□□ -1.13
CSNK1D-213ENST00000580446 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.01□□□□□ -1.13
CSNK1D-213ENST00000580446 A0A1W2PPV4 95 aa8.01□□□□□ -1.13
CSNK1D-213ENST00000580446 IGKV2-29A2NJV5 120 aaPredicted RBP8.01□□□□□ -1.13
CSNK1D-213ENST00000580446 TSHBP01222 138 aa8.01□□□□□ -1.13
CSNK1D-213ENST00000580446 AMMECR1LQ6DCA0 310 aa8.01□□□□□ -1.13
CSNK1D-213ENST00000580446 SUMO4Q6EEV6 95 aa8.01□□□□□ -1.13
CSNK1D-213ENST00000580446 LINC01559Q495D7 138 aa8□□□□□ -1.13
CSNK1D-213ENST00000580446 ISOC2Q96AB3 205 aa8□□□□□ -1.13
CSNK1D-213ENST00000580446 SEC22CQ9BRL7 303 aa8□□□□□ -1.13
CSNK1D-213ENST00000580446 SMIM3Q9BZL3 60 aa8□□□□□ -1.13
CSNK1D-213ENST00000580446 V9GYH0 126 aa8□□□□□ -1.13
CSNK1D-213ENST00000580446 ZNF861PO60384 105 aa7.99□□□□□ -1.13
CSNK1D-213ENST00000580446 SEC61BP60468 96 aaKnown RBP7.99□□□□□ -1.13
CSNK1D-213ENST00000580446 IL15RAQ13261 267 aa7.99□□□□□ -1.13
CSNK1D-213ENST00000580446 SPANXN1Q5VSR9 72 aa7.99□□□□□ -1.13
CSNK1D-213ENST00000580446 A6NHS1 94 aa7.98□□□□□ -1.13
CSNK1D-213ENST00000580446 M0QXV9 152 aa7.98□□□□□ -1.13
CSNK1D-213ENST00000580446 M0R2T5 61 aa7.98□□□□□ -1.13
CSNK1D-213ENST00000580446 SMIM17P0DL12 118 aa7.98□□□□□ -1.13
CSNK1D-213ENST00000580446 GCHFRP30047 84 aa7.98□□□□□ -1.13
CSNK1D-213ENST00000580446 KRTAP13-3Q3SY46 172 aa7.98□□□□□ -1.13
CSNK1D-213ENST00000580446 LINC00959A0A1B0GUT2 108 aa7.97□□□□□ -1.13
CSNK1D-213ENST00000580446 BCL2L11O43521 198 aa7.97□□□□□ -1.13
CSNK1D-213ENST00000580446 BTCP35070 178 aa7.97□□□□□ -1.13
CSNK1D-213ENST00000580446 COTL1Q14019 142 aa7.97□□□□□ -1.13
CSNK1D-213ENST00000580446 TSKUQ8WUA8 353 aa7.97□□□□□ -1.13
CSNK1D-213ENST00000580446 RNF151Q2KHN1 245 aa7.96□□□□□ -1.14
CSNK1D-213ENST00000580446 ATP6V1G2O95670 118 aa7.95□□□□□ -1.14
CSNK1D-213ENST00000580446 DEFA1P59665 94 aa7.95□□□□□ -1.14
CSNK1D-213ENST00000580446 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
CSNK1D-213ENST00000580446 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
CSNK1D-213ENST00000580446 PEX7O00628 323 aa7.94□□□□□ -1.14
CSNK1D-213ENST00000580446 UBE2G2P60604 165 aa7.94□□□□□ -1.14
CSNK1D-213ENST00000580446 Q6ZNX1 250 aa7.94□□□□□ -1.14
CSNK1D-213ENST00000580446 SCGB1C1Q8TD33 95 aa7.94□□□□□ -1.14
CSNK1D-213ENST00000580446 PGLYRP4Q96LB8 373 aa7.94□□□□□ -1.14
CSNK1D-213ENST00000580446 AP1S3Q96PC3 154 aa7.94□□□□□ -1.14
CSNK1D-213ENST00000580446 MACF1Q9UPN3 7388 aaKnown RBP7.94□□□□□ -1.14
CSNK1D-213ENST00000580446 H0YIZ8 118 aa7.93□□□□□ -1.14
CSNK1D-213ENST00000580446 SIX6O95475 246 aa7.93□□□□□ -1.14
CSNK1D-213ENST00000580446 STAG3L2P0CL84 134 aa7.93□□□□□ -1.14
CSNK1D-213ENST00000580446 STAG3L3P0CL85 134 aa7.93□□□□□ -1.14
CSNK1D-213ENST00000580446 MALP21145 153 aa7.93□□□□□ -1.14
CSNK1D-213ENST00000580446 CDC34P49427 236 aaPredicted RBP7.93□□□□□ -1.14
CSNK1D-213ENST00000580446 RASL11AQ6T310 242 aa7.92□□□□□ -1.14
CSNK1D-213ENST00000580446 WFDC1Q9HC57 220 aa7.92□□□□□ -1.14
CSNK1D-213ENST00000580446 C19orf71A6NCJ1 209 aa7.91□□□□□ -1.14
CSNK1D-213ENST00000580446 SNAI2O43623 268 aa7.91□□□□□ -1.14
CSNK1D-213ENST00000580446 CD164L2Q6UWJ8 174 aa7.91□□□□□ -1.14
CSNK1D-213ENST00000580446 DEDD2Q8WXF8 326 aa7.91□□□□□ -1.14
CSNK1D-213ENST00000580446 RAB24Q969Q5 203 aa7.91□□□□□ -1.14
CSNK1D-213ENST00000580446 CTDSP1Q9GZU7 261 aa7.91□□□□□ -1.14
CSNK1D-213ENST00000580446 RBM38Q9H0Z9 239 aaKnown RBP7.91□□□□□ -1.14
CSNK1D-213ENST00000580446 NAP1L6A6NFF2 107 aa7.9□□□□□ -1.14
CSNK1D-213ENST00000580446 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
CSNK1D-213ENST00000580446 KRTAP4-16G5E9R7 235 aaPredicted RBP7.89□□□□□ -1.15
CSNK1D-213ENST00000580446 SPAG11BQ08648 103 aa7.89□□□□□ -1.15
CSNK1D-213ENST00000580446 SS18Q15532 418 aa7.89□□□□□ -1.15
CSNK1D-213ENST00000580446 LINC00242Q5T6M2 205 aa7.89□□□□□ -1.15
CSNK1D-213ENST00000580446 TPPP3Q9BW30 176 aa7.89□□□□□ -1.15
CSNK1D-213ENST00000580446 NTF3P20783 257 aa7.88□□□□□ -1.15
CSNK1D-213ENST00000580446 COX8CQ7Z4L0 72 aa7.88□□□□□ -1.15
CSNK1D-213ENST00000580446 C5orf38Q86SI9 138 aa7.88□□□□□ -1.15
CSNK1D-213ENST00000580446 C2orf48Q96LS8 159 aa7.88□□□□□ -1.15
CSNK1D-213ENST00000580446 NIT2Q9NQR4 276 aa7.88□□□□□ -1.15
CSNK1D-213ENST00000580446 COX7A2LO14548 114 aa7.87□□□□□ -1.15
CSNK1D-213ENST00000580446 OR5AL1P0C617 328 aa7.87□□□□□ -1.15
CSNK1D-213ENST00000580446 TRIQKQ629K1 86 aa7.87□□□□□ -1.15
CSNK1D-213ENST00000580446 MED28Q9H204 178 aa7.87□□□□□ -1.15
CSNK1D-213ENST00000580446 ZFP30Q9Y2G7 519 aa7.87□□□□□ -1.15
CSNK1D-213ENST00000580446 HSPB11Q9Y547 144 aa7.87□□□□□ -1.15
CSNK1D-213ENST00000580446 UBE2G1P62253 170 aa7.86□□□□□ -1.15
CSNK1D-213ENST00000580446 KRTAP19-1Q8IUB9 90 aa7.86□□□□□ -1.15
CSNK1D-213ENST00000580446 ESDP10768 282 aa7.85□□□□□ -1.15
CSNK1D-213ENST00000580446 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
CSNK1D-213ENST00000580446 TMEM167BQ9NRX6 74 aa7.85□□□□□ -1.15
CSNK1D-213ENST00000580446 A0A1W2PRE2 83 aa7.84□□□□□ -1.15
CSNK1D-213ENST00000580446 CXorf1O96002 111 aa7.84□□□□□ -1.15
CSNK1D-213ENST00000580446 LTAP01374 205 aa7.84□□□□□ -1.15
CSNK1D-213ENST00000580446 APCSP02743 223 aa7.84□□□□□ -1.15
CSNK1D-213ENST00000580446 UNQ6190/PRO20217Q6UXQ8 127 aa7.84□□□□□ -1.15
CSNK1D-213ENST00000580446 OR2D3Q8NGH3 330 aa7.84□□□□□ -1.15
CSNK1D-213ENST00000580446 TMEM101Q96IK0 257 aa7.84□□□□□ -1.15
CSNK1D-213ENST00000580446 BTF3L4Q96K17 158 aa7.84□□□□□ -1.15
CSNK1D-213ENST00000580446 C6orf48Q9UBA6 75 aa7.84□□□□□ -1.15
CSNK1D-213ENST00000580446 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
CSNK1D-213ENST00000580446 RPL39LQ96EH5 51 aaKnown RBP7.83□□□□□ -1.16
CSNK1D-213ENST00000580446 FMC1Q96HJ9 113 aa7.83□□□□□ -1.16
CSNK1D-213ENST00000580446 SMDT1Q9H4I9 107 aa7.83□□□□□ -1.16
CSNK1D-213ENST00000580446 IGKV2D-26A0A0A0MRZ7 120 aa7.82□□□□□ -1.16
CSNK1D-213ENST00000580446 RPL28P46779 137 aaKnown RBP7.82□□□□□ -1.16
CSNK1D-213ENST00000580446 FP248Q71RG6 208 aaPredicted RBP7.82□□□□□ -1.16
CSNK1D-213ENST00000580446 IMMP2LQ96T52 175 aa7.82□□□□□ -1.16
CSNK1D-213ENST00000580446 NUDT15Q9NV35 164 aa7.82□□□□□ -1.16
CSNK1D-213ENST00000580446 MRPL35Q9NZE8 188 aaKnown RBP7.82□□□□□ -1.16
CSNK1D-213ENST00000580446 C3orf22Q8N5N4 141 aa7.81□□□□□ -1.16
CSNK1D-213ENST00000580446 HIST1H2BAQ96A08 127 aa7.81□□□□□ -1.16
CSNK1D-213ENST00000580446 FAM74A7A6NL05 159 aa7.8□□□□□ -1.16
CSNK1D-213ENST00000580446 CENPXA8MT69 81 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms