RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 GAGE6Q13070 117 aa10.95□□□□□ -0.66
IFT20-210ENST00000580357 MPV17L2Q567V2 206 aa10.95□□□□□ -0.66
IFT20-210ENST00000580357 AMN1Q8IY45 258 aa10.95□□□□□ -0.66
IFT20-210ENST00000580357 RPL39LQ96EH5 51 aaKnown RBP10.95□□□□□ -0.66
IFT20-210ENST00000580357 RNF185Q96GF1 192 aa10.95□□□□□ -0.66
IFT20-210ENST00000580357 FAT2Q9NYQ8 4349 aa10.94□□□□□ -0.66
IFT20-210ENST00000580357 H7C423 109 aa10.94□□□□□ -0.66
IFT20-210ENST00000580357 I3L3M4 83 aa10.94□□□□□ -0.66
IFT20-210ENST00000580357 KRTAP10-2P60368 255 aa10.94□□□□□ -0.66
IFT20-210ENST00000580357 FAM104BQ5XKR9 115 aa10.94□□□□□ -0.66
IFT20-210ENST00000580357 IGKV2D-24A0A075B6R9 120 aa10.93□□□□□ -0.66
IFT20-210ENST00000580357 TMEM218A2RU14 115 aa10.93□□□□□ -0.66
IFT20-210ENST00000580357 CAMPP49913 170 aa10.93□□□□□ -0.66
IFT20-210ENST00000580357 HBBP68871 147 aa10.93□□□□□ -0.66
IFT20-210ENST00000580357 MIAQ16674 131 aa10.93□□□□□ -0.66
IFT20-210ENST00000580357 ENHOQ6UWT2 76 aa10.93□□□□□ -0.66
IFT20-210ENST00000580357 ATP5L2Q7Z4Y8 100 aa10.93□□□□□ -0.66
IFT20-210ENST00000580357 NTN5Q8WTR8 489 aaPredicted RBP10.93□□□□□ -0.66
IFT20-210ENST00000580357 C1orf43Q9BWL3 253 aa10.93□□□□□ -0.66
IFT20-210ENST00000580357 Q8N976 141 aa10.92□□□□□ -0.66
IFT20-210ENST00000580357 PRR34Q9NV39 138 aa10.92□□□□□ -0.66
IFT20-210ENST00000580357 VCYO14598 125 aa10.91□□□□□ -0.66
IFT20-210ENST00000580357 APCSP02743 223 aa10.91□□□□□ -0.66
IFT20-210ENST00000580357 POLR2KP53803 58 aaKnown RBP10.91□□□□□ -0.66
IFT20-210ENST00000580357 TMEM70Q9BUB7 260 aa10.91□□□□□ -0.66
IFT20-210ENST00000580357 TRAV8-4A0A0B4J246 113 aa10.9□□□□□ -0.66
IFT20-210ENST00000580357 TRBV27A0A0K0K1C4 114 aa10.9□□□□□ -0.66
IFT20-210ENST00000580357 MRPL54Q6P161 138 aaKnown RBP10.9□□□□□ -0.66
IFT20-210ENST00000580357 LINC00269Q8N2A0 174 aa10.9□□□□□ -0.66
IFT20-210ENST00000580357 Q8N814 137 aa10.9□□□□□ -0.66
IFT20-210ENST00000580357 SEC11CQ9BY50 192 aa10.9□□□□□ -0.66
IFT20-210ENST00000580357 A0A1B0GXF2 115 aa10.89□□□□□ -0.67
IFT20-210ENST00000580357 CDK2AP2O75956 126 aa10.89□□□□□ -0.67
IFT20-210ENST00000580357 PPBPP02775 128 aa10.89□□□□□ -0.67
IFT20-210ENST00000580357 CKS2P33552 79 aa10.89□□□□□ -0.67
IFT20-210ENST00000580357 MRPL51Q4U2R6 128 aaKnown RBP10.89□□□□□ -0.67
IFT20-210ENST00000580357 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
IFT20-210ENST00000580357 PKD1P98161 4303 aa10.88□□□□□ -0.67
IFT20-210ENST00000580357 TRBV24-1A0A075B6N3 115 aa10.88□□□□□ -0.67
IFT20-210ENST00000580357 TCAPO15273 167 aa10.88□□□□□ -0.67
IFT20-210ENST00000580357 REG3AQ06141 175 aa10.88□□□□□ -0.67
IFT20-210ENST00000580357 C14orf177Q52M58 125 aa10.88□□□□□ -0.67
IFT20-210ENST00000580357 AMMECR1LQ6DCA0 310 aa10.88□□□□□ -0.67
IFT20-210ENST00000580357 COMMD7Q86VX2 200 aa10.88□□□□□ -0.67
IFT20-210ENST00000580357 IMMP2LQ96T52 175 aa10.88□□□□□ -0.67
IFT20-210ENST00000580357 CTDSP1Q9GZU7 261 aa10.88□□□□□ -0.67
IFT20-210ENST00000580357 GAS8-AS1O95177 125 aa10.87□□□□□ -0.67
IFT20-210ENST00000580357 ZNF25P17030 456 aaPredicted RBP10.87□□□□□ -0.67
IFT20-210ENST00000580357 RPS10P46783 165 aaKnown RBP10.87□□□□□ -0.67
IFT20-210ENST00000580357 SUMO2P61956 95 aaKnown RBP10.87□□□□□ -0.67
IFT20-210ENST00000580357 SMAGPQ0VAQ4 97 aa10.87□□□□□ -0.67
IFT20-210ENST00000580357 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
IFT20-210ENST00000580357 C20orf203Q8NBC4 194 aa10.87□□□□□ -0.67
IFT20-210ENST00000580357 DEFB104AQ8WTQ1 72 aa10.87□□□□□ -0.67
IFT20-210ENST00000580357 BAALCQ8WXS3 180 aa10.87□□□□□ -0.67
IFT20-210ENST00000580357 BTF3L4Q96K17 158 aa10.87□□□□□ -0.67
IFT20-210ENST00000580357 KIR2DL4Q99706 377 aa10.87□□□□□ -0.67
IFT20-210ENST00000580357 IGLV4-60A0A075B6I1 120 aa10.86□□□□□ -0.67
IFT20-210ENST00000580357 IGLV5-52A0A0A0MRZ9 124 aa10.86□□□□□ -0.67
IFT20-210ENST00000580357 PHOX2AO14813 284 aa10.86□□□□□ -0.67
IFT20-210ENST00000580357 GCSHP23434 173 aa10.86□□□□□ -0.67
IFT20-210ENST00000580357 RPL32P62910 135 aaKnown RBP10.86□□□□□ -0.67
IFT20-210ENST00000580357 NRACQ8N912 160 aa10.86□□□□□ -0.67
IFT20-210ENST00000580357 TMEM101Q96IK0 257 aa10.86□□□□□ -0.67
IFT20-210ENST00000580357 SMKR1H3BMG3 65 aa10.85□□□□□ -0.67
IFT20-210ENST00000580357 TSHBP01222 138 aa10.85□□□□□ -0.67
IFT20-210ENST00000580357 ESDP10768 282 aa10.85□□□□□ -0.67
IFT20-210ENST00000580357 FCER1GP30273 86 aa10.85□□□□□ -0.67
IFT20-210ENST00000580357 FGF6P10767 208 aa10.84□□□□□ -0.67
IFT20-210ENST00000580357 RNASEKQ6P5S7 137 aaKnown RBP10.84□□□□□ -0.67
IFT20-210ENST00000580357 TMEM18Q96B42 140 aa10.84□□□□□ -0.67
IFT20-210ENST00000580357 TMEM242Q9NWH2 141 aa10.84□□□□□ -0.67
IFT20-210ENST00000580357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.83□□□□□ -0.68
IFT20-210ENST00000580357 IGKV2-29A2NJV5 120 aaPredicted RBP10.83□□□□□ -0.68
IFT20-210ENST00000580357 TNFRSF6BO95407 300 aa10.83□□□□□ -0.68
IFT20-210ENST00000580357 ADCYAP1P18509 176 aa10.83□□□□□ -0.68
IFT20-210ENST00000580357 TMEM136Q6ZRR5 245 aa10.83□□□□□ -0.68
IFT20-210ENST00000580357 ORMDL3Q8N138 153 aa10.83□□□□□ -0.68
IFT20-210ENST00000580357 PKHD1P08F94 4074 aa10.83□□□□□ -0.68
IFT20-210ENST00000580357 TRAV9-1A0A075B6T8 112 aa10.82□□□□□ -0.68
IFT20-210ENST00000580357 C7orf77A4D0Y5 90 aa10.82□□□□□ -0.68
IFT20-210ENST00000580357 D6R8Y8 96 aa10.82□□□□□ -0.68
IFT20-210ENST00000580357 LECT2O14960 151 aa10.82□□□□□ -0.68
IFT20-210ENST00000580357 CLPSL2Q6UWE3 100 aa10.82□□□□□ -0.68
IFT20-210ENST00000580357 MRPL52Q86TS9 123 aaKnown RBP10.82□□□□□ -0.68
IFT20-210ENST00000580357 LAMTOR2Q9Y2Q5 125 aa10.82□□□□□ -0.68
IFT20-210ENST00000580357 WFDC2Q14508 124 aa10.81□□□□□ -0.68
IFT20-210ENST00000580357 C10orf91Q5T1B1 145 aa10.81□□□□□ -0.68
IFT20-210ENST00000580357 HLA-DQA1P01909 254 aa10.8□□□□□ -0.68
IFT20-210ENST00000580357 S100PP25815 95 aa10.8□□□□□ -0.68
IFT20-210ENST00000580357 FUSP35637 526 aaKnown RBP eCLIP10.8□□□□□ -0.68
IFT20-210ENST00000580357 DGAT2L7PQ6IED9 249 aa10.8□□□□□ -0.68
IFT20-210ENST00000580357 KRTAP26-1Q6PEX3 210 aa10.8□□□□□ -0.68
IFT20-210ENST00000580357 CLRN3Q8NCR9 226 aa10.8□□□□□ -0.68
IFT20-210ENST00000580357 OR5A1Q8NGJ0 315 aa10.8□□□□□ -0.68
IFT20-210ENST00000580357 PRELID3AQ96N28 172 aa10.8□□□□□ -0.68
IFT20-210ENST00000580357 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
IFT20-210ENST00000580357 PRSS47A8MTI9 375 aa10.79□□□□□ -0.68
IFT20-210ENST00000580357 SMIM2Q9BVW6 85 aa10.79□□□□□ -0.68
IFT20-210ENST00000580357 CARHSP1Q9Y2V2 147 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms